Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20129
(671 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 129 3e-31
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 111 1e-25
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 94 2e-20
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 93 4e-20
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 91 1e-19
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 84 2e-17
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 75 9e-15
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 71 1e-13
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 37 0.003
SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo... 29 0.61
SPAC10F6.12c |mam4||protein-S isoprenylcysteine O-methyltransfer... 27 2.5
SPAC22H10.11c ||||Schizosaccharomyces pombe|chr 1|||Manual 25 7.5
SPAC31A2.06 |||conserved fungal protein|Schizosaccharomyces pomb... 25 7.5
SPCC1322.05c |||leukotriene A-4 hydrolase |Schizosaccharomyces p... 25 9.9
SPAC18G6.05c |||translation elongation regulator Gcn1 |Schizosac... 25 9.9
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 129 bits (312), Expect = 3e-31
Identities = 60/82 (73%), Positives = 72/82 (87%)
Frame = +3
Query: 255 KMIQAANGEVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGAFLD 434
KMIQ GEV +TNDGATILK +SV+HPAAKMLV+LS AQD+EAGDGTTSVV++AG+ L
Sbjct: 46 KMIQTGKGEVILTNDGATILKHLSVLHPAAKMLVDLSAAQDVEAGDGTTSVVILAGSMLA 105
Query: 435 SAEKLLQKGIHPTVISDGFQKA 500
AEKLL+KGIHPTVI++ FQ+A
Sbjct: 106 CAEKLLKKGIHPTVIAESFQRA 127
Score = 58.4 bits (135), Expect = 9e-10
Identities = 25/61 (40%), Positives = 44/61 (72%)
Frame = +2
Query: 488 FPKSPSIALQVVENMSTPVDLNNEDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAVME 667
F ++ + ++ + ++L++ ++LL+AA TSLNSK+VSQ+S +LAPIAV A+ V++
Sbjct: 124 FQRAAGFTVDCMKENALAIELSDRESLLRAATTSLNSKIVSQYSNLLAPIAVDAVLKVID 183
Query: 668 P 670
P
Sbjct: 184 P 184
Score = 56.4 bits (130), Expect = 4e-09
Identities = 23/36 (63%), Positives = 33/36 (91%)
Frame = +1
Query: 151 YKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMER 258
++D+ KP ++RLSNI AA++VADAIRTSLGP+GM++
Sbjct: 11 FQDREKPQEVRLSNIMAARSVADAIRTSLGPKGMDK 46
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 111 bits (266), Expect = 1e-25
Identities = 51/85 (60%), Positives = 68/85 (80%)
Frame = +3
Query: 255 KMIQAANGEVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGAFLD 434
K++ + +GE+T+TNDGATIL QM V H AK+LV+LS++QD E GDGTT VVV+AGA L+
Sbjct: 61 KILISPDGEITVTNDGATILDQMEVEHQIAKLLVQLSKSQDDEIGDGTTGVVVLAGALLE 120
Query: 435 SAEKLLQKGIHPTVISDGFQKALQL 509
AE L+ KGIHP I+DG++KA Q+
Sbjct: 121 QAEALIDKGIHPIRIADGYEKACQV 145
Score = 35.9 bits (79), Expect = 0.005
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Frame = +2
Query: 488 FPKSPSIALQVVENMSTPVDLNNEDA--LLKAAATSLNSKVVSQHSTILAPIAVQAIRAV 661
+ K+ +A++ ++ +S VD + E+ L ++A TSL SKVVS+ A IAV A+ +V
Sbjct: 139 YEKACQVAVKHLDAISDVVDFSPENTTNLFRSAKTSLGSKVVSKAHDHFANIAVDAVLSV 198
Query: 662 ME 667
+
Sbjct: 199 AD 200
Score = 33.9 bits (74), Expect = 0.021
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +1
Query: 187 SNINAAKAVADAIRTSLGPRGMER 258
S+I A K VA+ +RTSLGPRG+++
Sbjct: 38 SHILATKTVANIVRTSLGPRGLDK 61
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 93.9 bits (223), Expect = 2e-20
Identities = 44/85 (51%), Positives = 60/85 (70%)
Frame = +3
Query: 255 KMIQAANGEVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGAFLD 434
K++ GEV I+NDGATI+K + ++HPAAK LV+++RAQD E GDGTTSVVV AG L
Sbjct: 51 KLMVDDRGEVVISNDGATIMKLLDIVHPAAKTLVDIARAQDAEVGDGTTSVVVFAGELLR 110
Query: 435 SAEKLLQKGIHPTVISDGFQKALQL 509
A ++ G+ +I G++KA QL
