Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20126
         (567 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X13916-1|CAA32112.1| 4544|Homo sapiens LDL-receptor related prec...    30   6.5  
DQ314873-1|ABC40732.1| 4544|Homo sapiens low density lipoprotein...    30   6.5  
AF283342-1|AAL38107.1|  881|Homo sapiens candidate tumor suppres...    30   6.5  
AF176832-1|AAF70379.1| 4599|Homo sapiens low density lipoprotein...    30   6.5  
AF058427-1|AAC64265.1| 4544|Homo sapiens lipoprotein receptor-re...    30   6.5  
AC073319-1|AAX93075.1|  585|Homo sapiens unknown protein.              30   6.5  

>X13916-1|CAA32112.1| 4544|Homo sapiens LDL-receptor related
           precursor (AA -19 to 4525) protein.
          Length = 4544

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -1

Query: 264 KILYKTKRMHHYF*LPHNSNYALFWT 187
           KI+Y+   ++H F L H+ NY LFWT
Sbjct: 734 KIVYEGPELNHAFGLCHHGNY-LFWT 758


>DQ314873-1|ABC40732.1| 4544|Homo sapiens low density
           lipoprotein-related protein 1 (alpha-2-macroglobulin
           receptor) protein.
          Length = 4544

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -1

Query: 264 KILYKTKRMHHYF*LPHNSNYALFWT 187
           KI+Y+   ++H F L H+ NY LFWT
Sbjct: 734 KIVYEGPELNHAFGLCHHGNY-LFWT 758


>AF283342-1|AAL38107.1|  881|Homo sapiens candidate tumor suppressor
           protein protein.
          Length = 881

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -1

Query: 264 KILYKTKRMHHYF*LPHNSNYALFWT 187
           KI+Y  + ++H F L H+ NY +FWT
Sbjct: 730 KIVYSGRELNHPFGLSHHGNY-VFWT 754


>AF176832-1|AAF70379.1| 4599|Homo sapiens low density lipoprotein
           receptor related protein-deleted in tumor protein.
          Length = 4599

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -1

Query: 264 KILYKTKRMHHYF*LPHNSNYALFWT 187
           KI+Y  + ++H F L H+ NY +FWT
Sbjct: 730 KIVYSGRELNHPFGLSHHGNY-VFWT 754


>AF058427-1|AAC64265.1| 4544|Homo sapiens lipoprotein
           receptor-related protein protein.
          Length = 4544

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -1

Query: 264 KILYKTKRMHHYF*LPHNSNYALFWT 187
           KI+Y+   ++H F L H+ NY LFWT
Sbjct: 734 KIVYEGPELNHAFGLCHHGNY-LFWT 758


>AC073319-1|AAX93075.1|  585|Homo sapiens unknown protein.
          Length = 585

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -1

Query: 264 KILYKTKRMHHYF*LPHNSNYALFWT 187
           KI+Y  + ++H F L H+ NY +FWT
Sbjct: 392 KIVYSGRELNHPFGLSHHGNY-VFWT 416


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,923,311
Number of Sequences: 237096
Number of extensions: 1065563
Number of successful extensions: 1107
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1107
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5759818212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)