Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20120
(675 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF037470-1|AAD02099.1| 625|Drosophila melanogaster Rlip protein. 79 7e-15
AE014297-2906|AAF55832.1| 625|Drosophila melanogaster CG11622-P... 79 7e-15
AY113338-1|AAM29343.1| 372|Drosophila melanogaster GH01995p pro... 69 6e-12
AE014135-52|AAF59356.2| 202|Drosophila melanogaster CG1748-PA p... 34 0.20
AY075440-1|AAL68254.1| 1017|Drosophila melanogaster RE02250p pro... 33 0.27
AE014297-1849|AAF55053.2| 1017|Drosophila melanogaster CG31319-P... 33 0.27
AY061555-1|AAL29103.1| 487|Drosophila melanogaster LP09309p pro... 30 3.3
AE014134-412|AAF51252.1| 487|Drosophila melanogaster CG9886-PA ... 30 3.3
X54360-1|CAA38244.1| 1377|Drosophila melanogaster protein ( Dros... 29 5.8
U66884-1|AAC47752.1| 1397|Drosophila melanogaster cubitus interr... 29 5.8
BT024198-1|ABC86260.1| 857|Drosophila melanogaster RE55588p pro... 29 5.8
AE014135-3|AAF59373.2| 1397|Drosophila melanogaster CG2125-PA pr... 29 5.8
AY050239-1|AAK84938.1| 440|Drosophila melanogaster SD02309p pro... 29 7.7
AE014298-757|AAN09145.1| 440|Drosophila melanogaster CG3208-PB,... 29 7.7
AE014298-756|AAF46047.1| 494|Drosophila melanogaster CG3208-PA,... 29 7.7
>AF037470-1|AAD02099.1| 625|Drosophila melanogaster Rlip protein.
Length = 625
Score = 78.6 bits (185), Expect = 7e-15
Identities = 37/85 (43%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = +3
Query: 255 PIFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLF 434
P+FGV + + ERSRCHD +PLVVRD ID+LQ H LK + IY+ EP K + ++L+
Sbjct: 185 PVFGVSVSLATERSRCHDGVDIPLVVRDCIDFLQDH-LKCEQIYKIEPIKTRLMHFKRLY 243
Query: 435 TDR-GPTFPYHWDVPVACAMLKAFI 506
+R + ++P AC++LK F+
Sbjct: 244 NNREHDSAVDELNLPTACSLLKLFL 268
Score = 41.5 bits (93), Expect = 0.001
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +1
Query: 526 LTQELHGQFEQATAIAE-PQREATMTNLINKLPNCNHNLLAWLMRHFQHVV 675
LT +L +FE+ + + ++A + L+ +LP CN LLAW++ HF V+
Sbjct: 276 LTTDLVARFEEVASHPKVTTQQAELQQLLEQLPKCNRTLLAWVLLHFDAVI 326
>AE014297-2906|AAF55832.1| 625|Drosophila melanogaster CG11622-PA
protein.
Length = 625
Score = 78.6 bits (185), Expect = 7e-15
Identities = 37/85 (43%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = +3
Query: 255 PIFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLF 434
P+FGV + + ERSRCHD +PLVVRD ID+LQ H LK + IY+ EP K + ++L+
Sbjct: 185 PVFGVSVSLATERSRCHDGVDIPLVVRDCIDFLQDH-LKCEQIYKIEPIKTRLMHFKRLY 243
Query: 435 TDR-GPTFPYHWDVPVACAMLKAFI 506
+R + ++P AC++LK F+
Sbjct: 244 NNREHDSAVDELNLPTACSLLKLFL 268
Score = 41.5 bits (93), Expect = 0.001
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +1
Query: 526 LTQELHGQFEQATAIAE-PQREATMTNLINKLPNCNHNLLAWLMRHFQHVV 675
LT +L +FE+ + + ++A + L+ +LP CN LLAW++ HF V+
Sbjct: 276 LTTDLVARFEEVASHPKVTTQQAELQQLLEQLPKCNRTLLAWVLLHFDAVI 326
>AY113338-1|AAM29343.1| 372|Drosophila melanogaster GH01995p
protein.
Length = 372
Score = 68.9 bits (161), Expect = 6e-12
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = +3
Query: 255 PIFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLF 434
P+FGV + + ERSRCHD +PLVVRD ID+LQ LK + IY+ P + + ++L+
Sbjct: 185 PVFGVSVSLATERSRCHDGVDIPLVVRDCIDFLQDR-LKCERIYKVGPIETRLMHFKRLY 243
Query: 435 TDRGPTFPYH-WDVPVACAMLKAFI 506
+R ++P AC++L+ F+
Sbjct: 244 NNREHDSAVDGLNLPTACSLLRLFL 268
Score = 42.7 bits (96), Expect = 4e-04
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +1
Query: 412 FNN*GSCSRIEGLHSRITGTFLSLALCSKLLSGTPGIDLTQELHGQFEQATAIAE-PQRE 588
+NN S ++GL+ + L L L P LT +L +FE+ + + ++
Sbjct: 243 YNNREHDSAVDGLNLPTACSLLRL-----FLRELPEPLLTTDLVARFEEVASHPKVTTQQ 297
Query: 589 ATMTNLINKLPNCNHNLLAWLMRHFQHVV 675
A + L+ +LP CN LLAW++ HF V+
Sbjct: 298 AELQQLLEQLPKCNRTLLAWVLLHFDAVI 326
>AE014135-52|AAF59356.2| 202|Drosophila melanogaster CG1748-PA
protein.
Length = 202
Score = 33.9 bits (74), Expect = 0.20
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +3
Query: 318 LPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLF 434
+P+ V + IDYL+ +GL+ ++R K + +QLR+ F
Sbjct: 2 VPIFVNNCIDYLEDNGLQQVGLFRVSTSKKRVKQLREEF 40
>AY075440-1|AAL68254.1| 1017|Drosophila melanogaster RE02250p
protein.
