Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20120
(675 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46812-6|CAA86848.2| 546|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z46812-5|CAA86847.2| 775|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z37093-8|CAA85469.2| 546|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z81130-4|CAB03414.2| 512|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activati... 30 1.3
L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical pr... 30 1.3
AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical ... 30 1.3
AC024755-8|AAF59636.2| 604|Caenorhabditis elegans Hypothetical ... 30 1.7
Z66521-14|CAI70416.1| 245|Caenorhabditis elegans Hypothetical p... 29 2.3
Z66521-13|CAA91403.1| 444|Caenorhabditis elegans Hypothetical p... 29 2.3
U97002-3|AAB52263.1| 1085|Caenorhabditis elegans Hypothetical pr... 27 9.2
AL033508-4|CAE45091.1| 430|Caenorhabditis elegans Hypothetical ... 27 9.2
AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical ... 27 9.2
AC024869-4|ABB51173.1| 285|Caenorhabditis elegans Hypothetical ... 27 9.2
>Z46812-6|CAA86848.2| 546|Caenorhabditis elegans Hypothetical
protein ZK669.1b protein.
Length = 546
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/59 (42%), Positives = 36/59 (61%)
Frame = +3
Query: 258 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLF 434
IFGVPL+ +E H + +PL++ SID LQ GL++K IYRT K K +++ F
Sbjct: 176 IFGVPLKGLLE----HQNRHIPLIIEKSIDQLQRRGLRAKGIYRTCGVKSKIEEICNAF 230
>Z46812-5|CAA86847.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/59 (42%), Positives = 36/59 (61%)
Frame = +3
Query: 258 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLF 434
IFGVPL+ +E H + +PL++ SID LQ GL++K IYRT K K +++ F
Sbjct: 405 IFGVPLKGLLE----HQNRHIPLIIEKSIDQLQRRGLRAKGIYRTCGVKSKIEEICNAF 459
>Z37093-8|CAA85469.2| 546|Caenorhabditis elegans Hypothetical
protein ZK669.1b protein.
Length = 546
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/59 (42%), Positives = 36/59 (61%)
Frame = +3
Query: 258 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLF 434
IFGVPL+ +E H + +PL++ SID LQ GL++K IYRT K K +++ F
Sbjct: 176 IFGVPLKGLLE----HQNRHIPLIIEKSIDQLQRRGLRAKGIYRTCGVKSKIEEICNAF 230
>Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/59 (42%), Positives = 36/59 (61%)
Frame = +3
Query: 258 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLF 434
IFGVPL+ +E H + +PL++ SID LQ GL++K IYRT K K +++ F
Sbjct: 405 IFGVPLKGLLE----HQNRHIPLIIEKSIDQLQRRGLRAKGIYRTCGVKSKIEEICNAF 459
>Z81130-4|CAB03414.2| 512|Caenorhabditis elegans Hypothetical
protein T23G11.5 protein.
Length = 512
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/57 (33%), Positives = 32/57 (56%)
Frame = +3
Query: 258 IFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRK 428
+ G+PL +SV D LP R +ID+++ +GL ++ IYR P K + +L +
Sbjct: 52 VLGLPLTESVSADPSLDGIPLPSFFRYAIDFVEENGLCTEGIYRLSPPKSRLDELER 108
>U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activating
protein protein.
Length = 1439
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +1
Query: 433 SRIEGLHSRITGTFLSLALCSKLLSGTPGIDLTQELHGQFEQATAIA-EPQREATMTNLI 609
S++E L R + +L L P LT +L+ F A I+ R + NL+
Sbjct: 845 SKVESLDPRWRDVNVVSSLLKMFLRKLPEPLLTDKLYPFFIDANRISTHHNRLHKLRNLL 904
Query: 610 NKLPNCNHNLLAWLMRHFQHV 672
KLP +++ L +L+ H +
Sbjct: 905 RKLPRPHYDTLRFLIVHLSEI 925
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/68 (23%), Positives = 34/68 (50%)
Frame = +3
Query: 243 GSCAPIFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQL 422
G+ P+ GV + S C D +P++V+ + ++ +G+ + IYR + L
Sbjct: 774 GAPQPVLGVRIADCPTGS-CEDH--VPMIVQACVCVIETYGMDTVGIYRIPGNTAAVNAL 830
Query: 423 RKLFTDRG 446
++ ++RG
Sbjct: 831 KESLSNRG 838
>L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical
protein C04D8.1 protein.
