Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20121
         (630 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g79000.1 68414.m09212 p300/CBP acetyltransferase-related prot...    28   5.9  
At1g52750.1 68414.m05963 hydrolase, alpha/beta fold family prote...    28   5.9  

>At1g79000.1 68414.m09212 p300/CBP acetyltransferase-related protein 2
            (PCAT2) contains Pfam domains PF02135: TAZ zinc finger
            and PF00569: Zinc finger, ZZ type; identical to cDNA
            p300/CBP acetyltransferase-related protein 2  GI:12597460
          Length = 1691

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -3

Query: 349  KFEDCHVPRPRIVSEHLR 296
            K  +CHVPR R + EHLR
Sbjct: 1644 KESECHVPRCRDLKEHLR 1661


>At1g52750.1 68414.m05963 hydrolase, alpha/beta fold family protein
           contains Pfam profile PF00561: hydrolase, alpha/beta
           fold family
          Length = 633

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = +1

Query: 79  HRYYTFKPRRNTKYTK*NKSHNFTP 153
           HR YT +P R++ Y     SHN TP
Sbjct: 303 HRSYTIQPDRSSLYDPLLASHNTTP 327


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,249,564
Number of Sequences: 28952
Number of extensions: 195138
Number of successful extensions: 416
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 416
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1285411824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)