Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20124
         (631 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    26   0.23 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    26   0.30 
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   2.8  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   8.5  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   8.5  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 26.2 bits (55), Expect = 0.23
 Identities = 28/94 (29%), Positives = 36/94 (38%), Gaps = 3/94 (3%)
 Frame = +2

Query: 188 NATRRDSFGPPTPL---EPYPCQTRGTSTAIDVEPAFVENFPPAQEFEVTPKALVSATSD 358
           NA  +    PP P+   EP P QT       + EP      P        P+   +  S 
Sbjct: 383 NAALKSDEIPPEPVPTPEPQPTQTT------ESEPTQASEQPTESSTTQKPQTTKTPESG 436

Query: 359 YESDGEEAFPELEVPEPIEVSKNFWTVSDRKKEV 460
            ESDG     E  V +P + S  +  VSD  K V
Sbjct: 437 NESDG-VCTKEGIVRDPSDCSVYYTCVSDGSKLV 469


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = +2

Query: 188  NATRRDSFGPPTPLEPYPCQTRGTSTAIDVEPAFVENFPPAQEFEVTPKALVSATS 355
            N +R D   PP P+ P P Q    +T +D   +  E+  P  ++   P    S+T+
Sbjct: 997  NPSREDCTKPPEPVTPAPPQ---VTTGVDTGASSTEHMHP--DWTTKPSTWWSSTT 1047


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +2

Query: 215 PPTPLEPYPCQTRGTSTAIDVEPAFVEN 298
           P + L PYP +T+ T      EP+  ++
Sbjct: 481 PMSSLPPYPNRTQITEVTQQTEPSIYQH 508


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 51  FTYSVILLYCRFVEST 98
           FTY  ++LYC +  +T
Sbjct: 327 FTYVPMILYCVYTTAT 342


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory
          receptor candidate 24 protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 51 FTYSVILLYCRFVEST 98
          FTY  ++LYC +  +T
Sbjct: 52 FTYVPMILYCVYTTAT 67


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,808
Number of Sequences: 336
Number of extensions: 3523
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)