Sbjct: 111 EARTFVEDGVSSHLIIRGYRKAAQL 135
Score = 35.9 bits (79), Expect = 0.005
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +1
Query: 157 DKSKPTDIRLSNINAAKAVADAIRTSLGPRGMER 258
D S+ LSNINA AV D IRT+LGP G ++
Sbjct: 18 DDSQGRGQLLSNINACVAVQDTIRTTLGPLGADK 51
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 92.7 bits (220), Expect = 4e-20
Identities = 45/84 (53%), Positives = 60/84 (71%)
Frame = +3
Query: 255 KMIQAANGEVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGAFLD 434
KM+ G+VT+TNDGATIL + V HPA K+LVEL++ QD E GDGTTSVV+IA L
Sbjct: 48 KMLVDDIGDVTVTNDGATILSLLDVEHPAGKVLVELAQQQDKEVGDGTTSVVIIAAELLR 107
Query: 435 SAEKLLQKGIHPTVISDGFQKALQ 506
A +L++ IHPT I G++ A++
Sbjct: 108 RANELVKNKIHPTTIITGYRLAIR 131
Score = 32.3 bits (70), Expect = 0.065
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +1
Query: 157 DKSKPTDIRLSNINAAKAVADAIRTSLGPRGMER 258
+K D+R N+ A A+A+ +++SLGP G+++
Sbjct: 15 EKISGEDVRNQNVLATTAIANVVKSSLGPVGLDK 48
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 91.5 bits (217), Expect = 1e-19
Identities = 42/84 (50%), Positives = 59/84 (70%)
Frame = +3
Query: 255 KMIQAANGEVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGAFLD 434
KM+ G V +TNDG IL+++ V HPAAK ++EL+R QD E GDGTTSV+++AG L
Sbjct: 46 KMLLDPVGSVLLTNDGHAILREIEVAHPAAKSMIELARTQDEEVGDGTTSVIILAGEILA 105
Query: 435 SAEKLLQKGIHPTVISDGFQKALQ 506
+A LL + IHP V+ F++AL+
Sbjct: 106 AASPLLDRKIHPVVMIRSFKQALE 129
Score = 39.9 bits (89), Expect = 3e-04
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +1
Query: 181 RLSNINAAKAVADAIRTSLGPRGMER*FKQPM 276
++SNI AAKAVAD IRT LGPR M + P+
Sbjct: 21 QMSNIQAAKAVADVIRTCLGPRAMLKMLLDPV 52
Score = 35.1 bits (77), Expect = 0.009
Identities = 13/58 (22%), Positives = 37/58 (63%)
Frame = +2
Query: 488 FPKSPSIALQVVENMSTPVDLNNEDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAV 661
F ++ AL +++ ++ PV++++ + + T + +K+V++ S ++ +A++A+R V
Sbjct: 124 FKQALEDALSIIDEITLPVNVDDNAEMFRLIRTCIGTKLVARWSDLMCHLALRAVRTV 181
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 83.8 bits (198), Expect = 2e-17
Identities = 41/83 (49%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Frame = +3
Query: 255 KMIQA-ANGEVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGAFL 431
K++Q+ ++G++ +TNDGATILK +++ + AAK+LV +S+ QD E GDGTTSV V A L
Sbjct: 47 KILQSNSSGDIVVTNDGATILKSIALDNAAAKVLVNISKVQDDEVGDGTTSVCVFAAELL 106
Query: 432 DSAEKLLQKGIHPTVISDGFQKA 500
AE ++ IHP VI DG++ A
Sbjct: 107 RQAEIMVNAKIHPQVIIDGYRIA 129
Score = 30.7 bits (66), Expect = 0.20
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +1
Query: 181 RLSNINAAKAVADAIRTSLGPRGMER 258
RLS+ A AV D ++++LGP+GM++
Sbjct: 22 RLSSFVGAIAVGDLVKSTLGPKGMDK 47
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 74.9 bits (176), Expect = 9e-15
Identities = 33/82 (40%), Positives = 51/82 (62%)
Frame = +3
Query: 255 KMIQAANGEVTITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGAFLD 434
KM+ G + +T DG +L +M + +P A + + + AQD GDGTTSV ++ G L
Sbjct: 43 KMLVDGAGAIKLTKDGKVLLTEMQIQNPTASCIAKAATAQDDATGDGTTSVCLLVGELLK 102
Query: 435 SAEKLLQKGIHPTVISDGFQKA 500
AE +++G+HP++ISDGF A
Sbjct: 103 QAELYIREGLHPSLISDGFNLA 124
Score = 33.5 bits (73), Expect = 0.028
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +2
Query: 509 ALQVVENMSTPVDLNNEDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAVMEP 670
AL +++ T +++ E LL A TSL++K+ S+ LAP V AI + P
Sbjct: 128 ALTFLDSFKTDFEVDRE-VLLNVAKTSLSTKISSKVVESLAPAVVDAILTIRRP 180
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 71.3 bits (167), Expect = 1e-13
Identities = 31/72 (43%), Positives = 49/72 (68%)
Frame = +3
Query: 288 ITNDGATILKQMSVIHPAAKMLVELSRAQDIEAGDGTTSVVVIAGAFLDSAEKLLQKGIH 467
