Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20122
(584 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13D6.02c |byr3||zinc finger protein Byr3|Schizosaccharomyces... 76 4e-15
SPAC683.02c ||SPAC694.01c|zf-CCHC type zinc finger protein|Schiz... 52 8e-08
SPBP35G2.08c |air1||zinc knuckle TRAMP complex subunit Air1|Schi... 46 4e-06
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 44 2e-05
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 31 0.16
SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr... 30 0.22
SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1 |Schizos... 30 0.29
SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated memb... 29 0.50
SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFII... 29 0.50
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc... 29 0.50
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 27 1.5
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 27 1.5
SPBP8B7.15c |||ubiquitin-protein ligase E3 RBBP6 family |Schizos... 26 3.5
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 25 6.2
SPBC15D4.02 |||transcription factor, zf-fungal binuclear cluster... 25 6.2
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom... 25 6.2
SPBC1D7.03 |mug80||cyclin Clg1 |Schizosaccharomyces pombe|chr 2|... 25 6.2
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 25 8.1
>SPAC13D6.02c |byr3||zinc finger protein Byr3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 179
Score = 75.8 bits (178), Expect = 4e-15
Identities = 36/94 (38%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Frame = +1
Query: 250 CEDCKEEADRCYRCNGTGHIARECAQSPDE---PSCYNCNKTGHIARNCPEGGRES---- 408
C + ++E CY C GH+ R+C SP+ CY C + GHIAR+C G++S
Sbjct: 51 CTEPQQEKT-CYACGTAGHLVRDCPSSPNPRQGAECYKCGRVGHIARDCRTNGQQSGGRF 109
Query: 409 ----ATQTCYNCNKSGHISRNCPDGTKTCYVCGK 498
+ CY C GH +R+C G K CY CGK
Sbjct: 110 GGHRSNMNCYACGSYGHQARDCTMGVK-CYSCGK 142
Score = 75.4 bits (177), Expect = 6e-15
Identities = 35/79 (44%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Frame = +1
Query: 277 RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISR 456
RCY C GH AREC + CYNCN+TGH A C E +E +TCY C +GH+ R
Sbjct: 18 RCYNCGENGHQARECTKGS---ICYNCNQTGHKASECTEPQQE---KTCYACGTAGHLVR 71
Query: 457 NCPDGTK-----TCYVCGK 498
+CP CY CG+
Sbjct: 72 DCPSSPNPRQGAECYKCGR 90
Score = 75.4 bits (177), Expect = 6e-15
Identities = 27/61 (44%), Positives = 34/61 (55%)
Frame = +1
Query: 280 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRN 459
CY CN TGH A EC + E +CY C GH+ R+CP CY C + GHI+R+
Sbjct: 38 CYNCNQTGHKASECTEPQQEKTCYACGTAGHLVRDCPSSPNPRQGAECYKCGRVGHIARD 97
Query: 460 C 462
C
Sbjct: 98 C 98
Score = 61.3 bits (142), Expect = 1e-10
Identities = 26/54 (48%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +1
Query: 340 PSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC--PDGTKTCYVCG 495
P CYNC + GH AR C +G CYNCN++GH + C P KTCY CG
Sbjct: 17 PRCYNCGENGHQARECTKG------SICYNCNQTGHKASECTEPQQEKTCYACG 64
Score = 58.8 bits (136), Expect = 5e-10
Identities = 26/61 (42%), Positives = 32/61 (52%)
Frame = +1
Query: 280 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRN 459
CY C GH AR+C CY+C K GH + C + S Q CY CN+ GHI+ N
Sbjct: 118 CYACGSYGHQARDCTMGV---KCYSCGKIGHRSFECQQA---SDGQLCYKCNQPGHIAVN 171
Query: 460 C 462
C
Sbjct: 172 C 172
Score = 50.8 bits (116), Expect = 1e-07
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +1
Query: 277 RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 387
+CY C GH + EC Q+ D CY CN+ GHIA NC
Sbjct: 136 KCYSCGKIGHRSFECQQASDGQLCYKCNQPGHIAVNC 172
Score = 47.2 bits (107), Expect = 2e-06
Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 95 SKPIAMSSSVCYKCNRTGHFARECTQGGVVSRDS-GFNRQREKCFKCNRTGHFAR 256
S P + CYKC R GH AR+C G S G +R C+ C GH AR
Sbjct: 75 SSPNPRQGAECYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYGHQAR 129
