Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20115
(637 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC16C4.08c |skb15||Shk1 kinase binding protein 15|Schizosaccha... 62 9e-11
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 39 7e-04
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 38 0.001
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 37 0.002
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 37 0.002
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 36 0.004
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 36 0.004
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 36 0.005
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 35 0.011
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 35 0.011
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 35 0.011
SPAC890.04c |||ribosome biogenesis protein Ytm1 |Schizosaccharom... 35 0.011
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 34 0.015
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 34 0.015
SPBC609.03 |||WD repeat protein, human IQWD1 family|Schizosaccha... 33 0.026
SPAC23H3.05c |swd1||COMPASS complex subunit Swd1|Schizosaccharom... 33 0.026
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 33 0.035
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 33 0.046
SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces pombe... 33 0.046
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 32 0.060
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 32 0.060
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 32 0.080
SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces p... 31 0.11
SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9 |Schizosacchar... 31 0.11
SPCC1235.09 |||histone deacetylase complex subunit|Schizosacchar... 31 0.14
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 31 0.18
SPCC126.01c ||SPCC576.18c|conserved fungal protein|Schizosacchar... 31 0.18
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 30 0.24
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 30 0.32
SPBC27B12.05 |||WD repeat protein|Schizosaccharomyces pombe|chr ... 29 0.43
SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6 family|Schi... 29 0.43
SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr 2|||M... 29 0.43
SPCC790.02 |pep3|vps18, vps18|ubiquitin-protein ligase E3 |Schiz... 29 0.56
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 29 0.56
SPBC106.09 |cut4|apc1|anaphase-promoting complex subunit Apc1|Sc... 29 0.74
SPAC4D7.05 |sum1|tif34|translation initiation factor eIF3i|Schiz... 29 0.74
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 28 0.98
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 28 1.3
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 28 1.3
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 28 1.3
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 27 1.7
SPAC1006.02 |||WD repeat protein, human GNB1L family|Schizosacch... 27 1.7
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 27 1.7
SPBC18H10.06c |swd2|swd2.1|COMPASS complex subunit Swd2|Schizosa... 27 1.7
SPAC23H3.08c |bub3||mitotic spindle checkpoint protein Bub3|Schi... 27 2.3
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 27 2.3
SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr 2|... 27 2.3
SPAC25H1.06 |||histone acetyltransferase complex subunit |Schizo... 27 2.3
SPAC1B3.13 |||U3 snoRNP-associated protein Nan1|Schizosaccharomy... 27 2.3
SPAC959.03c |||U3 snoRNP-associated protein Utp7|Schizosaccharom... 27 3.0
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb... 27 3.0
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 26 4.0
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 26 4.0
SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyc... 26 4.0
SPAC824.04 |||WD repeat protein|Schizosaccharomyces pombe|chr 1|... 26 4.0
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 26 4.0
SPBC29B5.02c |isp4||OPT oligopeptide transporter family |Schizos... 26 5.2
SPBC27.05 |||dubious|Schizosaccharomyces pombe|chr 2|||Manual 26 5.2
SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit Git... 26 5.2
SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces po... 25 6.9
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 25 6.9
SPBC15D4.04 |gpt2|gpt, alg7|UDP-N-acetylglucosamine--dolichyl-ph... 25 6.9
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 25 6.9
SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor Raf1|S... 25 6.9
SPAC343.17c |||WD repeat protein, human WDR70 family|Schizosacch... 25 9.1
SPCC4G3.09c |gyp3||GTPase activating protein Gyp3|Schizosaccharo... 25 9.1
SPBC1A4.07c |||U3 snoRNP-associated protein Sof1|Schizosaccharom... 25 9.1
>SPCC16C4.08c |skb15||Shk1 kinase binding protein
15|Schizosaccharomyces pombe|chr 3|||Manual
Length = 341
Score = 61.7 bits (143), Expect = 9e-11
Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Frame = +1
Query: 286 VNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKA-HGGQPVVDITIHPSDKLALT 462
+ + FT N HLL+ D+G I + G+W + K + H G + I +HPS+KLALT
Sbjct: 82 IRDMCFTKN--HLLACHDNGQISMWSKGSWLLVHTLKSSSHKG--ITGIAVHPSEKLALT 137