+TND ATI++++ VIHPAAK++V+ ++ Q+ E GD VVV G L AE +++ G+
Sbjct: 64 LTNDAATIIRELEVIHPAAKLVVDATQQQENELGDAANFVVVFTGELLAKAENMIRMGLT 123
Query: 468 PTVISDGFQKAL 503
P I+ G++ AL
Sbjct: 124 PLEIAKGYEMAL 135
Score = 29.9 bits (64), Expect = 0.35
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +1
Query: 100 IMAPKAGGDAIKANSSVYKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMER 258
+ PKA G + Y+ D + N NA + +++ RTSLGP G +
Sbjct: 3 LRVPKASGPQLFREG--YRIMQGVEDAVIRNCNAIRELSEITRTSLGPNGKNK 53
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 36.7 bits (81), Expect = 0.003
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Frame = +3
Query: 258 MIQAANGEVTITNDGATILKQMSVIHP----AAKMLVELSRAQDIEAGDGTTSVVVIAGA 425
+I G IT DG T+ + +S+ A+++ +++ + AGDGTT+ V+ A
Sbjct: 70 LIDQPFGSPKITKDGVTVARSVSLKDKFENLGARLVQDVASKTNEVAGDGTTTATVLTRA 129
Query: 426 FLDSAEKLLQKGIHPTVISDGFQKAL 503
+ + G +P + G Q A+
Sbjct: 130 IFSETVRNVAAGCNPMDLRRGIQLAV 155
Score = 25.8 bits (54), Expect = 5.7
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +1
Query: 85 RLNINIMAPKAGGD-AIKANSSVYKDKSKPTDIRLSNINAAKAVADAIRTSLGPRGMER* 261
RL + I + G A+ + KD D R S + +A A+ +LGP+G
Sbjct: 11 RLPLRIAGRRIPGRFAVPQVRTYAKDLKFGVDARASLLTGVDTLARAVSVTLGPKGRNVL 70
Query: 262 FKQP 273
QP
Sbjct: 71 IDQP 74
>SPBC1773.09c |mug184||meiotically upregulated gene
Mug184|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 29.1 bits (62), Expect = 0.61
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +1
Query: 580 CNITKFQSSFTTLNYFGTHCSASNSS 657
CNI KF SSF T N F T SS
Sbjct: 276 CNIPKFNSSFKTSNDFFTFTKTEESS 301
>SPAC10F6.12c |mam4||protein-S isoprenylcysteine O-methyltransferase
Mam4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 27.1 bits (57), Expect = 2.5
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 323 ECYSSSCKNVGRIISCSRY*SW*WNNISSCYCWCVFGF 436
EC S K+ ++I+C R+ S+ N I S Y GF
Sbjct: 87 ECLLSGGKSFAKVINCLRFPSFLINFIFSVYQTSALGF 124
>SPAC22H10.11c ||||Schizosaccharomyces pombe|chr 1|||Manual
Length = 629
Score = 25.4 bits (53), Expect = 7.5
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +2
Query: 494 KSPSIALQVVENMSTPVDLNNEDALLKAAATSLNSKV-VSQHSTILAPIAVQAIRA 658
+SP+ ++ + TP++L+ E A K TSL S+ +S +ST L P +A A
Sbjct: 333 ESPNSQRTLLSAVPTPLELSAELAY-KEDLTSLASRANISDNSTGLTPTLAKATLA 387
>SPAC31A2.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 542
Score = 25.4 bits (53), Expect = 7.5
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 443 LSRIQKRTSNNNY*CCSITSFNI 375
LS Q TS NN+ C SI +F I
Sbjct: 177 LSNRQLNTSENNWTCLSIENFGI 199
>SPCC1322.05c |||leukotriene A-4 hydrolase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 612
Score = 25.0 bits (52), Expect = 9.9
Identities = 8/35 (22%), Positives = 19/35 (54%)
Frame = +3
Query: 228 HKLRASWNGKMIQAANGEVTITNDGATILKQMSVI 332
H+L SW+G ++ + + N+G T+ + ++
Sbjct: 294 HELAHSWSGNLVTNESWQCFWLNEGMTVFLERKIL 328
>SPAC18G6.05c |||translation elongation regulator Gcn1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2670
Score = 25.0 bits (52), Expect = 9.9
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +2
Query: 533 STPVDLNNEDALLKAAATSLNSKVVSQHSTILAPIAVQAIRAVMEP 670
ST D L+ + N ++ H +ILAP +RA++ P
Sbjct: 2537 STSQDSRRLALLIIRVVSKENYSLIKPHISILAPAIFGCVRAIVIP 2582
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,567,155
Number of Sequences: 5004
Number of extensions: 49221
Number of successful extensions: 160
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 160
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 307866294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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