Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20127
         (531 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81530-2|CAB04306.1|  359|Caenorhabditis elegans Hypothetical pr...    30   0.90 
U40941-4|AAA81709.1|  771|Caenorhabditis elegans Hypothetical pr...    30   1.2  
U40941-3|AAM51502.1|  730|Caenorhabditis elegans Hypothetical pr...    30   1.2  
AL023837-3|CAB63348.2|  283|Caenorhabditis elegans Hypothetical ...    29   2.7  
AF024503-16|AAG24086.2|  287|Caenorhabditis elegans Serpentine r...    29   2.7  
Z77657-7|CAH60768.1|  320|Caenorhabditis elegans Hypothetical pr...    28   3.6  
Z68493-8|CAA92795.1|  336|Caenorhabditis elegans Hypothetical pr...    28   3.6  
AF038614-7|AAB92060.2|  664|Caenorhabditis elegans Hypothetical ...    27   6.3  
AF098504-6|ABO52818.1|  300|Caenorhabditis elegans Serpentine re...    27   8.4  

>Z81530-2|CAB04306.1|  359|Caenorhabditis elegans Hypothetical
           protein F36D1.2 protein.
          Length = 359

 Score = 30.3 bits (65), Expect = 0.90
 Identities = 13/35 (37%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
 Frame = -2

Query: 218 IKIQLRYSIFSKSMFNIFLSFLLI-THVLVTKLLV 117
           +KI L+++IF K+  NIF++ LL+   +L+ ++L+
Sbjct: 35  VKIALKFTIFHKNQRNIFIALLLLWFELLICRILL 69


>U40941-4|AAA81709.1|  771|Caenorhabditis elegans Hypothetical
           protein F35C8.7a protein.
          Length = 771

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
 Frame = -2

Query: 290 VYYFLMYYLNECYYYIHLDNNFQAIKIQLRYSIFSKSMFNIFL-SFLLITHVLVTKLLV* 114
           V +FLM  L  C++ + +   F      +  +I+ K+ F+    SFLLIT  +V  ++V 
Sbjct: 601 VKWFLMC-LKCCFWCLEVFFKFLTKNAYIMIAIYGKNFFSSAKDSFLLITRNIVRTVVVH 659

Query: 113 IPNVIQLFEMKYEITMSLG 57
               I LF  K  IT+ +G
Sbjct: 660 KVAGILLFLGKSMITLGMG 678


>U40941-3|AAM51502.1|  730|Caenorhabditis elegans Hypothetical
           protein F35C8.7b protein.
          Length = 730

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
 Frame = -2

Query: 290 VYYFLMYYLNECYYYIHLDNNFQAIKIQLRYSIFSKSMFNIFL-SFLLITHVLVTKLLV* 114
           V +FLM  L  C++ + +   F      +  +I+ K+ F+    SFLLIT  +V  ++V 
Sbjct: 560 VKWFLMC-LKCCFWCLEVFFKFLTKNAYIMIAIYGKNFFSSAKDSFLLITRNIVRTVVVH 618

Query: 113 IPNVIQLFEMKYEITMSLG 57
               I LF  K  IT+ +G
Sbjct: 619 KVAGILLFLGKSMITLGMG 637


>AL023837-3|CAB63348.2|  283|Caenorhabditis elegans Hypothetical
           protein Y37H2C.4 protein.
          Length = 283

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 8/61 (13%)
 Frame = -2

Query: 278 LMYYLNECYYYIH-----LDNNFQAIK---IQLRYSIFSKSMFNIFLSFLLITHVLVTKL 123
           ++Y+   CY YI      L    QA+K   +QL YS+  +S    FL +L  T V +  +
Sbjct: 170 VIYFAIRCYQYISNQLGTLPTQSQALKSLQVQLFYSLILQSAIPSFLMYLPATIVYIVPM 229

Query: 122 L 120
           L
Sbjct: 230 L 230


>AF024503-16|AAG24086.2|  287|Caenorhabditis elegans Serpentine
           receptor, class x protein23 protein.
          Length = 287

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
 Frame = -2

Query: 293 VVYYFLMYYLNECYYYIHLDNNFQAIKIQLRYSI--FSKSMFNIFLSFLLITHVLVT 129
           V+YY L  YL   +YY      F  +   L YS+  +S  +FN  L    +   L+T
Sbjct: 133 VIYYILYDYLGCFFYYEKSSYTFWLVDTPLCYSVSWYSDILFNNSLVVFTLAINLIT 189


>Z77657-7|CAH60768.1|  320|Caenorhabditis elegans Hypothetical
           protein F08H9.12 protein.
          Length = 320

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 11/58 (18%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
 Frame = -2

Query: 290 VYYFLMYYLNECYYYIHL-----DNNFQAIKIQLRYSIFSKSMFNIFLSFLLITHVLV 132
           V++F+   +   Y+Y+H      + +F  ++   +  +FS  +F+ F+ + ++ +++V
Sbjct: 24  VFFFISCLIIPFYFYVHNLNWHKEKDFPIVQFFYKMVLFSYFLFSTFILYFIVLYLIV 81


>Z68493-8|CAA92795.1|  336|Caenorhabditis elegans Hypothetical
           protein C33A12.11 protein.
          Length = 336

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 14/52 (26%), Positives = 26/52 (50%)
 Frame = +2

Query: 317 WFF*LSSIRPCNLCKCKMYYSNIIILPILFYIEKREIYVYFFAEIIVFF*YF 472
           WF+ L S     +CK   +Y N  +  I   I++  ++V   +++I F  +F
Sbjct: 36  WFYMLPSF--VIICKILKFYKNSEVASIAMKIDRNVLFVISLSQLICFCLFF 85


>AF038614-7|AAB92060.2|  664|Caenorhabditis elegans Hypothetical
           protein F15E6.9 protein.
          Length = 664

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = -2

Query: 284 YFLMYYLNECYYYIHLDNNFQAIKIQLRYSIFSKSMFN-IFL 162
           YF +++L EC  YI LD NF       ++SI +   F+ +FL
Sbjct: 101 YFYLHFLGECSGYI-LDPNFTDQSFLRQHSISTGQSFSEVFL 141


>AF098504-6|ABO52818.1|  300|Caenorhabditis elegans Serpentine
           receptor, class t protein61 protein.
          Length = 300

 Score = 27.1 bits (57), Expect = 8.4
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +2

Query: 404 FYIEKREIYVYFFAEIIVFF*YFKVSYDLYRNKRMYL 514
           FY++K E+Y+      +  F Y  + Y L + K+ +L
Sbjct: 198 FYVQKVEMYIEVGGIFVSAFFYLLIIYRLVKTKKRFL 234


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,534,565
Number of Sequences: 27780
Number of extensions: 174928
Number of successful extensions: 389
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 389
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)