Query: 463 IGGDKTLRTWNLVKG 507
+GGD LR W+LV+G
Sbjct: 138 VGGDGKLRLWDLVRG 152
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 38.7 bits (86), Expect = 7e-04
Identities = 24/94 (25%), Positives = 44/94 (46%)
Frame = +1
Query: 226 SYLRHEDSKRHTVLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAH 405
+YL D K + H ++ A + + TH + S DG+++ G + + ++H
Sbjct: 298 TYLNPSDCKVIDTIYGHQRSITAATLSPDATHFYTASYDGTVLSWDIGKQKAFPLVGESH 357
Query: 406 GGQPVVDITIHPSDKLALTIGGDKTLRTWNLVKG 507
Q + I +D +TIG D TLR ++ +G
Sbjct: 358 TNQVMQMIM---ADDHVITIGMDDTLRVIDIKQG 388
Score = 28.3 bits (60), Expect = 0.98
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +2
Query: 158 TASVRCISIA--GKFLASGGTDDKVVILDMKTRK 253
TA + C++ + GK+LA G KVV+ D +R+
Sbjct: 479 TAPITCLAYSPDGKYLACGDASGKVVLYDANSRE 512
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 37.9 bits (84), Expect = 0.001
Identities = 25/85 (29%), Positives = 39/85 (45%)
Frame = +1
Query: 241 EDSKRHTVLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPV 420
EDS L++H G V F+ + +LLS S+D S + + + + K H G PV
Sbjct: 367 EDSDGSVRLLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSV-DTKTALVAYKGHTG-PV 424
Query: 421 VDITIHPSDKLALTIGGDKTLRTWN 495
D+ P T D+T + W+
Sbjct: 425 WDVAFGPFGHYFATASHDQTAQLWS 449
Score = 32.3 bits (70), Expect = 0.060
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +1
Query: 274 HDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIW--KKAHGGQPVVD-ITIHPS 444
H G V VAF G + + S D + + W + I+ + G VD +T HP+
Sbjct: 420 HTGPVWDVAFGPFGHYFATASHDQTAQL-----WSCDHIYPLRVFAGHLSDVDCVTFHPN 474
Query: 445 DKLALTIGGDKTLRTWNLVKG 507
LT DKT R W++ +G
Sbjct: 475 SAYVLTGSSDKTCRLWDVHRG 495
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 37.1 bits (82), Expect = 0.002
Identities = 20/75 (26%), Positives = 36/75 (48%)
Frame = +1
Query: 274 HDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHPSDKL 453
H V A+AF +G L + S+DG++ + + + + + PV D+ IHP+
Sbjct: 82 HTNNVTAIAFHCDGKWLATSSEDGTV---KVWDMRAPSVQRNYDHKSPVNDLLIHPNQGE 138
Query: 454 ALTIGGDKTLRTWNL 498
L+ +R W+L
Sbjct: 139 LLSCDQSGRVRAWDL 153
Score = 25.0 bits (52), Expect = 9.1
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 137 TFATHSHTASVRCISIAGKFLASGGTDDKVVILDMK 244
TF H++ + GK+LA+ D V + DM+
Sbjct: 78 TFEGHTNNVTAIAFHCDGKWLATSSEDGTVKVWDMR 113
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 37.1 bits (82), Expect = 0.002
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 238 HEDSKRHTVLMN-HDGTVNAVAFTNNGTHLLSGSDDGSIIV 357
+ED + M+ H GTV +V F+ NG +L SGSDD +I+
Sbjct: 60 NEDLPKQLCCMSTHTGTVTSVRFSPNGQYLASGSDDRVVII 100
Score = 32.3 bits (70), Expect = 0.060
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +1
Query: 241 EDSKRHTVLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQ-IEKIWKKAHGGQP 417
E+ + + L+ HD + + ++ + ++S D SIIV ++ +++I +AH
Sbjct: 122 ENWRSYRRLLGHDNDIQDLCWSYDSQLVVSVGLDSSIIVWNGTTFERLKRI--EAHQSH- 178
Query: 418 VVDITIHPSDKLALTIGGDKTLRTWNL 498
V IT P+ K T D+T++ W +
Sbjct: 179 VKGITFDPAGKYFATESDDRTIKVWRV 205
Score = 30.7 bits (66), Expect = 0.18
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +2
Query: 113 ETEKIIKQTFATHSHTASVRCISIA--GKFLASGGTDDKVVIL 235
E E + KQ +HT +V + + G++LAS G+DD+VVI+
Sbjct: 59 ENEDLPKQLCCMSTHTGTVTSVRFSPNGQYLAS-GSDDRVVII 100
Score = 27.9 bits (59), Expect = 1.3
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = +1
Query: 274 HDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHPS 444
H V + F G + + SDD +I V R ++ IEK P+ PS
Sbjct: 175 HQSHVKGITFDPAGKYFATESDDRTIKVWRVSDFSIEKTITGPFNNSPLSTYFRRPS 231
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 36.3 bits (80), Expect = 0.004
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Frame = +1
Query: 262 VLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIV---TRTGNWQIEKIWKKAHGGQPVVDIT 432
VL HD VN AF +LS DD + + T + W+++ + H V
Sbjct: 207 VLEGHDRGVNWCAFHPTLPLILSAGDDRLVKLWRMTASKAWEVDTC--RGHFNN-VSCCL 263
Query: 433 IHPSDKLALTIGGDKTLRTWNL 498
HP +L L+ DKT+R W+L
Sbjct: 264 FHPHQELILSASEDKTIRVWDL 285
Score = 34.7 bits (76), Expect = 0.011
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +1
Query: 274 HDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDI-TIHPSDK 450
HDG V +AF +SG DD + V N++ K+ G V + T H
Sbjct: 52 HDGPVRGIAFHPTQPLFVSGGDDYKVNV---WNYKSRKLLFSLCGHMDYVRVCTFHHEYP 108
Query: 451 LALTIGGDKTLRTWN 495
L+ D+T+R WN
Sbjct: 109 WILSCSDDQTIRIWN 123
Score = 34.3 bits (75), Expect = 0.015
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +1
Query: 265 LMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHG-GQPVVDITIHP 441
L H V F + +LS SDD +I R NWQ G V+ HP
Sbjct: 91 LCGHMDYVRVCTFHHEYPWILSCSDDQTI---RIWNWQSRNCIAILTGHSHYVMCAAFHP 147
Query: 442 SDKLALTIGGDKTLRTWNLVKGLQ 513
S+ L ++ D+T+R W+ + GL+
Sbjct: 148 SEDLIVSASLDQTVRVWD-ISGLR 170
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 36.3 bits (80), Expect = 0.004
Identities = 25/81 (30%), Positives = 40/81 (49%)
Frame = +1
Query: 265 LMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHPS 444
L H +V VA G ++S S DG++ V + + + H G+ V +TI+PS
Sbjct: 573 LRGHTDSVREVACL--GDLIVSASYDGTLRVWKASTGVCLHVLR-GHVGR-VYSVTINPS 628
Query: 445 DKLALTIGGDKTLRTWNLVKG 507
+ ++ G D +R WNL G
Sbjct: 629 RQQCISAGTDAKIRIWNLESG 649
