Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20121
         (630 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030136-1|ABN49275.1| 1239|Drosophila melanogaster IP16981p pro...    29   3.9  
AE013599-1353|AAF58611.2| 5303|Drosophila melanogaster CG13185-P...    29   3.9  
AE014296-3568|AAS65090.1|  428|Drosophila melanogaster CG33289-P...    29   6.9  
BT004894-1|AAO47872.1|  307|Drosophila melanogaster LD44327p pro...    28   9.1  
AE014298-3086|AAF50852.1|  307|Drosophila melanogaster CG1503-PA...    28   9.1  

>BT030136-1|ABN49275.1| 1239|Drosophila melanogaster IP16981p
           protein.
          Length = 1239

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = +1

Query: 319 GGAERGSPQTFQSFFLKKYIGKLS--NLITQKTDSY 420
           GG  +G PQ+F + F K Y+ KLS  +L+   T+ Y
Sbjct: 325 GGGRKGLPQSFLNRFTKVYLRKLSTEDLLHVVTEKY 360


>AE013599-1353|AAF58611.2| 5303|Drosophila melanogaster CG13185-PA
            protein.
          Length = 5303

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = +1

Query: 319  GGAERGSPQTFQSFFLKKYIGKLS--NLITQKTDSY 420
            GG  +G PQ+F + F K Y+ KLS  +L+   T+ Y
Sbjct: 1896 GGGRKGLPQSFLNRFTKVYLRKLSTEDLLHVVTEKY 1931


>AE014296-3568|AAS65090.1|  428|Drosophila melanogaster CG33289-PA
           protein.
          Length = 428

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +1

Query: 28  HFPTKLCIFTDTKQLINHRYYTFKPRRN 111
           H   + CIF+D ++L+ +RYYT   RRN
Sbjct: 267 HRTKRQCIFSDEQELLFYRYYT---RRN 291


>BT004894-1|AAO47872.1|  307|Drosophila melanogaster LD44327p
           protein.
          Length = 307

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 12/43 (27%), Positives = 24/43 (55%)
 Frame = -3

Query: 391 LIISQCTFSRKNFEKFEDCHVPRPRIVSEHLRLNLDRYEYRFI 263
           L+IS+      +++  ++CH P    VSE LR  L+ +++  +
Sbjct: 186 LVISRPDSKFYHYDSLDNCHSPLAASVSETLRAPLEAWKFALV 228


>AE014298-3086|AAF50852.1|  307|Drosophila melanogaster CG1503-PA
           protein.
          Length = 307

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 12/43 (27%), Positives = 24/43 (55%)
 Frame = -3

Query: 391 LIISQCTFSRKNFEKFEDCHVPRPRIVSEHLRLNLDRYEYRFI 263
           L+IS+      +++  ++CH P    VSE LR  L+ +++  +
Sbjct: 186 LVISRPDSKFYHYDSLDNCHSPLAASVSETLRAPLEAWKFALV 228


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,379,413
Number of Sequences: 53049
Number of extensions: 379202
Number of successful extensions: 721
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)