BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20135
(661 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT022576-1|AAY54992.1| 657|Drosophila melanogaster IP11918p pro... 29 5.6
BT022512-1|AAY54928.1| 420|Drosophila melanogaster IP11818p pro... 29 5.6
AE014296-955|AAF50778.2| 1175|Drosophila melanogaster CG4835-PA ... 29 5.6
AE014135-125|AAF59320.2| 628|Drosophila melanogaster CG11360-PA... 29 5.6
AE014298-3010|AAF50913.2| 4899|Drosophila melanogaster CG11734-P... 29 7.4
AE013599-118|AAF57301.2| 1976|Drosophila melanogaster CG14470-PA... 29 7.4
>BT022576-1|AAY54992.1| 657|Drosophila melanogaster IP11918p
protein.
Length = 657
Score = 29.1 bits (62), Expect = 5.6
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +3
Query: 21 LEDDLYNSILVADYDNAVEKSKQIYEDKKSEVITNVVN--KLIRNNKM-NCME 170
L DDL + IL + Y N+V S Q Y + + + NV N KL++ + NC +
Sbjct: 364 LNDDLNSEILSSIYKNSV-PSTQEYANNSMKTVVNVSNSVKLVQGHHTGNCFQ 415
>BT022512-1|AAY54928.1| 420|Drosophila melanogaster IP11818p
protein.
Length = 420
Score = 29.1 bits (62), Expect = 5.6
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +3
Query: 21 LEDDLYNSILVADYDNAVEKSKQIYEDKKSEVITNVVN--KLIRNNKM-NCME 170
L DDL + IL + Y N+V S Q Y + + + NV N KL++ + NC +
Sbjct: 127 LNDDLNSEILSSIYKNSV-PSTQEYANNSMKTVVNVSNSVKLVQGHHTGNCFQ 178
>AE014296-955|AAF50778.2| 1175|Drosophila melanogaster CG4835-PA
protein.
Length = 1175
Score = 29.1 bits (62), Expect = 5.6
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = +1
Query: 13 TPNSKTIFTTASSLPITTMPLKKANRSTRTRRAKSSQMS*TNSYETTR*TAWSTPTS 183
TP T+ T ASS P+TT+ + T A +++MS T TT T ST T+
Sbjct: 923 TPGLTTLSTEASSTPVTTV--------STTPEATTTEMSTTPKTTTTESTTISTTTT 971
>AE014135-125|AAF59320.2| 628|Drosophila melanogaster CG11360-PA
protein.
Length = 628
Score = 29.1 bits (62), Expect = 5.6
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +3
Query: 21 LEDDLYNSILVADYDNAVEKSKQIYEDKKSEVITNVVN--KLIRNNKM-NCME 170
L DDL + IL + Y N+V S Q Y + + + NV N KL++ + NC +
Sbjct: 335 LNDDLNSEILSSIYKNSV-PSTQEYANNSMKTVVNVSNSVKLVQGHHTGNCFQ 386
>AE014298-3010|AAF50913.2| 4899|Drosophila melanogaster CG11734-PB
protein.
Length = 4899
Score = 28.7 bits (61), Expect = 7.4
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
Frame = -1
Query: 283 VALVHQLNV----VSAKISVNSTGKHSRTISLEPCIQSW 179
V L HQL V V K++V+S GKH+ ++L+ + SW
Sbjct: 3059 VPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSW 3097
>AE013599-118|AAF57301.2| 1976|Drosophila melanogaster CG14470-PA
protein.
Length = 1976
Score = 28.7 bits (61), Expect = 7.4
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +1
Query: 4 QXPTPNSKTIFTTASSLPITTMPLKKANRSTRTRRAKSS 120
+ P P + TT + P +T P KK + TRT SS
Sbjct: 302 EEPVPATTESTTTTTQAPASTTPKKKKRKPTRTPGTGSS 340
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,206,063
Number of Sequences: 53049
Number of extensions: 505749
Number of successful extensions: 1905
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1905
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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