Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20123
         (745 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0619 - 4961588-4962409                                           38   0.006
11_02_0147 - 8791117-8792502                                           30   1.7  
09_01_0032 - 541411-541737,542751-543752                               29   3.9  
05_07_0219 - 28474661-28475146,28475979-28476644                       29   3.9  
01_01_0419 - 3146851-3147339,3148428-3148663,3148847-3149793,315...    29   5.2  
07_03_1266 - 25310196-25310400,25310558-25310784                       28   6.8  

>11_01_0619 - 4961588-4962409
          Length = 273

 Score = 38.3 bits (85), Expect = 0.006
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = +3

Query: 189 RCQKCLEFGHWSYECKGKR 245
           +CQKC + GHW+YECK +R
Sbjct: 95  QCQKCFQPGHWTYECKNER 113


>11_02_0147 - 8791117-8792502
          Length = 461

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
 Frame = +3

Query: 180 QGIRCQKCLEFGHWSYECK-GKRKILFVLHVH--ESCIRI*KPKKKVNAAMAAARYP 341
           Q I C KC  + H S +CK     I+F    H  E CIR  K +KK  A +     P
Sbjct: 115 QRIFCSKCRSYSHLSRDCKLSVFCIIFAKETHRTEDCIR--KNQKKPVAKVVGCAAP 169


>09_01_0032 - 541411-541737,542751-543752
          Length = 442

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = +3

Query: 189 RCQKCLEFGHWSYECKGKRK 248
           RC+ CL++GH + +CK  ++
Sbjct: 403 RCEDCLQYGHRTRDCKNNKE 422


>05_07_0219 - 28474661-28475146,28475979-28476644
          Length = 383

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +3

Query: 186 IRCQKCLEFGHWSYECKGKRKI 251
           I C++C +FGH++ EC   RK+
Sbjct: 343 IECRRCGKFGHFADECDEPRKM 364


>01_01_0419 -
           3146851-3147339,3148428-3148663,3148847-3149793,
           3150258-3150356,3151128-3151501
          Length = 714

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 186 IRCQKCLEFGHWSYECKGKRKI 251
           I C +C +FGH++ EC   RK+
Sbjct: 674 IECHRCGKFGHFADECDEPRKM 695


>07_03_1266 - 25310196-25310400,25310558-25310784
          Length = 143

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 14/37 (37%), Positives = 16/37 (43%)
 Frame = +2

Query: 230 VQGQTQDPIRPSRTRIMHKNLKAKEEGQCSNGSCKIP 340
           V G+   P RPS   IM    K    G  S G C +P
Sbjct: 4   VVGRVARPARPSARAIMEGTHKQISSGGASGGYCTVP 40


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,689,991
Number of Sequences: 37544
Number of extensions: 232670
Number of successful extensions: 740
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 740
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)