Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20124
(631 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL033514-10|CAE47472.1| 436|Caenorhabditis elegans Hypothetical... 30 1.2
AL033514-9|CAA22098.1| 605|Caenorhabditis elegans Hypothetical ... 30 1.2
Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z73969-4|CAA98235.2| 428|Caenorhabditis elegans Hypothetical pr... 30 1.6
M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger pro... 30 1.6
Z81138-6|CAB03476.2| 515|Caenorhabditis elegans Hypothetical pr... 29 2.1
AL023844-14|CAO82065.1| 515|Caenorhabditis elegans Hypothetical... 29 2.1
Z49072-4|CAA88882.4| 414|Caenorhabditis elegans Hypothetical pr... 28 6.3
AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical ... 28 6.3
AY079165-1|AAL86012.1| 585|Caenorhabditis elegans NADPH-depende... 27 8.4
AL132858-12|CAB60480.1| 585|Caenorhabditis elegans Hypothetical... 27 8.4
>AL033514-10|CAE47472.1| 436|Caenorhabditis elegans Hypothetical
protein Y75B8A.9b protein.
Length = 436
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 362 ESDGEEAFPELEVPEPIEVSKNFWTVSDRKKEVLLDAGALGDV 490
E D E+A + + P + K+F T DR KE+ +D LG +
Sbjct: 68 EKDEEDAVEKQNIAAP-PLPKSFTTFPDRSKEIEIDTDLLGKI 109
>AL033514-9|CAA22098.1| 605|Caenorhabditis elegans Hypothetical
protein Y75B8A.9a protein.
Length = 605
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 362 ESDGEEAFPELEVPEPIEVSKNFWTVSDRKKEVLLDAGALGDV 490
E D E+A + + P + K+F T DR KE+ +D LG +
Sbjct: 68 EKDEEDAVEKQNIAAP-PLPKSFTTFPDRSKEIEIDTDLLGKI 109
>Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical
protein C25D7.3 protein.
Length = 2150
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 294 KTFLQHRNSKLLLKRLCQQRVTMKATEKR 380
K FLQ ++ KL+LKRLC++ +KR
Sbjct: 738 KGFLQLQDEKLILKRLCEKEDEWSGKQKR 766
>Z73969-4|CAA98235.2| 428|Caenorhabditis elegans Hypothetical
protein C12D8.5 protein.
Length = 428
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 359 YESDGEEAFPELEVPEPIEVSKNFWTVSDRKKEVLL 466
Y DG E PE E+PE E++ FW + R + ++
Sbjct: 189 YHCDGAE--PEWEIPEITEITDGFWHLGGRTEHEVM 222
>M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger
protein protein.
Length = 2150
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +3
Query: 294 KTFLQHRNSKLLLKRLCQQRVTMKATEKR 380
K FLQ ++ KL+LKRLC++ +KR
Sbjct: 738 KGFLQLQDEKLILKRLCEKEDEWSGKQKR 766
>Z81138-6|CAB03476.2| 515|Caenorhabditis elegans Hypothetical
protein W05B2.7 protein.
Length = 515
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 284 LVPHRWQWMSRESGTGKVPKALEGQRSLFALH 189
L PHR +W S+ K K L G LFA+H
Sbjct: 269 LEPHRKRWKSQLKQNEKKQKELVGNTLLFAIH 300
>AL023844-14|CAO82065.1| 515|Caenorhabditis elegans Hypothetical
protein W05B2.7 protein.
Length = 515
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 284 LVPHRWQWMSRESGTGKVPKALEGQRSLFALH 189
L PHR +W S+ K K L G LFA+H
Sbjct: 269 LEPHRKRWKSQLKQNEKKQKELVGNTLLFAIH 300
>Z49072-4|CAA88882.4| 414|Caenorhabditis elegans Hypothetical
protein T24A11.3 protein.
Length = 414
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 166 CSLTQPWKCNAKRLLWPSNAFGTLPVPDSRDIHCH 270
C QP C + + S+ + TL P RD+HC+
Sbjct: 300 CGRLQPSPCGGE--IHASDQWQTLSSPSGRDVHCY 332
>AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical
protein F52C12.4 protein.
Length = 1635
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/55 (32%), Positives = 24/55 (43%)
Frame = +3
Query: 276 WNQRSLKTFLQHRNSKLLLKRLCQQRVTMKATEKRPSLNWRSLSQLRLAKTSGPL 440
W + K N +L K L Q T K+P+L+W S Q +L T PL
Sbjct: 771 WLKNRRKHVFCDENLNILPKPLWQSFKKKTKTTKQPTLHWSSPIQKKLKFTVIPL 825
>AY079165-1|AAL86012.1| 585|Caenorhabditis elegans NADPH-dependent
flavin reductase protein.
Length = 585
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = -3
Query: 245 GTGKVP-KALEGQRSLFALHFHG 180
GTG P ++L G RSLF+ HF G
Sbjct: 459 GTGVAPFRSLFGHRSLFSAHFPG 481
>AL132858-12|CAB60480.1| 585|Caenorhabditis elegans Hypothetical
protein Y113G7A.8 protein.
Length = 585
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = -3
Query: 245 GTGKVP-KALEGQRSLFALHFHG 180
GTG P ++L G RSLF+ HF G
Sbjct: 459 GTGVAPFRSLFGHRSLFSAHFPG 481
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,400,517
Number of Sequences: 27780
Number of extensions: 353679
Number of successful extensions: 1067
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1067
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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