Length = 1317
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +1
Query: 433 SRIEGLHSRITGTFLSLALCSKLLSGTPGIDLTQELHGQFEQATAIA-EPQREATMTNLI 609
S++E L R + +L L P LT +L+ F A I+ R + NL+
Sbjct: 723 SKVESLDPRWRDVNVVSSLLKMFLRKLPEPLLTDKLYPFFIDANRISTHHNRLHKLRNLL 782
Query: 610 NKLPNCNHNLLAWLMRHFQHV 672
KLP +++ L +L+ H +
Sbjct: 783 RKLPRPHYDTLRFLIVHLSEI 803
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/68 (23%), Positives = 34/68 (50%)
Frame = +3
Query: 243 GSCAPIFGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQL 422
G+ P+ GV + S C D +P++V+ + ++ +G+ + IYR + L
Sbjct: 652 GAPQPVLGVRIADCPTGS-CEDH--VPMIVQACVCVIETYGMDTVGIYRIPGNTAAVNAL 708
Query: 423 RKLFTDRG 446
++ ++RG
Sbjct: 709 KESLSNRG 716
>AL033536-1|CAA22138.1| 908|Caenorhabditis elegans Hypothetical
protein Y53C10A.4 protein.
Length = 908
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +3
Query: 321 PLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFTDRGPTFPYH-WDVPVACAMLK 497
P + +D+L+ G ++ I+R P + F++L K D+G +H ++ V ++LK
Sbjct: 264 PQPIMTIVDHLRMDGFDAEGIFRKSPKQSTFKEL-KCELDKGVVPDFHKYNTHVLASILK 322
Query: 498 AFI 506
++
Sbjct: 323 EYL 325
>AC024755-8|AAF59636.2| 604|Caenorhabditis elegans Hypothetical
protein Y34B4A.8 protein.
Length = 604
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +3
Query: 255 PIFGVPLQQ--SVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLR 425
P+FGVPL + S+++ R V+ D+L+ +G+ + I+R + K +++R
Sbjct: 237 PVFGVPLDEHLSIQKERISG------VLTKCCDFLRQNGMNERGIFRVSGNASKIKRIR 289
>Z66521-14|CAI70416.1| 245|Caenorhabditis elegans Hypothetical
protein W02B12.8b protein.
Length = 245
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 261 FGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYR 389
FGVPL+ + H +P +V I+YL+AH L + ++R
Sbjct: 48 FGVPLEFILS----HCGGNIPPIVDQLIEYLEAHALTMEGVFR 86
>Z66521-13|CAA91403.1| 444|Caenorhabditis elegans Hypothetical
protein W02B12.8a protein.
Length = 444
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 261 FGVPLQQSVERSRCHDDTGLPLVVRDSIDYLQAHGLKSKDIYR 389
FGVPL+ + H +P +V I+YL+AH L + ++R
Sbjct: 247 FGVPLEFILS----HCGGNIPPIVDQLIEYLEAHALTMEGVFR 285
>U97002-3|AAB52263.1| 1085|Caenorhabditis elegans Hypothetical
protein K09H11.3 protein.
Length = 1085
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/64 (20%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +3
Query: 318 LPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFTDRGP-TFPYHWDVPVACAML 494
+P + ++ + + HG+ + I+R E + ++ + +G P + V C M+
Sbjct: 65 VPKFIVNAFNIISKHGMDTDGIFRKEGNSVRLNRAEVQAIYKGQRDIPNDYSVIDVCTMV 124
Query: 495 KAFI 506
K F+
Sbjct: 125 KRFL 128
>AL033508-4|CAE45091.1| 430|Caenorhabditis elegans Hypothetical
protein Y106G6G.6 protein.
Length = 430
Score = 27.5 bits (58), Expect = 9.2
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +1
Query: 454 SRITGTFLSLALCSKLLSGTPGIDLTQELHGQFEQATAIAEPQREATMTNLINKL 618
SRI + L+ + L+S +PG+ Q L G F+ A+ +E E T ++ L
Sbjct: 130 SRIAASALAEVVTRLLVSESPGMSFNQTLIGPFQTASC-SENCSEETKEQFLSSL 183
>AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical
protein Y75B7AL.4a protein.
Length = 1126
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/64 (20%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +3
Query: 318 LPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFTDRGPT-FPYHWDVPVACAML 494
+P + + + + HG+ + I+R E + ++ + +G + P + V C M+
Sbjct: 65 VPKFIVHAFNIISKHGMDTDGIFRKEGNSVRLNRAEVQAIYKGQSDIPNDYSVIDVCTMV 124
Query: 495 KAFI 506
K F+
Sbjct: 125 KRFL 128
>AC024869-4|ABB51173.1| 285|Caenorhabditis elegans Hypothetical
protein Y75B7AL.4b protein.
Length = 285
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/64 (20%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +3
Query: 318 LPLVVRDSIDYLQAHGLKSKDIYRTEPDKIKFQQLRKLFTDRGPT-FPYHWDVPVACAML 494
+P + + + + HG+ + I+R E + ++ + +G + P + V C M+
Sbjct: 65 VPKFIVHAFNIISKHGMDTDGIFRKEGNSVRLNRAEVQAIYKGQSDIPNDYSVIDVCTMV 124
Query: 495 KAFI 506
K F+
Sbjct: 125 KRFL 128
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,199,992
Number of Sequences: 27780
Number of extensions: 244504
Number of successful extensions: 654
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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