Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20125
         (641 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0277 + 7056341-7056391,7056681-7056764,7057107-7057223,705...    30   1.8  
11_06_0130 - 20408835-20411771                                         29   3.1  
06_03_1104 + 27623632-27623795,27624052-27624175,27624316-276248...    28   7.2  
07_01_1023 + 8840754-8842988,8843189-8843362                           27   9.6  
01_01_1018 - 8046819-8046876,8046995-8047212,8048099-8048177,804...    27   9.6  

>03_02_0277 +
           7056341-7056391,7056681-7056764,7057107-7057223,
           7057335-7057772,7057889-7058295,7058371-7058470,
           7058707-7058793,7059056-7059544
          Length = 590

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +1

Query: 454 YSISGRQERPEDY*YHTNNLQCCGINSPADW 546
           Y ISG++  PE   YH   + CC ++SP  W
Sbjct: 402 YLISGQRVNPELIEYH---ILCCRVHSPTQW 429


>11_06_0130 - 20408835-20411771
          Length = 978

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 13/44 (29%), Positives = 29/44 (65%)
 Frame = -2

Query: 520 SIASCLYDINSLLDVLVYRILSNGSVQVAHNRIFQVRMLHVTSD 389
           +I SCL ++NSLL++ +     +G++  +  R+ ++  LH++S+
Sbjct: 268 TIPSCLGNLNSLLELALSDNTLSGAIPSSLGRLSRLSSLHLSSN 311


>06_03_1104 +
           27623632-27623795,27624052-27624175,27624316-27624832,
           27624943-27625073,27625161-27625567,27625690-27625963,
           27626195-27626814,27627424-27627859
          Length = 890

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 19/57 (33%), Positives = 27/57 (47%)
 Frame = -2

Query: 499 DINSLLDVLVYRILSNGSVQVAHNRIFQVRMLHVTSDAHSQFSHEYDQEEY*KRYYH 329
           D N L D+ +  +LSNG    AH  I  VR   +   A S  S     +E+ + +YH
Sbjct: 614 DDNELADLEL--LLSNGESLKAHTAIISVRCPKLLPSAKSLGSDGKITDEWGRSFYH 668


>07_01_1023 + 8840754-8842988,8843189-8843362
          Length = 802

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = -1

Query: 179 ANYQDDQSRNGKQKIEAKHEVLYTGHSTFESHCYSIK 69
           A +Q++     ++K+E    ++ TG  T   H YS+K
Sbjct: 755 AKHQEEILNCNQRKLEVMDSIMLTGKFTHLQHIYSVK 791


>01_01_1018 -
           8046819-8046876,8046995-8047212,8048099-8048177,
           8048455-8048540,8048698-8048983,8049063-8049205,
           8049308-8049508,8049626-8049754,8050463-8050738,
           8050823-8051098,8051364-8052364,8052452-8052634,
           8052865-8052937,8053205-8053313,8053622-8053785
          Length = 1093

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +2

Query: 404 KHTDLEDSVMRNLNASITQYPVDKNVQKTIDIIQTTCNAAV*TVRPTGP 550
           K ++L +  M +    +T Y     V KT+D  + T N+ V   +PT P
Sbjct: 312 KSSNLSNHFMHHQQGFMTNYGACSPVSKTVDRAEQTSNSTV--SKPTSP 358


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,781,648
Number of Sequences: 37544
Number of extensions: 340233
Number of successful extensions: 833
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 833
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)