Score = 46.4 bits (105), Expect = 3e-06
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 15/64 (23%)
Frame = +2
Query: 119 SVCYKCNRTGHFARECTQ------------GGVVSRD---SGFNRQREKCFKCNRTGHFA 253
S+CY CN+TGH A ECT+ G + RD S RQ +C+KC R GH A
Sbjct: 36 SICYNCNQTGHKASECTEPQQEKTCYACGTAGHLVRDCPSSPNPRQGAECYKCGRVGHIA 95
Query: 254 RIAR 265
R R
Sbjct: 96 RDCR 99
Score = 39.1 bits (87), Expect = 5e-04
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +2
Query: 125 CYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFA 253
CY C GH ARECT+G + C+ CN+TGH A
Sbjct: 19 CYNCGENGHQARECTKGSI-------------CYNCNQTGHKA 48
Score = 37.5 bits (83), Expect = 0.001
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 10/57 (17%)
Frame = +2
Query: 113 SSSVCYKCNRTGHFARECTQG------GVVSRDSGFNRQR----EKCFKCNRTGHFA 253
S+ CY C GH AR+CT G G + S F Q+ + C+KCN+ GH A
Sbjct: 114 SNMNCYACGSYGHQARDCTMGVKCYSCGKIGHRS-FECQQASDGQLCYKCNQPGHIA 169
Score = 31.9 bits (69), Expect = 0.071
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 107 AMSSSVCYKCNRTGHFARECT 169
A +CYKCN+ GH A CT
Sbjct: 153 ASDGQLCYKCNQPGHIAVNCT 173
Score = 29.9 bits (64), Expect = 0.29
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Frame = +1
Query: 238 HRTLCEDCKEEADR--CYRCNGTGHIAREC 321
HR+ +C++ +D CY+CN GHIA C
Sbjct: 145 HRSF--ECQQASDGQLCYKCNQPGHIAVNC 172
>SPAC683.02c ||SPAC694.01c|zf-CCHC type zinc finger
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 218
Score = 51.6 bits (118), Expect = 8e-08
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 280 CYRCNGTGHIARECAQSPDEPS-CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISR 456
C+ C GHI ++C ++ D S C+ C H C + G + C+ C+++GH+S
Sbjct: 79 CFACRQQGHIVQDCPEAKDNVSICFRCGSKEHSLNACSKKGPLKFAK-CFICHENGHLSG 137
Query: 457 NCPDGTKTCYVCG 495
C K Y G
Sbjct: 138 QCEQNPKGLYPKG 150
Score = 36.3 bits (80), Expect = 0.003
Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 4/64 (6%)
Frame = +1
Query: 313 RECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC----PDGTKT 480
R Q + C+ C + GHI ++CPE + C+ C H C P
Sbjct: 68 RRINQRNRDKFCFACRQQGHIVQDCPEA--KDNVSICFRCGSKEHSLNACSKKGPLKFAK 125
Query: 481 CYVC 492
C++C
Sbjct: 126 CFIC 129
Score = 33.9 bits (74), Expect = 0.018
Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Frame = +1
Query: 277 RCYRCNGTGHIARECAQSPD--EPS---CYNCNKTGHIARNCPEGGRESAT 414
+C+ C+ GH++ +C Q+P P C C+ H+A++C + ++ +
Sbjct: 125 KCFICHENGHLSGQCEQNPKGLYPKGGCCKFCSSVHHLAKDCDQVNKDDVS 175
Score = 27.5 bits (58), Expect = 1.5
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +2
Query: 119 SVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFA 253
S+C++C H C++ G + + KCF C+ GH +
Sbjct: 100 SICFRCGSKEHSLNACSKKGPL--------KFAKCFICHENGHLS 136
>SPBP35G2.08c |air1||zinc knuckle TRAMP complex subunit
Air1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 313
Score = 46.0 bits (104), Expect = 4e-06
Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 16/78 (20%)
Frame = +1
Query: 280 CYRCNGTGHIAREC----------------AQSPDEPSCYNCNKTGHIARNCPEGGRESA 411
C+ C G GHI+++C + P C NC GHIA C E R+
Sbjct: 89 CHNCKGNGHISKDCPHVLCTTCGAIDDHISVRCPWTKKCMNCGLLGHIAARCSE-PRKRG 147
Query: 412 TQTCYNCNKSGHISRNCP 465
+ C C+ H S CP
Sbjct: 148 PRVCRTCHTDTHTSSTCP 165
Score = 37.9 bits (84), Expect = 0.001
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 346 CYNCNKTGHIARNCPEGGRESATQTCYNCNK-SGHISRNCPDGTKTCYVCG 495
C+NC GHI+++CP C C HIS CP TK C CG
Sbjct: 89 CHNCKGNGHISKDCPH-------VLCTTCGAIDDHISVRCP-WTKKCMNCG 131
Score = 34.3 bits (75), Expect = 0.013
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 394 GGRESATQTCYNCNKSGHISRNCPDGTKTCYVCG 495
G S + C+NC +GHIS++CP C CG
Sbjct: 80 GSDPSESIVCHNCKGNGHISKDCPH--VLCTTCG 111
Score = 30.7 bits (66), Expect = 0.16
Identities = 20/85 (23%), Positives = 30/85 (35%), Gaps = 15/85 (17%)
Frame = +1