Score = 25.0 bits (52), Expect = 9.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 131 KQTFATHSHTASVRCISIAGKFLASGGTDD 220
KQ F + HT+++RCI I ++ TDD
Sbjct: 479 KQVF--YGHTSTIRCIKIVQGNQSTTDTDD 506
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 35.9 bits (79), Expect = 0.005
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Frame = +1
Query: 271 NHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHPSDK 450
+HD V ++ +G L+SG D G ++ N KI +AH + V D+ P+D
Sbjct: 121 SHDYAVRCAEWSTDGRWLISG-DGGGMVKYFEPNLNNVKI-VQAHEME-VRDVAFSPNDS 177
Query: 451 LALTIGGDKTLRTWNLVKGLQPLQ*T---WLVK 540
+T D +L+ WN + L+ T W VK
Sbjct: 178 KFVTASDDGSLKVWNFHMSTEELKLTGHGWDVK 210
Score = 35.1 bits (77), Expect = 0.009
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +1
Query: 262 VLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHP 441
++ H+ V VAF+ N + ++ SDDGS+ V + E++ HG V + HP
Sbjct: 159 IVQAHEMEVRDVAFSPNDSKFVTASDDGSLKVWNF-HMSTEELKLTGHGWD-VKTVDWHP 216
Query: 442 SDKLALTIGGDKTLRTWN 495
S L + D ++ W+
Sbjct: 217 SKGLLASGSKDNLVKFWD 234
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 34.7 bits (76), Expect = 0.011
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Frame = +1
Query: 154 THCIS*MHLHSG*ISCIRWDR**--------SSYLRHEDSKRHTVLMNHDGTVNAVAFTN 309
+ CIS +H H+ + C+ +D + L H + L H G VN+V
Sbjct: 343 SECISILHGHTDSVLCLTFDSTLLVSGSADCTVKLWHFSGGKRITLRGHTGPVNSVRIIR 402
Query: 310 NGTHLLSGSDDGSI-IVTRTGNWQIEKIWKKAHGGQPVVDITIHPSDKLALTIGGDKTLR 486
+ +LSGSDD +I I + N + AH G PV + + S + ++ G T++
Sbjct: 403 DRGLVLSGSDDSTIKIWSLETNTCLHTF--SAHIG-PVQSLALADSRLFSCSLDG--TIK 457
Query: 487 TWNLVK 504
W++ K
Sbjct: 458 QWDIEK 463
Score = 25.8 bits (54), Expect = 5.2
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +2
Query: 149 HSHTASVRCISIAGKFLASGGTD 217
H HT SV C++ L SG D
Sbjct: 350 HGHTDSVLCLTFDSTLLVSGSAD 372
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 34.7 bits (76), Expect = 0.011
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Frame = +1
Query: 265 LMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHPS 444
L NH ++ +A + T LLSG DG + + +W++ + + G P++ + + P
Sbjct: 246 LSNHQKSITCLAMNSENTRLLSGGLDGHVKIYNISDWKV--VHGMKYSG-PILSMGLSP- 301
Query: 445 DKLALTIG---GDKTLRTWNLVK 504
D L +G G + RT + K
Sbjct: 302 DSCNLVVGMSNGTLSQRTRRITK 324
Score = 29.1 bits (62), Expect = 0.56
Identities = 21/83 (25%), Positives = 38/83 (45%)
Frame = +1
Query: 265 LMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHPS 444
L H+ V ++ + T L+SG DG+I + T E + +HG +D+ +
Sbjct: 162 LSGHEDYVRTASWMS-ATRLVSGGYDGTIRLWDTRIADPE-VMSFSHG--EAIDVVLPMQ 217
Query: 445 DKLALTIGGDKTLRTWNLVKGLQ 513
+ G +++ W+LV G Q
Sbjct: 218 SGSTVISAGGPSIKVWDLVAGRQ 240
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 34.7 bits (76), Expect = 0.011
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +1
Query: 265 LMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQI---EKIWKKAHGGQPVVDITI 435
L H+G V++++F ++G+ L SGS D ++ + W I I + V+ +
Sbjct: 463 LAGHEGPVSSLSFNSSGSLLASGSWDKTVRI-----WDIFSRSGIVEPLPIPSDVLSLAF 517
Query: 436 HPSDKLALTIGGDKTLRTWNLVKGLQ 513
HP K D L WN+ +G Q
Sbjct: 518 HPDGKEVCVASLDGQLTFWNVQEGKQ 543
Score = 25.4 bits (53), Expect = 6.9
Identities = 8/29 (27%), Positives = 20/29 (68%)
Frame = +1
Query: 271 NHDGTVNAVAFTNNGTHLLSGSDDGSIIV 357
+H ++ + ++++G +++G+DDG I V
Sbjct: 337 SHYDALSTLQYSSDGQRIITGADDGKIKV 365
>SPAC890.04c |||ribosome biogenesis protein Ytm1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 440
Score = 34.7 bits (76), Expect = 0.011
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 397 KAHGGQPVVDITIHPSDKLALTIGGDKTLRTWNLVKG 507
+ H G PV+DI +A ++G D T++TW+L+ G
Sbjct: 266 EGHTG-PVMDIVFSDDPSVAYSVGQDHTIKTWDLITG 301
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 34.3 bits (75), Expect = 0.015
Identities = 19/75 (25%), Positives = 37/75 (49%)
Frame = +1
Query: 274 HDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHPSDKL 453
HD VNA+ + +G + S S D +I + + ++ + + G V + +P +
Sbjct: 464 HDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRG--VWACSFNPFSRQ 521
Query: 454 ALTIGGDKTLRTWNL 498
+ GD+T+R WN+
Sbjct: 522 LASGSGDRTIRIWNV 536
Score = 31.5 bits (68), Expect = 0.11
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +1
Query: 274 HDGTVNAVAFTN--NGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVV-DITIHPS 444
H G ++A+ F N L SG+DD + R + + G V+ +T P+
Sbjct: 144 HGGVISALCFGKHQNTWVLASGADDSRV---RLWDLNSSRSMAVFEGHSSVIRGLTFEPT 200
Query: 445 DKLALTIGGDKTLRTWNLVK 504
L+ DKT++ WN+ K
Sbjct: 201 GSFLLSGSRDKTVQVWNIKK 220
Score = 30.7 bits (66), Expect = 0.18
Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = +1
Query: 235 RHEDSKR-HTVLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGG 411
R E +R ++ + D V A+A T++ L++ + + + + K K AH
Sbjct: 46 RSETGERLFSIKKDEDDYVTALAITSDSKKLIAAFRSRLLTIYEIPSGRRIKSMK-AHE- 103
Query: 412 QPVVDITIHPSDKLALTIGGDKTLRTWNL 498
PV+ +TI P++ L T G + ++ W++
Sbjct: 104 TPVITMTIDPTNTLLATGGAEGLVKVWDI 132
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 34.3 bits (75), Expect = 0.015
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +1
Query: 265 LMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHPS 444
