Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20127
         (531 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022179-1|AAY51573.1|  360|Drosophila melanogaster IP01239p pro...    32   0.56 
AE013599-2438|AAF57887.1|  338|Drosophila melanogaster CG17287-P...    32   0.56 
AY069543-1|AAL39688.1|  602|Drosophila melanogaster LD26991p pro...    28   6.9  
AE013599-3299|AAF46779.3|  637|Drosophila melanogaster CG9304-PA...    28   6.9  

>BT022179-1|AAY51573.1|  360|Drosophila melanogaster IP01239p
           protein.
          Length = 360

 Score = 31.9 bits (69), Expect = 0.56
 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +2

Query: 341 RPCNLCKCKM-YYSNIIILPILFYIEKREIYVYFFAEIIVFF*YFKVSYDLY 493
           R C++C  KM ++   I+  + F+  K  I   F+AE+  F+ +  + YDLY
Sbjct: 164 RTCHMCVLKMDHHCPWIVNCVHFHNFKYFILFLFYAEVYCFYLFCVMVYDLY 215


>AE013599-2438|AAF57887.1|  338|Drosophila melanogaster CG17287-PA
           protein.
          Length = 338

 Score = 31.9 bits (69), Expect = 0.56
 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +2

Query: 341 RPCNLCKCKM-YYSNIIILPILFYIEKREIYVYFFAEIIVFF*YFKVSYDLY 493
           R C++C  KM ++   I+  + F+  K  I   F+AE+  F+ +  + YDLY
Sbjct: 142 RTCHMCVLKMDHHCPWIVNCVHFHNFKYFILFLFYAEVYCFYLFCVMVYDLY 193


>AY069543-1|AAL39688.1|  602|Drosophila melanogaster LD26991p
           protein.
          Length = 602

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
 Frame = -2

Query: 266 LNECYYYIHL----DNNFQAIKIQLRYSIFSKSMFNIFLSFLLITHVLV 132
           LN  +Y IHL     NN  A  +  +YS   +++  ++L FLL+  VL+
Sbjct: 247 LNTLHYDIHLVNLHPNNSAAHPLTYQYSYDQQNLLEMYLVFLLVYIVLL 295


>AE013599-3299|AAF46779.3|  637|Drosophila melanogaster CG9304-PA
           protein.
          Length = 637

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
 Frame = -2

Query: 266 LNECYYYIHL----DNNFQAIKIQLRYSIFSKSMFNIFLSFLLITHVLV 132
           LN  +Y IHL     NN  A  +  +YS   +++  ++L FLL+  VL+
Sbjct: 282 LNTLHYDIHLVNLHPNNSAAHPLTYQYSYDQQNLLEMYLVFLLVYIVLL 330


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,932,198
Number of Sequences: 53049
Number of extensions: 278241
Number of successful extensions: 572
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 572
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1991467008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)