Query: 277 RCYRCNGTGHIARECAQSPDEPS--CYNCNKTGHIARNCPEGGR-------------ESA 411
+C C GHIA C++ C C+ H + CP R
Sbjct: 126 KCMNCGLLGHIAARCSEPRKRGPRVCRTCHTDTHTSSTCPLIWRYYVEKEHPVRIDVSEV 185
Query: 412 TQTCYNCNKSGHISRNCPDGTKTCY 486
+ CYNC H +C +++ Y
Sbjct: 186 RKFCYNCASDEHFGDDCTLPSRSNY 210
Score = 30.3 bits (65), Expect = 0.22
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 6/52 (11%)
Frame = +2
Query: 116 SSVCYKCNRTGHFAREC------TQGGVVSRDSGFNRQREKCFKCNRTGHFA 253
S VC+ C GH +++C T G + S +KC C GH A
Sbjct: 86 SIVCHNCKGNGHISKDCPHVLCTTCGAIDDHISVRCPWTKKCMNCGLLGHIA 137
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 44.0 bits (99), Expect = 2e-05
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1
Query: 346 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCP 465
C NC GH +CPE + C +C GHI+R+CP
Sbjct: 311 CQNCGNVGHRRFDCPERINHTMNIVCRHCGSIGHIARDCP 350
Score = 27.5 bits (58), Expect = 1.5
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +1
Query: 400 RESATQTCYNCNKSGHISRNCPD 468
R+ Q C NC GH +CP+
Sbjct: 304 RDDENQVCQNCGNVGHRRFDCPE 326
Score = 27.1 bits (57), Expect = 2.0
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +1
Query: 280 CYRCNGTGHIARECAQSPDEP 342
C C GHIAR+C +P
Sbjct: 336 CRHCGSIGHIARDCPVRDQQP 356
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 30.7 bits (66), Expect = 0.16
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = +2
Query: 101 PIAMSSSVCYKCNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARIARKR 271
P A +V K N GH E G V +S + K + +R G F+R++ R
Sbjct: 384 PKAAPKAVSQKTNVDGHRNHEAKHGNTVQNESKSQKSSNKEGRSSRGGFFSRLSFSR 440
>SPCC825.02 |||glucosidase II Gtb1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 506
Score = 30.3 bits (65), Expect = 0.22
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Frame = +1
Query: 382 NCPEGGRESATQTCYN----CNKSGHISRNCPDGTKTCYVC 492
+CP+G E T C+N C +G+IS P VC
Sbjct: 66 DCPDGSDEPGTSACHNGKFFCKNTGYISSYIPSNRVDDTVC 106
>SPCC1902.01 |gaf1|SPCC417.01c|transcription factor Gaf1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 855
Score = 29.9 bits (64), Expect = 0.29
Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +1
Query: 325 QSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCN-KSGHISRNCPDGTKTCYVCG 495
++ ++P+ N + N + T TC NC ++ + R PDG C CG
Sbjct: 603 KNAEKPTVSNAAEDKKGDANTRRANATNPTPTCTNCQTRTTPLWRRSPDGQPLCNACG 660
>SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated
membrane proteins, ESCRT 0 complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 610
Score = 29.1 bits (62), Expect = 0.50
Identities = 22/69 (31%), Positives = 27/69 (39%), Gaps = 1/69 (1%)
Frame = -2
Query: 517 SRECGRACRTRSTSWCRRDSCGRCGRTCCSYSRSAS-QTPAPPRDSSVRCGPSCCSCNTT 341
S C R CRT T R+ C CG C+ S + P + VR SC S T
Sbjct: 173 SEVCLR-CRTPFTFTNRKHHCRNCGGVFCNQCSSKTLSLPHLGINQPVRVCDSCYSLRTK 231
Query: 340 ARPGSVRTR 314
+ R R
Sbjct: 232 PKGSKSRAR 240
>SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFIID
complex subunit Taf111|Schizosaccharomyces pombe|chr
1|||Manual
Length = 979
Score = 29.1 bits (62), Expect = 0.50
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 397 GRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKP 501
GR+ T+ C NC + GH+ N K C + G+P
Sbjct: 939 GRKPTTRKCSNCGQVGHMKTN-----KICPLFGRP 968
Score = 25.8 bits (54), Expect = 4.7
Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = +1
Query: 325 QSPDEPSCYNCNKTGHIARN--CPEGGR 402
+ P C NC + GH+ N CP GR
Sbjct: 940 RKPTTRKCSNCGQVGHMKTNKICPLFGR 967
>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1016
Score = 29.1 bits (62), Expect = 0.50
Identities = 26/89 (29%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Frame = -2
Query: 514 RECGRACRTRSTSWCRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTAR 335
+ C AC S C + G S S ++S TP P SS+ P+ S TTA+
Sbjct: 819 QNCNGACYNPSQYGCDNGALGPVQ----SSSTTSSITPTPTTTSSITPTPTTTSTTTTAQ 874
