Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20135
         (661 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_44890| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.1  
SB_42680| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)                 29   3.4  
SB_29130| Best HMM Match : Vicilin_N (HMM E-Value=0.17)                29   3.4  
SB_17592| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.9  
SB_13771| Best HMM Match : 7tm_1 (HMM E-Value=0)                       28   5.9  
SB_3044| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   7.7  

>SB_44890| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1109

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 22/77 (28%), Positives = 37/77 (48%)
 Frame = +2

Query: 86  TDLRGQEERSHHKCRKQTHTKQQDELHGVRLPALDARLQGYRPGVLPC*VHTYFRRNNIK 265
           + L+ + +   HK +  T ++QQD      + +L+ +L+  R   L     T  R +  +
Sbjct: 762 SQLKAENDSLQHKIQSLTSSRQQDR---SAISSLERKLKSERDARLL--AETQLRED--R 814

Query: 266 LMYKRDGLALTLRDDSN 316
             YK +G A   RDDSN
Sbjct: 815 KRYKAEGAAAKQRDDSN 831


>SB_42680| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
          Length = 700

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = -1

Query: 448 QILITLSVHNLEVDLVVLPQRNELPADFWTRLVLAIAVGKSAIVVAV 308
           Q+ ITLS H+ +V +  L   +         +V+ + VG +A+ VAV
Sbjct: 62  QVSITLSAHSSQVSITTLAHTSTAVVVAIVVVVVIVVVGGAAVAVAV 108


>SB_29130| Best HMM Match : Vicilin_N (HMM E-Value=0.17)
          Length = 355

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +1

Query: 310 QQQRWQTCLRRWQGQDESKSQLEVRSSVGEQQ 405
           QQQ+WQ   R+WQ Q   +SQLE +    E Q
Sbjct: 301 QQQQWQQQQRQWQ-QQLQQSQLEQQQRQQEMQ 331


>SB_17592| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3592

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -1

Query: 262  NVVSAKISVNSTGKHSRTISLEPCIQSW 179
            +VV  K++V+S GKH+  +S +  + SW
Sbjct: 2464 HVVVRKVAVHSGGKHAMALSADGDVYSW 2491


>SB_13771| Best HMM Match : 7tm_1 (HMM E-Value=0)
          Length = 575

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 13/49 (26%), Positives = 26/49 (53%)
 Frame = -1

Query: 382 ELPADFWTRLVLAIAVGKSAIVVAVIAQRQSKTVALVHQLNVVSAKISV 236
           E+    +  + L  AVG S + + ++ +R+ KTV     LN+  A +++
Sbjct: 30  EIKLTLYVIIFLISAVGNSLVCIVILRRRRMKTVTNYFVLNLAIADLAL 78


>SB_3044| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1170

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 15/43 (34%), Positives = 19/43 (44%)
 Frame = +1

Query: 400  QQGLLQDCEHSA*SVFDVVS*NNPDPKPHGLRGQQRQGFKAQW 528
            +  L Q  +H   SVF VV  + P+PK   L       F A W
Sbjct: 1007 ETNLRQHRDHDPNSVFQVVGYDKPEPKSAALIDGVHTDFLASW 1049


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,185,157
Number of Sequences: 59808
Number of extensions: 335133
Number of successful extensions: 1150
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1149
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1693527500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)