L H V+++ F GT L+SGS D ++ + + ++ AH +P++ ++I
Sbjct: 134 LKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLP-AHS-EPIISVSISAD 191
Query: 445 DKLALTIGGDKTLRTWNLVKG 507
L T D R W+++ G
Sbjct: 192 GTLCATASYDGMARIWDVLSG 212
Score = 31.1 bits (67), Expect = 0.14
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 4/85 (4%)
Frame = +1
Query: 265 LMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWK----KAHGGQPVVDIT 432
L H ++ V + +L S SDD +I + W EK K H V I
Sbjct: 92 LFGHYRGISQVKWATGSKYLASASDDKTIRI-----WDFEKRCSVRCLKGHTNY-VSSID 145
Query: 433 IHPSDKLALTIGGDKTLRTWNLVKG 507
+P L ++ D+T+R WNL G
Sbjct: 146 FNPLGTLLVSGSWDETVRIWNLQDG 170
>SPBC609.03 |||WD repeat protein, human IQWD1
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 33.5 bits (73), Expect = 0.026
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Frame = +1
Query: 265 LMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGN-WQIEKIWKKAHGGQPVVDITIHP 441
L H G VN + ++ +G LLSGSDD +IV N ++ + H Q + P
Sbjct: 41 LTGHTGCVNTLDWSADGEFLLSGSDDTRLIVWDVFNEYKPRHLISTGH-VQNIFSAKFVP 99
Query: 442 --SDKLALTIGGDKTLRTWNL 498
+++ L+ GDK ++ ++L
Sbjct: 100 YSNNRQILSASGDKLIKLFDL 120
Score = 28.7 bits (61), Expect = 0.74
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +1
Query: 271 NHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVD-ITIHPSD 447
N + N + N +++SGSDDG + N I I HG V+ I HP
Sbjct: 669 NVESIKNVNFYGQNDEYVMSGSDDGRFFIWDKLNASILAI---IHGDSEAVNVIEGHPRC 725
Query: 448 KLALTIGGDKTLRTWN 495
G D T++ +N
Sbjct: 726 PTLAVSGIDSTVKIFN 741
>SPAC23H3.05c |swd1||COMPASS complex subunit
Swd1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 398
Score = 33.5 bits (73), Expect = 0.026
Identities = 20/83 (24%), Positives = 37/83 (44%)
Frame = +1
Query: 259 TVLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIH 438
T + H G ++ F+ NG HL SG +GS+++ + + ++ H + + +
Sbjct: 19 TTTLKH-GHATSIRFSTNGYHLASGLVNGSVVIWDLSTFSVSRV-LTGH-TRAIQSVCWS 75
Query: 439 PSDKLALTIGGDKTLRTWNLVKG 507
D+ LT D W+L G
Sbjct: 76 SCDRFLLTASRDWKCILWDLRDG 98
Score = 27.9 bits (59), Expect = 1.3
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +2
Query: 137 TFATHSHTASVRCISIAGKFLASGGTDDKVVILDMKT 247
T H H S+R S G LASG + VVI D+ T
Sbjct: 20 TTLKHGHATSIR-FSTNGYHLASGLVNGSVVIWDLST 55
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 33.1 bits (72), Expect = 0.035
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Frame = +1
Query: 265 LMNHDGTVNAVAFT-NNGTHLLSGSDDGSII----VTRTGNWQIEKIWKKAHGGQPVVDI 429
L H G V +++ N LLSGS D SII V N+ + + H V D
Sbjct: 11 LEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHS-HFVSDC 69
Query: 430 TIHPSDKLALTIGGDKTLRTWNLVKG 507
+ AL+ DKT+R W+L KG
Sbjct: 70 ALSFDSHYALSASWDKTIRLWDLEKG 95
Score = 28.3 bits (60), Expect = 0.98
Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +1
Query: 265 LMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEK---IWKKAHGGQPVVDITI 435
L H V+ A + + + LS S D +I + W +EK + V+ ++I
Sbjct: 59 LTGHSHFVSDCALSFDSHYALSASWDKTIRL-----WDLEKGECTHQFVGHTSDVLSVSI 113
Query: 436 HPSDKLALTIGGDKTLRTWNLV 501
P ++ ++ DKT++ WN++
Sbjct: 114 SPDNRQVVSGSRDKTIKIWNII 135
Score = 26.2 bits (55), Expect = 4.0
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Frame = +1
Query: 274 HDGTVNAVAFTNNGTHL--LSGSDDGSIIVTRTGNWQIEKI-WKKAHGGQP--VVDITIH 438
H V+ V F+ N +L +S D ++ V W +E + +H G V +TI
Sbjct: 147 HSDWVSCVRFSPNPDNLTFVSAGWDKAVKV-----WDLETFSLRTSHYGHTGYVSAVTIS 201
Query: 439 PSDKLALTIGGDKTLRTWNL 498
P L + G D TL W+L
Sbjct: 202 PDGSLCASGGRDGTLMLWDL 221
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 32.7 bits (71), Expect = 0.046
Identities = 23/78 (29%), Positives = 35/78 (44%)
Frame = +1
Query: 265 LMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHPS 444
L H G+V + F L+SGS D +II+ +WQ + K G V + + S
Sbjct: 257 LYGHSGSVLCLDFCRRRNLLVSGSSDSTIII---WDWQNRRPLKVYFGHTDNV-LGVVVS 312
Query: 445 DKLALTIGGDKTLRTWNL 498
+ ++ D T R W L
Sbjct: 313 ENYIISSSRDHTARVWRL 330
Score = 29.1 bits (62), Expect = 0.56
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +2
Query: 149 HSHTASVRCISIAGKFLASGGTDDKVVILDMKTRK 253
H+H + C GKF+ SG +D + I + + K
Sbjct: 386 HAHQRGIACAQYNGKFIVSGSSDLTIRIFEASSGK 420
Score = 25.8 bits (54), Expect = 5.2
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 451 LALTIGGDKTLRTWNLVKG 507
L +T D+TLRTW++ G
Sbjct: 361 LIVTASSDRTLRTWDITTG 379
>SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 373
Score = 32.7 bits (71), Expect = 0.046
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Frame = +1
Query: 250 KRHTVLMNHDGTVNAVAFTNNGTHLLSGSDDGSII-VTRTGNWQIEKIWKKAHGGQP--V 420
K+ T + H ++ +AF ++GT L + SD+G II V + Q ++++ G P +
Sbjct: 179 KQITKIEAHKDSLACLAFNSDGTMLATASDNGRIIRVFAIPSGQ--RLYQFRRGSLPAQI 236
Query: 421 VDITIHPSDKLALTIGGDKTLRTWNL 498
I HP L +T+ + L
Sbjct: 237 YSIAFHPDSSLLTVTSSTQTVHIFRL 262
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 32.3 bits (70), Expect = 0.060
Identities = 17/79 (21%), Positives = 40/79 (50%)
Frame = +1
Query: 271 NHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHPSDK 450
+ D V +AF+ +G +L++G++D I + ++ ++ H Q + + + +
Sbjct: 358 SRDLYVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFS-GHE-QDIYSLDFSHNGR 415
Query: 451 LALTIGGDKTLRTWNLVKG 507
++ GD+T R W++ G
