Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20120
         (675 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           22   5.3  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   7.0  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   7.0  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   9.2  

>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
 Frame = -1

Query: 315 RCRHGNESAPQTVAVVHR-I*ERN--SQCENFFKRNTRCH 205
           + + G ++APQ VAV  R   ERN   Q  N F  N R H
Sbjct: 40  KSKPGGKTAPQPVAVARRNARERNRVKQVNNGF-ANLRQH 78


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -3

Query: 304 WQRERSTDCC 275
           WQ ERS  CC
Sbjct: 81  WQMERSCMCC 90


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 12/28 (42%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
 Frame = -2

Query: 665 WKCLISQASRLWLQFGSLL-MRFVIVAS 585
           WK LI Q S L   FG      F+I+ S
Sbjct: 519 WKALIFQISNLQTTFGGTFGDTFIILLS 546


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +1

Query: 232 IFTLGVALLYSVYHCNSLWS 291
           I T  +  +Y +YH   LWS
Sbjct: 240 ILTYLIWTIYEMYHLAILWS 259


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,808
Number of Sequences: 336
Number of extensions: 2646
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)