Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20126
         (567 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   5.6  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   5.6  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   9.7  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   9.7  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +3

Query: 219 VIKNSGAFFLFYIVSCFN*ILTH 287
           V+  +  F LFY+  C+  I  H
Sbjct: 7   VLTAAAVFLLFYLFYCYKTIKQH 29


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +3

Query: 219 VIKNSGAFFLFYIVSCFN*ILTH 287
           V+  +  F LFY+  C+  I  H
Sbjct: 7   VLTAAAVFLLFYLFYCYKTIKQH 29


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 418 RTYLXSRNKKQFFDFLLSEKKNILVISCMS 507
           +T+L S     +++FLL    NIL+ S  S
Sbjct: 169 KTFLNSCLMDVYYEFLLISLINILIRSFKS 198


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -2

Query: 227 FNYRIIVITRYF 192
           FNY +IV+T ++
Sbjct: 78  FNYYVIVVTTFY 89


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,185
Number of Sequences: 336
Number of extensions: 2589
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)