Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20116
         (550 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.            25   1.2  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   2.2  

>U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.
          Length = 280

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +3

Query: 447 CTKNDTGEPCPELKEYIFNTKWCLIGT 527
           C  N     CP+LK  +FN   C  G+
Sbjct: 239 CWCNSNPTQCPDLKPGVFNRSACKYGS 265


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = +3

Query: 411 IYVVVNGRELMDCTKNDTGE 470
           I +++NGR+LM C +  +G+
Sbjct: 205 IPIILNGRDLMACAQTGSGK 224


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 505,175
Number of Sequences: 2352
Number of extensions: 8168
Number of successful extensions: 17
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)