Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20121
         (630 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   0.91 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   0.91 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   0.91 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   0.91 
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   3.7  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   3.7  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   8.5  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.91
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +1

Query: 565 KFYIYIF*SIWH*LLNFFSL 624
           +++IY+F S+W  LL F S+
Sbjct: 295 RYFIYMFVSVWKCLLFFVSV 314


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.91
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +1

Query: 565 KFYIYIF*SIWH*LLNFFSL 624
           +++IY+F S+W  LL F S+
Sbjct: 295 RYFIYMFVSVWKCLLFFVSV 314


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.91
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +1

Query: 565 KFYIYIF*SIWH*LLNFFSL 624
           +++IY+F S+W  LL F S+
Sbjct: 295 RYFIYMFVSVWKCLLFFVSV 314


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.91
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +1

Query: 565 KFYIYIF*SIWH*LLNFFSL 624
           +++IY+F S+W  LL F S+
Sbjct: 295 RYFIYMFVSVWKCLLFFVSV 314


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = +1

Query: 70  LINHRYYTFKPRRNTKYTK*NKSHNFTPRVPAKKSSYF 183
           LI+   Y F PR   +     + H FT  V A++   F
Sbjct: 226 LISKCIYVFNPRYYLEKKVTRRLHRFTKSVIAERQENF 263


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = +1

Query: 70  LINHRYYTFKPRRNTKYTK*NKSHNFTPRVPAKKSSYF 183
           LI+   Y F PR   +     + H FT  V A++   F
Sbjct: 226 LISKCIYVFNPRYYLEKKVTRRLHRFTKSVIAERQENF 263


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +1

Query: 106 RNTKYTK*NKSHNFTPRVPAKKSSYFIRQTISSL 207
           R T   + + SHN   ++P    S    QT+S L
Sbjct: 341 RETGLERLDVSHNLLGKLPLTSLSLASAQTLSEL 374


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,453
Number of Sequences: 336
Number of extensions: 2425
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)