Sbjct: 416 FIVSGSGDRTARLWDVETG 434
Score = 31.1 bits (67), Expect = 0.14
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Frame = +1
Query: 265 LMNHDGTVNAVAFTNNGTHLLSGSDDGSIIV-----TRTGNWQI---EKIWKKAHGGQP- 417
L H +V ++AF+ + + LLSGS D +I V TR+ E I K + G
Sbjct: 480 LEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTD 539
Query: 418 -VVDITIHPSDKLALTIGGDKTLRTWNLVKG 507
V+ + + P + L+ D++++ W+L G
Sbjct: 540 FVLSVAVSPDSRWGLSGSKDRSMQFWDLQTG 570
Score = 30.7 bits (66), Expect = 0.18
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Frame = +1
Query: 262 VLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGN-WQIE--KIWKKAHGGQPVVDIT 432
V H+ + ++ F++NG ++SGS D RT W +E + K V I
Sbjct: 397 VFSGHEQDIYSLDFSHNGRFIVSGSGD------RTARLWDVETGQCILKLEIENGVTAIA 450
Query: 433 IHPSDKLALTIGGDKTLRTWNL 498
I P+D+ D+ +R W++
Sbjct: 451 ISPNDQFIAVGSLDQIIRVWSV 472
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 32.3 bits (70), Expect = 0.060
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Frame = +1
Query: 232 LRHEDSKRHTVLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQI--EKIWKKAH 405
L+ E SKR L V +VAF+ +G +L +G +D I + W I +++++
Sbjct: 324 LQEESSKREGDLY-----VRSVAFSPDGKYLATGVEDQQIRI-----WDIAQKRVYRLLT 373
Query: 406 GG-QPVVDITIHPSDKLALTIGGDKTLRTWNLVKGLQPL 519
G Q + + K ++ GD+T+ W++ G Q L
Sbjct: 374 GHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKL 412
Score = 31.9 bits (69), Expect = 0.080
Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Frame = +1
Query: 265 LMNHDGTVNAVAFTNNGTHLLSGSDDGSI------IVTRTGNWQIEK--IWKKAHGGQP- 417
L H+ +V +VAF+ +G +L+SGS D +I V+ ++ I K+ G
Sbjct: 454 LHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKD 513
Query: 418 -VVDITIHPSDKLALTIGGDKTLRTWN 495
++ +T+ P K ++ D+T++ W+
Sbjct: 514 FILSVTVSPDGKWIISGSKDRTIQFWS 540
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 31.9 bits (69), Expect = 0.080
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
Frame = +1
Query: 241 EDSKRHTVLMN-HDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGN-----WQIEKIWKKA 402
E+ K+ T L + H G V +++ N+ T L S DG I+V + W + A
Sbjct: 518 EEWKQQTSLPHIHKGAVYTISWMNDAT-LCSAGGDGKIVVYQREKHDEALWHVAYEQDHA 576
Query: 403 HGGQPVVDITIHPSDKLALTIGGDKTLRTWN 495
HG + + D+L L+ G D R W+
Sbjct: 577 HGVYEINSLEYLRDDRL-LSGGDDGECRVWS 606
Score = 30.3 bits (65), Expect = 0.24
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 265 LMNHDGTVNAVAFTNNGTHLLSGSDDGSIIV 357
L H TV A+AF+ NG L S +DG++ +
Sbjct: 463 LQGHTNTVWALAFSPNGNTLASADNDGNVFL 493
>SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 352
Score = 31.5 bits (68), Expect = 0.11
Identities = 22/78 (28%), Positives = 36/78 (46%)
Frame = +1
Query: 265 LMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHPS 444
L H G V +V ++ +GT + SGS D S V Q +++ + V + +
Sbjct: 70 LYEHQGPVLSVNWSRDGTKVASGSVDKSAKVFDIQTGQNQQVAAHDDAVRCVRFVEAMGT 129
Query: 445 DKLALTIGGDKTLRTWNL 498
+ T DKTL+ W+L
Sbjct: 130 SPILATGSWDKTLKYWDL 147
>SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 524
Score = 31.5 bits (68), Expect = 0.11
Identities = 14/76 (18%), Positives = 36/76 (47%)
Frame = +1
Query: 271 NHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHPSDK 450
+H + +A +N+G +++G D I++ + + + WK H V+ + +
Sbjct: 206 DHVKEITCLAISNDGRWIVTGGLDHRIVIRDSVTLEPQHCWK--HHRDAVMGLAMRRGTN 263
Query: 451 LALTIGGDKTLRTWNL 498
+ D++++ W+L
Sbjct: 264 EMFSCSADRSIKVWSL 279
>SPCC1235.09 |||histone deacetylase complex
subunit|Schizosaccharomyces pombe|chr 3|||Manual
Length = 564
Score = 31.1 bits (67), Expect = 0.14
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 262 VLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIV 357
V M H V+A++F++NG +L +G G + +
Sbjct: 470 VFMRHTAPVSALSFSHNGRYLATGDTSGGVCI 501
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 30.7 bits (66), Expect = 0.18
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +1
Query: 265 LMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGG-QPVVDITIHP 441
L H TV +A + +L S +D + + + + K+ + HG V + +HP
Sbjct: 201 LTGHIATVRGLAVSPRHPYLFSCGEDKMV---KCWDLETNKVIRHYHGHLSGVYALKLHP 257
Query: 442 SDKLALTIGGDKTLRTWNL 498
+ + +T G D R W++
Sbjct: 258 TLDVLVTAGRDAVARVWDM 276
Score = 26.6 bits (56), Expect = 3.0
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +1
Query: 427 ITIHPSDKLALTIGGDKTLRTWNLVKGLQPL 519
+ + P ++ T GD+T++ W+L G+ L
Sbjct: 169 VDVEPGNQWFCTGAGDRTIKIWDLASGVLKL 199
>SPCC126.01c ||SPCC576.18c|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 369
Score = 30.7 bits (66), Expect = 0.18
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +1
Query: 355 VTRTGNWQIEKIWKKAHGGQPVVDITIHPSDKLAL-TIGGDKTLRTWNLVKGL 510
+T+ G Q+E+ H V + P D AL T DKT+R W+L +G+
Sbjct: 205 ITKVGGSQLEEEGFWGHQSN-VYCLLFDPQDSEALWTASADKTVREWSLYQGI 256
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 30.3 bits (65), Expect = 0.24
Identities = 22/84 (26%), Positives = 38/84 (45%)
Frame = +1
Query: 256 HTVLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITI 435
HT L+ H +V ++ G L+SGS D SI + R E ++ + +
Sbjct: 501 HT-LIGHTDSVRTIS--GYGDILVSGSYDSSIRIWRVSTG--ECLYHLRGHSLRIYSVLY 555
Query: 436 HPSDKLALTIGGDKTLRTWNLVKG 507
P + ++ DK++R W+L G
Sbjct: 556 EPERNICISGSMDKSIRVWDLSTG 579
Score = 25.8 bits (54), Expect = 5.2
