Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20124
         (631 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    27   0.37 
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    25   2.0  
AY748834-1|AAV28182.1|  171|Anopheles gambiae cytochrome P450 pr...    23   6.1  
AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine...    23   8.0  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 27.5 bits (58), Expect = 0.37
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +3

Query: 267 PSMWNQRSLKTFLQHRNSKLLLKRLCQQRVTMKA 368
           PS W Q+ L T  QH+  +  L +L Q  + + A
Sbjct: 397 PSYWKQKKLPTKKQHKQLQAQLDKLTQINIHLHA 430


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
 Frame = +3

Query: 213  ALQRLWNLTRARLA-------GHPL-PSMWNQRSLKTFLQHRNSKLLLKRLCQQRVTMKA 368
            ALQR WN  RARLA        HP+ PS  NQ  +    + RN++   +R  ++    +A
Sbjct: 1030 ALQRDWNEERARLAVSSTLSPSHPVGPSDRNQ-VIAARRERRNARRRERRARER----EA 1084

Query: 369  TEKRPSLNWRSLSQ 410
             ++ PSL + + S+
Sbjct: 1085 QQQNPSLVFSASSE 1098


>AY748834-1|AAV28182.1|  171|Anopheles gambiae cytochrome P450
           protein.
          Length = 171

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
 Frame = +2

Query: 248 TRGTSTAIDVEPAFVEN--FPPAQEFE 322
           TRGTS AID+      +  FP A+ F+
Sbjct: 74  TRGTSVAIDIYTMHHSDDYFPDAERFD 100


>AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine
           protease protein.
          Length = 405

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3

Query: 3   SSCAAVRFTSLATCDEFTYSVILLYCR 83
           S  A +R   LA  DEF +  +LLY R
Sbjct: 132 SYVAKIRGGQLAEIDEFPWMAMLLYER 158


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 701,567
Number of Sequences: 2352
Number of extensions: 15505
Number of successful extensions: 28
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61468785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)