Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20136
         (694 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   3.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.1  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   7.2  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = -1

Query: 313 FGIETSLIYTMLCIVLKLWMYSSFRSI*II--IWHLP 209
           FG  T  +  M+ +  +L+ +SSF  I ++  +W  P
Sbjct: 531 FGFITKQLIFMIFVTYQLYCWSSFLKISVLQSLWASP 567


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = -2

Query: 453 YFLLLLAVIR*SCFFILFT*YLTLA---KI*HAHTFFDHCIVDYHSRHI 316
           + L LL +    C FI+FT +L         + H  F  C+ DY + H+
Sbjct: 159 HLLFLLCIYHFFCAFIIFTMHLLFCCAFIFFNMHLLFLLCL-DYFTLHL 206


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 559 FYLCVFVVNVNKIMIRC 609
           +YL +FV+NV  ++  C
Sbjct: 100 YYLLLFVINVLYVLTLC 116


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,018
Number of Sequences: 336
Number of extensions: 3261
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)