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 155 HTASVRCISIAGKFLASGGTDDKVVILDMKT 247
HT SVR IS G L SG D + I + T
Sbjct: 506 HTDSVRTISGYGDILVSGSYDSSIRIWRVST 536
>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 29.9 bits (64), Expect = 0.32
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +2
Query: 134 QTFATHSHTASVRCISIAGKFLASGGTDDKVVILDMKTRKDTL 262
QT +H T + + ++LAS GTDD++ + +M++ ++TL
Sbjct: 240 QTNISHYGTVNGLAWTSDARYLASCGTDDRIRVWNMESGRNTL 282
>SPBC27B12.05 |||WD repeat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 391
Score = 29.5 bits (63), Expect = 0.43
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 262 VLMNHDGTVNAVAFTNNGTHLLSGSDDGSI 351
VL H+ + + F ++GT LLSGS D S+
Sbjct: 96 VLEGHEHNIPCITFNSSGTLLLSGSIDRSL 125
>SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 984
Score = 29.5 bits (63), Expect = 0.43
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Frame = +1
Query: 250 KRHTVLMN--HDGTVNAVAFTNNGTHLLSGSDDGSI-IVTRTGNWQIEKIWKKAHGGQPV 420
+R++VL N H + A+ F +G LLSGS+D + ++ N I + +
Sbjct: 641 QRNSVLQNGLHGREIRAMDFNPSGDLLLSGSEDTKVTLLEFQSNGNIIPLNSVKFHNSGI 700
Query: 421 VDITIHPSDKLALTIGGDKTLRTWNLVK 504
+T SD + + GG + L + L++
Sbjct: 701 QSLTWF-SDDILFSTGGLEELNVYRLIQ 727
Score = 28.7 bits (61), Expect = 0.74
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +1
Query: 259 TVLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEK---IWKKAHGGQPVVDI 429
T L+ H+G + F+++G +L S S+D ++ + W IE + G V
Sbjct: 188 TYLVGHEGACFDLKFSSDGRYLCSVSEDRTLRL-----WSIESSPFLIATGFGHSARVWR 242
Query: 430 TIHPSDKLALTIGGDKTLRTW 492
+ +K T+ D TLR W
Sbjct: 243 CVFLPNKEIATVSEDLTLRLW 263
Score = 25.0 bits (52), Expect = 9.1
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = +1
Query: 316 THLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHPSDK---LALTIGGD 474
++ L GS GS+ + G +W++ H + I I S + L T+G D
Sbjct: 478 SNFLIGSRTGSLALYNIGESNYLSVWRRIHEFDAISSIHIKSSKRDYLLIQTVGRD 533
>SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 556
Score = 29.5 bits (63), Expect = 0.43
Identities = 23/77 (29%), Positives = 40/77 (51%)
Frame = +1
Query: 289 NAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHPSDKLALTIG 468
++V++ N + LL+ G+I + R + + +H G + ++IHP L LT G
Sbjct: 185 SSVSYINQSSKLLA---PGTINIKRLKDANFQA---PSHSG--IRCMSIHPYFPLLLTCG 236
Query: 469 GDKTLRTWNLVKGLQPL 519
D+TLR + L + PL
Sbjct: 237 FDRTLRIYQLDGKVNPL 253
>SPCC790.02 |pep3|vps18, vps18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 900
Score = 29.1 bits (62), Expect = 0.56
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +2
Query: 164 SVRCISIAGKFLASGGTDDKVVILDMKTRKDTL 262
S+RC+++ L T DK++I+D++ +D +
Sbjct: 51 SIRCLAVENNILVMALTSDKLMIVDLERPEDII 83
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 29.1 bits (62), Expect = 0.56
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +1
Query: 262 VLMNHDGT-VNAVAFTNNGTHLLSGSDDGSI-IVTRTGNWQIEKIWKKAHGGQPVVDITI 435
VL DGT V +V + G L GS G + + + + + + G+PV + +
Sbjct: 438 VLPTSDGTSVRSVCVSCCGNFGLIGSSKGVVDVYNMQSGIKRKSFGQSSLSGKPVTAVML 497
Query: 436 HPSDKLALTIGGDKTLRTWNLVKG 507
+++ +T D L+ W+ KG
Sbjct: 498 DNVNRILVTASLDGILKFWDFNKG 521
>SPBC106.09 |cut4|apc1|anaphase-promoting complex subunit
Apc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1458
Score = 28.7 bits (61), Expect = 0.74
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = -1
Query: 565 LFSVGSNTPLLAKFTVKAGVL*LNSMFLMFCHHQ*LELVYQMDELLYLQQADL 407
L VGSN ++ T AG+L + +F CH + E+ M+E+L +++L
Sbjct: 901 LLPVGSNELNISPLTQTAGILGIGLLFHDSCHRRMSEVT--MEEILASNESEL 951
>SPAC4D7.05 |sum1|tif34|translation initiation factor
eIF3i|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 28.7 bits (61), Expect = 0.74
Identities = 21/87 (24%), Positives = 40/87 (45%)
Frame = +1
Query: 253 RHTVLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDIT 432
R +L H+ + + + ++G L S + D I V + N + ++ H G +
Sbjct: 2 RPIILQGHERPLTQIKYNHDGDLLFSCAKDKVINVWFSHNGERLGTYE-GHTGA-IWTCD 59
Query: 433 IHPSDKLALTIGGDKTLRTWNLVKGLQ 513
I+ S L ++ D T+R W++ G Q
Sbjct: 60 INKSSTLMVSGAADNTMRLWDVKTGKQ 86
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 28.3 bits (60), Expect = 0.98
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +1
Query: 415 PVVDITIHPSDKLALTIGGDKTLRTWNLVKG--LQPLQ*TW 531
PV + + SD + +T DKT+R W++V G +Q L W
Sbjct: 437 PVTALALS-SDDVLITGADDKTVRQWDIVTGRCIQTLDFVW 476
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 27.9 bits (59), Expect = 1.3
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = +1
Query: 265 LMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEK-IWKKAHGGQPVVDITIHP 441
L+ H V V+ + +LS S+DG TR + + I K A P+ D+ P
Sbjct: 399 LIGHTRPVFGVSISPQKEFILSCSEDG---FTRLWSKDTKSTIVKYAGHNAPIWDVQFSP 455
Query: 442 SDKLALTIGGDKTLRTWNLVKGLQPLQ 522
T D+T R W+ V+ PL+
Sbjct: 456 FGYYFATASHDQTARLWD-VEHAAPLR 481
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 27.9 bits (59), Expect = 1.3
Identities = 18/78 (23%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +1
Query: 286 VNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEK---IWKKAHGGQPVVDIT-IHPSDKL 453
+N V + G ++L+ ++ + + W ++ I + A G ++D+ ++ S K
Sbjct: 17 INVVKYNRTGKYVLAAGNERVVRL-----WNVKSGACIHEYAGHGHEILDLDLVYDSTKF 71