Query: 334 PGSVRTRALCA-----PCRYICSNGQPLP 263
++ LC Y C N Q P
Sbjct: 875 STGMQ---LCGSNYYDASSYYCDNDQLCP 900
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 27.5 bits (58), Expect = 1.5
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 119 SVCYKCNRTGHFAREC 166
S CYKC + H REC
Sbjct: 1804 STCYKCGKADHNLREC 1819
Score = 26.6 bits (56), Expect = 2.7
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +1
Query: 445 HISRNCPDGTKTCYVCGK 498
H + CP TCY CGK
Sbjct: 1794 HTGKACPVRLSTCYKCGK 1811
Score = 25.0 bits (52), Expect = 8.1
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +1
Query: 418 TCYNCNKSGHISRNC 462
TCY C K+ H R C
Sbjct: 1805 TCYKCGKADHNLREC 1819
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 27.5 bits (58), Expect = 1.5
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 119 SVCYKCNRTGHFAREC 166
S CYKC + H REC
Sbjct: 1804 STCYKCGKADHNLREC 1819
Score = 26.6 bits (56), Expect = 2.7
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +1
Query: 445 HISRNCPDGTKTCYVCGK 498
H + CP TCY CGK
Sbjct: 1794 HTGKACPVRLSTCYKCGK 1811
Score = 25.0 bits (52), Expect = 8.1
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +1
Query: 418 TCYNCNKSGHISRNC 462
TCY C K+ H R C
Sbjct: 1805 TCYKCGKADHNLREC 1819
>SPBP8B7.15c |||ubiquitin-protein ligase E3 RBBP6 family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 482
Score = 26.2 bits (55), Expect = 3.5
Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 5/31 (16%)
Frame = +1
Query: 313 RECAQSPDEPS-----CYNCNKTGHIARNCP 390
R A PD+P CY C + GH + CP
Sbjct: 169 RIAASVPDKPPPPGYICYRCGQKGHWIQACP 199
Score = 26.2 bits (55), Expect = 3.5
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +1
Query: 421 CYNCNKSGHISRNCPDGTKTCYVCGKP 501
CY C + GH + CP Y GKP
Sbjct: 185 CYRCGQKGHWIQACPTNADPNY-DGKP 210
Score = 25.4 bits (53), Expect = 6.2
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = +2
Query: 122 VCYKCNRTGHFAREC 166
+CY+C + GH+ + C
Sbjct: 184 ICYRCGQKGHWIQAC 198
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 25.4 bits (53), Expect = 6.2
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -2
Query: 496 CRTRSTSWCRRDSCGRCGRTCCSY 425
C T T + R+ C CG+ C Y
Sbjct: 69 CETEFTLFRRKHHCRICGKIICKY 92
>SPBC15D4.02 |||transcription factor, zf-fungal binuclear cluster
type|Schizosaccharomyces pombe|chr 2|||Manual
Length = 419
Score = 25.4 bits (53), Expect = 6.2
Identities = 21/92 (22%), Positives = 36/92 (39%)
Frame = -2
Query: 421 RSASQTPAPPRDSSVRCGPSCCSCNTTARPGSVRTRALCAPCRYICSNGQPLPCNPRKVS 242
++ S AP +V+ G + + R RT+ C CR + + C+ RK
Sbjct: 8 KTGSNNSAPVTGKTVQSGNALNNSGLVKRQARKRTKTGCLTCR-----KRRIKCDERKPI 62
Query: 241 CAVALEALLTLPIETGIPRHHAPLRAFAREMP 146
C +++ T PR A +R +P
Sbjct: 63 CYNCIKSKRQCEGYTHFPRPSGTFTA-SRRIP 93
>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 25.4 bits (53), Expect = 6.2
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +1
Query: 394 GGRESATQTCYNCNKSG 444
GG+E + ++C +CN SG
Sbjct: 144 GGKEGSVKSCASCNGSG 160
>SPBC1D7.03 |mug80||cyclin Clg1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 461
Score = 25.4 bits (53), Expect = 6.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -2
Query: 430 SYSRSASQTPAPPRDSSVRCGPSCCSCN 347
+YS + T APP SS G SC +CN
Sbjct: 417 TYSPTTLSTNAPPSPSS---GRSCSNCN 441
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 25.0 bits (52), Expect = 8.1
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 419 VCVADSRPPSGQFRAMWP 366
V ++D RPP + RA WP
Sbjct: 302 VSISDYRPPKKRKRAAWP 319
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,022,768
Number of Sequences: 5004
Number of extensions: 37945
Number of successful extensions: 184
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 159
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 252150250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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