Length = 1017
Score = 33.5 bits (73), Expect = 0.27
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +3
Query: 258 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRK 428
+FGVPL ++RS LPL VR + +LQ + L I+R K + +LR+
Sbjct: 562 VFGVPLLMILQRS----GQTLPLAVRAAFRWLQLNALDQVGIFRKSGGKSRIMKLRE 614
>AE014297-1849|AAF55053.2| 1017|Drosophila melanogaster CG31319-PA
protein.
Length = 1017
Score = 33.5 bits (73), Expect = 0.27
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +3
Query: 258 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRK 428
+FGVPL ++RS LPL VR + +LQ + L I+R K + +LR+
Sbjct: 562 VFGVPLLMILQRS----GQTLPLAVRAAFRWLQLNALDQVGIFRKSGGKSRIMKLRE 614
>AY061555-1|AAL29103.1| 487|Drosophila melanogaster LP09309p
protein.
Length = 487
Score = 29.9 bits (64), Expect = 3.3
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 490 CSKLLSGTPGIDLTQELHGQFEQATAIAEPQREATMTNLINKLPNC-NHNLLAWLMRHFQ 666
C+ L +GT GID + G F ++ + + T+ L L NC ++N L +
Sbjct: 408 CTFLSAGTDGIDGPTDAAGAFGDSSVVESYLGDHTLDELAETLRNCDSYNFYKNLAQGEH 467
Query: 667 HVV 675
HV+
Sbjct: 468 HVL 470
>AE014134-412|AAF51252.1| 487|Drosophila melanogaster CG9886-PA
protein.
Length = 487
Score = 29.9 bits (64), Expect = 3.3
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 490 CSKLLSGTPGIDLTQELHGQFEQATAIAEPQREATMTNLINKLPNC-NHNLLAWLMRHFQ 666
C+ L +GT GID + G F ++ + + T+ L L NC ++N L +
Sbjct: 408 CTFLSAGTDGIDGPTDAAGAFGDSSVVESYLGDHTLDELAETLRNCDSYNFYKNLAQGEH 467
Query: 667 HVV 675
HV+
Sbjct: 468 HVL 470
>X54360-1|CAA38244.1| 1377|Drosophila melanogaster protein (
Drosophila ciD (cubitusinterruptus Dominant) locus mRNA.
).
Length = 1377
Score = 29.1 bits (62), Expect = 5.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 331 TTSGRPVSSWQRERSTDCCSGTPNIGAQ 248
+TSG PV + + +S + C PNIG Q
Sbjct: 905 STSGLPVLNKESNKSLNACINKPNIGVQ 932
>U66884-1|AAC47752.1| 1397|Drosophila melanogaster cubitus
interruptus dominant proteinprotein.
Length = 1397
Score = 29.1 bits (62), Expect = 5.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 331 TTSGRPVSSWQRERSTDCCSGTPNIGAQ 248
+TSG PV + + +S + C PNIG Q
Sbjct: 905 STSGLPVLNKESNKSLNACINKPNIGVQ 932
>BT024198-1|ABC86260.1| 857|Drosophila melanogaster RE55588p
protein.
Length = 857
Score = 29.1 bits (62), Expect = 5.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 331 TTSGRPVSSWQRERSTDCCSGTPNIGAQ 248
+TSG PV + + +S + C PNIG Q
Sbjct: 365 STSGLPVLNKESNKSLNACINKPNIGVQ 392
>AE014135-3|AAF59373.2| 1397|Drosophila melanogaster CG2125-PA
protein.
Length = 1397
Score = 29.1 bits (62), Expect = 5.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 331 TTSGRPVSSWQRERSTDCCSGTPNIGAQ 248
+TSG PV + + +S + C PNIG Q
Sbjct: 905 STSGLPVLNKESNKSLNACINKPNIGVQ 932
>AY050239-1|AAK84938.1| 440|Drosophila melanogaster SD02309p
protein.
Length = 440
Score = 28.7 bits (61), Expect = 7.7
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +3
Query: 258 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFT 437
+FG L V+ H +P VVR ++ ++A G+ + IYR + + L KL
Sbjct: 301 VFGTDLTTMVQLEPHHQ---IPFVVRRCVEEVEARGMLQEGIYRVSGFADEIEAL-KLAL 356
Query: 438 DR 443
DR
Sbjct: 357 DR 358
>AE014298-757|AAN09145.1| 440|Drosophila melanogaster CG3208-PB,
isoform B protein.
Length = 440
Score = 28.7 bits (61), Expect = 7.7
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +3
Query: 258 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFT 437
+FG L V+ H +P VVR ++ ++A G+ + IYR + + L KL
Sbjct: 301 VFGTDLTTMVQLEPHHQ---IPFVVRRCVEEVEARGMLQEGIYRVSGFADEIEAL-KLAL 356
Query: 438 DR 443
DR
Sbjct: 357 DR 358
>AE014298-756|AAF46047.1| 494|Drosophila melanogaster CG3208-PA,
isoform A protein.
Length = 494
Score = 28.7 bits (61), Expect = 7.7
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +3
Query: 258 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFT 437
+FG L V+ H +P VVR ++ ++A G+ + IYR + + L KL
Sbjct: 301 VFGTDLTTMVQLEPHHQ---IPFVVRRCVEEVEARGMLQEGIYRVSGFADEIEAL-KLAL 356
Query: 438 DR 443
DR
Sbjct: 357 DR 358
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,010,015
Number of Sequences: 53049
Number of extensions: 488476
Number of successful extensions: 1408
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1408
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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