Query: 454 ALTIGGDKTLRTWNLVKG 507
A + GGDK ++ W++ G
Sbjct: 72 A-SCGGDKFIQVWDVNTG 88
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 27.9 bits (59), Expect = 1.3
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 271 NHDGTVNAVAFTNNGTHLLSGSDDGSI 351
+H G +N++ F NG ++ SDD S+
Sbjct: 394 HHLGGINSITFLENGKRFVTTSDDSSM 420
Score = 26.6 bits (56), Expect = 3.0
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +1
Query: 301 FTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHG-GQPVVDITIHPSDKLALTIGGDK 477
F +G LLSGS D I + + + + G +P+ D++ + L+ DK
Sbjct: 275 FPISGHLLLSGSMDNQIKIWEV--YHDRSLLRTFQGHARPIRDLSFSQDGRSFLSTSFDK 332
Query: 478 TLRTWNLVKG 507
T++ W+ G
Sbjct: 333 TIKLWDTELG 342
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 27.5 bits (58), Expect = 1.7
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +1
Query: 241 EDSKRHTVLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIV 357
+D + L H V + F GT L SGS D IIV
Sbjct: 92 KDGELLITLNGHKSAVTTMDFDKMGTRLASGSMDTDIIV 130
Score = 25.4 bits (53), Expect = 6.9
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 415 PVVDITIHPSDKLALTIGGDKTLRTWNL 498
PV+ + I KL +T DK ++ W L
Sbjct: 578 PVLSMDISYDSKLLVTCSADKNVKIWGL 605
>SPAC1006.02 |||WD repeat protein, human GNB1L
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 368
Score = 27.5 bits (58), Expect = 1.7
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +2
Query: 86 LSGYSILSVETEKIIKQTFATHSHTASVRCISIAGKFLASGGTDDKVVI 232
L ++++ + + K +A SH+ V + AG L S G DD + +
Sbjct: 224 LENVKTVTLDFKAVWKMVYAYKSHSQPVLSVEYAGSKLFSTGADDCICL 272
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 27.5 bits (58), Expect = 1.7
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 295 VAFTNNGTHLLSGSDDGSIIVTRTGN 372
V F+NNG H SGS G + V + N
Sbjct: 178 VRFSNNGNHFASGSWGGQVKVWNSDN 203
>SPBC18H10.06c |swd2|swd2.1|COMPASS complex subunit
Swd2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 357
Score = 27.5 bits (58), Expect = 1.7
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 412 QPVVDITIHPSDKLALTIGGDKTLRTWNL 498
Q V I + P+D+ L+ D T+R W+L
Sbjct: 113 QTVTSIDVSPADETFLSASLDNTIRLWDL 141
>SPAC23H3.08c |bub3||mitotic spindle checkpoint protein
Bub3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 320
Score = 27.1 bits (57), Expect = 2.3
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 415 PVVDITIHPSDKLALTIGGDKTLRTWNL 498
PV D+ HP + T GGD + W++
Sbjct: 235 PVNDLKFHPIHQTLATAGGDGVVAFWDI 262
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1334
Score = 27.1 bits (57), Expect = 2.3
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 277 DGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGN 372
D VNA+ ++G LL G+D G + R N
Sbjct: 995 DNKVNAIGVYDSGRRLLYGTDTGVYVSLRKAN 1026
>SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 612
Score = 27.1 bits (57), Expect = 2.3
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +1
Query: 250 KRHTVLMNHDGTVNAVAFTNNGTHLLSGSDDGSI 351
K H H+G V V H+ SG DG+I
Sbjct: 330 KPHLTFYGHEGPVLCVCVPKATHHIFSGGHDGTI 363
>SPAC25H1.06 |||histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 408
Score = 27.1 bits (57), Expect = 2.3
Identities = 17/74 (22%), Positives = 30/74 (40%)
Frame = +1
Query: 277 DGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHPSDKLA 456
D VN V + + T+L +D I Q + K P+ + +PS
Sbjct: 232 DSPVNDVEYHPHHTNLYIAVNDNGIAFICDNRLQ-QTCSKTVKASNPLFSVRHNPSIATL 290
Query: 457 LTIGGDKTLRTWNL 498
+G ++ L+ W+L
Sbjct: 291 FALGSEQDLQLWDL 304
>SPAC1B3.13 |||U3 snoRNP-associated protein Nan1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 800
Score = 27.1 bits (57), Expect = 2.3
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 403 HGGQPVVD-ITIHPSDKLALTIGGDKTLRTWNLVKG 507
HG VV + + S +T+G D TLR W L+ G
Sbjct: 492 HGNLEVVTALKMMTSSNRFITVGTDATLRIWALLPG 527
>SPAC959.03c |||U3 snoRNP-associated protein
Utp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 520
Score = 26.6 bits (56), Expect = 3.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 403 HGGQPVVDITIHPSDKLALTIGGDKTLRTWNL 498
H G PV D+ ++ + +T G D L+ W+L
Sbjct: 264 HRG-PVRDLAVNRDGRYMVTAGADSLLKVWDL 294
>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 26.6 bits (56), Expect = 3.0
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 226 SYLRHEDSKRHTVLMNHDGTVNAVAFTNNGTHLLSGSDDG 345
S LR ++ V + H G V ++ +G L SG DDG
Sbjct: 362 SELRPFPTRCTNVFIGHKGRVRCLSVHVSGNWLASGGDDG 401
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 26.2 bits (55), Expect = 4.0
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Frame = +1
Query: 289 NAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAH-----GGQPVVDITIHPS-DK 450
N F ++G +++ GS+D + + + K KK H +P+ P+ K
Sbjct: 496 NRAYFDDDGNYVICGSEDHQVFIWDLPPQHMHKTKKKKHEHFKASVRPITAAVFAPTKTK 555
Query: 451 LALTIGGD 474
LT+ GD
Sbjct: 556 QLLTLSGD 563
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 26.2 bits (55), Expect = 4.0
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = +1
Query: 427 ITIHPSDKLALTIGGDKTLRTWNLVKGLQ 513
+ + P +T+G D +R W LV+ ++
Sbjct: 1221 VLVSPDSSFFVTLGSDGVVRAWQLVESVR 1249
>SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 430
Score = 26.2 bits (55), Expect = 4.0
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Frame = +1
Query: 274 HDGTVNAVAFTNNGTHLLSG-SDDGSIIVTRTGNWQIEKIWKKAHGGQPVVD-ITIHP-S 444
H VN V F LL+ SDD ++ + T E+ K ++ + I+P +
Sbjct: 234 HTDIVNDVQFHPQHEALLASVSDDCTLQIHDTRLNPEEEAPKVIQAHSKAINAVAINPFN 293
Query: 445 DKLALTIGGDKTLRTWNLVKGLQPL 519
D L T DKT+ W+L Q L
Sbjct: 294 DYLLATASADKTVALWDLRNPYQRL 318
>SPAC824.04 |||WD repeat protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 26.2 bits (55), Expect = 4.0
Identities = 17/81 (20%), Positives = 35/81 (43%)
Frame = +1
Query: 256 HTVLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITI 435
HT+ G + FT++ +LL + G+ + + ++I + V I +
Sbjct: 58 HTITCFETG-IEVARFTHHDHNLLLSTTKGNKDIQYVSIYDNKRISYFSGHTDIVSSIEV 116
Query: 436 HPSDKLALTIGGDKTLRTWNL 498
P + ++ DKTL+ W +
Sbjct: 117 SPIEDQFVSTANDKTLKLWKM 137
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 26.2 bits (55), Expect = 4.0
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +2
Query: 83 FLSGYSILSVETEKIIKQTFATHSHTASVRCISIA--GKFLASGGTDDKVVILDMKTRK 253
FLS Y + +E K+ H H+ V IS + G++LAS D +I D+ K
Sbjct: 190 FLSDYK--ADPSELPTKEYHVFHDHSDEVWQISYSHNGRYLASASKDKTAIIFDVVNLK 246
>SPBC29B5.02c |isp4||OPT oligopeptide transporter family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 785
Score = 25.8 bits (54), Expect = 5.2
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3
Query: 590 FLYRLVKIFIFCWQQYTFT 534
F Y L KIF WQ+Y FT
Sbjct: 703 FNYYLKKIFADWWQKYNFT 721
>SPBC27.05 |||dubious|Schizosaccharomyces pombe|chr 2|||Manual
Length = 108
Score = 25.8 bits (54), Expect = 5.2
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 501 QRTPAFTVNLASKGVLLPTENKNFHQTVQEFFL 599
+ T AFT+ LASK V+ + F+ T + +L
Sbjct: 44 ETTDAFTLQLASKEVITSSIYNTFNNTNEHMYL 76
>SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit
Git5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 305
Score = 25.8 bits (54), Expect = 5.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 176 ISIAGKFLASGGTDDKVVILDMKTRKDTLF 265
IS GK+L S T+D +++ D+ T F
Sbjct: 29 ISTDGKYLLSASTNDVLLVWDLHTSNKVAF 58
>SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 556
Score = 25.4 bits (53), Expect = 6.9
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +1
Query: 229 YLRHEDSKRHTVLMNH--DGTVNAVAFTNNGTHLLSGSDDGSI 351
YL S TV+ N TV ++ + GTHL G+ +GS+
Sbjct: 273 YLWSGISSEVTVMHNFYPTDTVTSLRWVQRGTHLAVGTHNGSV 315
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 25.4 bits (53), Expect = 6.9
Identities = 11/42 (26%), Positives = 23/42 (54%)
Frame = +1
Query: 262 VLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEK 387
+L H V+ F + ++SGS+DG++ + T ++ + K
Sbjct: 223 ILEGHTNNVSFAFFHSKFPIIISGSEDGTVKIWHTLSYSLIK 264
>SPBC15D4.04 |gpt2|gpt,
alg7|UDP-N-acetylglucosamine--dolichyl-phosphateN-
acetylglucosaminephosphotransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 446
Score = 25.4 bits (53), Expect = 6.9
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = -2
Query: 600 LRRILVPSGENFYFLLAAIHLY*PSSL 520
L+R L+ G +YF +AA+ ++ P+S+
Sbjct: 188 LKRSLINLGFLYYFYMAAVAIFCPNSI 214
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase kinase
Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 25.4 bits (53), Expect = 6.9
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 238 HEDSKRHTVLMNHDGTVNAVAFTNNGTHLLSGS 336
H+D K +L +H+G + FT+ G+ +SGS
Sbjct: 1242 HQDVKPENILFDHNGIMK---FTDFGSAKMSGS 1271
>SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor
Raf1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 638
Score = 25.4 bits (53), Expect = 6.9
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +2
Query: 98 SILSVETEKIIKQTFATHSHTASVRCISIAGKFLASGGTDDKVVILDMK 244
+I S+E+ + Q T S C S FL +G D+ V + DM+
Sbjct: 281 TIQSLESHYKLNQVGEKEYSTISDLCFSKGNLFLYTGAFDNAVKVWDME 329
>SPAC343.17c |||WD repeat protein, human WDR70
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 576
Score = 25.0 bits (52), Expect = 9.1
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +1
Query: 340 DGSIIVTRT-GNWQIEKIWK-KAHGGQPVVDITIHP-SDKLALTIGGDKTLRTWNL 498
DGS+IV + G+ I ++ K H + + D P S ++ LT G D T R W++
Sbjct: 173 DGSLIVRFSKGDQYIRNMYNTKGHIAE-ITDGCWQPDSSQIFLTTGYDSTARIWDV 227
>SPCC4G3.09c |gyp3||GTPase activating protein
Gyp3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 635
Score = 25.0 bits (52), Expect = 9.1
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = +3
Query: 342 WIYYSYKNRQLANRKNMEKSTWRSACCR 425
W YYS L + ++ WR AC +
Sbjct: 310 WFYYSGGYELLQRNPKLYETLWRCACIK 337
>SPBC1A4.07c |||U3 snoRNP-associated protein
Sof1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 25.0 bits (52), Expect = 9.1
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 238 HEDSKRHTVLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTR 363
H HT M V AV F+ + ++ SGSDD ++ + R
Sbjct: 306 HSRDVYHTKRMQR---VTAVKFSMDAQYIFSGSDDSNVRLWR 344
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,728,816
Number of Sequences: 5004
Number of extensions: 58029
Number of successful extensions: 298
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 284
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 283719918
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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