Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20115
(637 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 42 5e-04
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 41 6e-04
At1g65030.1 68414.m07371 transducin family protein / WD-40 repea... 41 8e-04
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 41 8e-04
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 40 0.001
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 40 0.002
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 39 0.002
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 39 0.003
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 38 0.004
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 38 0.006
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 38 0.006
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 38 0.007
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 38 0.007
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 38 0.007
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 37 0.010
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 37 0.010
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 37 0.010
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 37 0.010
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 37 0.010
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 37 0.010
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 37 0.010
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 37 0.013
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 37 0.013
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 37 0.013
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 37 0.013
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 37 0.013
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 36 0.023
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 36 0.023
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 36 0.023
At3g52190.1 68416.m05731 transducin family protein / WD-40 repea... 36 0.023
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 36 0.030
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 36 0.030
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 36 0.030
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 35 0.039
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 35 0.039
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 35 0.039
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 35 0.039
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 33 0.12
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 33 0.12
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 33 0.12
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 33 0.12
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 33 0.12
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 33 0.12
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 33 0.16
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 33 0.16
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 33 0.16
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 33 0.16
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 33 0.16
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 33 0.21
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 32 0.28
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 32 0.28
At5g14050.1 68418.m01644 transducin family protein / WD-40 repea... 32 0.37
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 32 0.37
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 32 0.37
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 31 0.48
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 31 0.48
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 31 0.48
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 31 0.48
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 31 0.64
At1g05670.1 68414.m00588 UDP-glucoronosyl/UDP-glucosyl transfera... 31 0.64
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 31 0.85
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 31 0.85
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 30 1.1
At4g30510.2 68417.m04332 transport protein-related weak similari... 30 1.1
At4g30510.1 68417.m04331 transport protein-related weak similari... 30 1.1
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 30 1.1
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 30 1.1
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 30 1.5
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 30 1.5
At3g62770.2 68416.m07051 transport protein-related weak similari... 29 2.0
At3g62770.1 68416.m07052 transport protein-related weak similari... 29 2.0
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 29 2.0
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 29 2.0
At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p pro... 29 2.6
At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p pro... 29 2.6
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 29 2.6
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 29 3.4
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 29 3.4
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 29 3.4
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 29 3.4
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 29 3.4
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 29 3.4
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 29 3.4
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 29 3.4
At1g08190.1 68414.m00905 vacuolar assembly protein, putative (VP... 29 3.4
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 28 4.5
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 28 4.5
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 28 4.5
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 28 4.5
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 28 4.5
At1g27470.1 68414.m03349 transducin-related / WD-40 repeat prote... 28 4.5
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 28 6.0
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 28 6.0
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 27 7.9
At5g11240.1 68418.m01313 transducin family protein / WD-40 repea... 27 7.9
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 27 7.9
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/86 (25%), Positives = 43/86 (50%)
Frame = +1
Query: 250 KRHTVLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDI 429
K +V+ HD +N+VA N + + +GS+D + + R + + + K H + + +
Sbjct: 490 KTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPD-LVHVVTLKGH-KRRIFSV 547
Query: 430 TIHPSDKLALTIGGDKTLRTWNLVKG 507
D+ +T GDKT++ W + G
Sbjct: 548 EFSTVDQCVMTASGDKTVKIWAISDG 573
Score = 32.7 bits (71), Expect = 0.21
Identities = 23/88 (26%), Positives = 37/88 (42%)
Frame = +1
Query: 244 DSKRHTVLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVV 423
DS + + T+ A+A + + L S I V + + WK H G PV+
Sbjct: 49 DSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWK-GHEG-PVM 106
Query: 424 DITIHPSDKLALTIGGDKTLRTWNLVKG 507
+ H S L T G D+ + W++ G
Sbjct: 107 GMACHASGGLLATAGADRKVLVWDVDGG 134
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 41.1 bits (92), Expect = 6e-04
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Frame = +1
Query: 247 SKRHTVLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIV---TRTGNWQIEKIWKKAHGGQP 417
S+ +L +H V + F++NG +L S S D + I+ + G+ ++ H +P
Sbjct: 264 SQTAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHH--KP 321
Query: 418 VVDITIHPSDKLALTIGGDKTLRTWNLVKG 507
V+ I P D+ LT G ++ +R W++ G
Sbjct: 322 VIAILWSPDDRQVLTCGAEEVIRRWDVDSG 351
Score = 30.7 bits (66), Expect = 0.85
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +1
Query: 229 YLRHEDSKRHTV-LMNHDGTVNAVAFTNNGTHLL-SGSDDGSI 351
Y+ H + + V L H G VN V+++ H+L S SDDG+I
Sbjct: 514 YIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTI 556
>At1g65030.1 68414.m07371 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to PAK/PLC-interacting protein 1 (GI:14211689)
[Homo sapiens]
Length = 345
Score = 40.7 bits (91), Expect = 8e-04
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Frame = +1
Query: 271 NHDGTVNAVAFTNNGT-----HLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITI 435
NH ++ A++F + +L+S + DGS+ + T + + K ++ + V D+ I
Sbjct: 81 NHAASITALSFYTPSSLSFPRNLISAAADGSVAIFDTDPFVLLKSFRPHK--KAVNDLAI 138
Query: 436 HPSDKLALTIGGDKTLRTWNLVKG 507
HPS KLAL + D+ NLV+G
Sbjct: 139 HPSGKLALAVYRDEFFAMLNLVRG 162
Score = 36.3 bits (80), Expect = 0.017
Identities = 17/66 (25%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Frame = +2
Query: 59 VVVGTYEGFLSGYSIL----SVETEKI-IKQTFATHSHTASVRCISIAGKFLASGGTDDK 223
++ G+YE F+ G+ + E++ + + F+ SH + + ++ +G ASGG+DD
Sbjct: 3 IIAGSYERFIWGFKLKPTKHDAESQTLTLSPLFSYPSHISPITTVACSGPAAASGGSDDT 62
Query: 224 VVILDM 241
+ + D+
Sbjct: 63 IHLYDL 68
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 40.7 bits (91), Expect = 8e-04
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Frame = +1
Query: 250 KRHTV---LMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPV 420
KRHT+ L H VNA+A ++G+ L SGS D SI+V + + A G
Sbjct: 268 KRHTLVATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDK 327
Query: 421 VDITIHPSDKLALTIGGDKTLRTW 492
+++ L L+ D+T+R W
Sbjct: 328 AILSLFNVSDLLLSGSADRTVRIW 351
Score = 29.5 bits (63), Expect = 2.0
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +1
Query: 187 G*ISCIRWDR**SSYLRHEDSKRHTVLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIV 357
G I + WD+ + R D + + HD VNA+A + NGT + +GS D I V
Sbjct: 206 GFIYSVSWDKTLKIW-RASDLRCKESIKAHDDAVNAIAVSTNGT-VYTGSADRRIRV 260
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 39.9 bits (89), Expect = 0.001
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +1
Query: 250 KRHTVLMNHDGTVNAVAFTNNGTHLLSGSDD--GSIIVTRTGNWQIEKIWKKAHGGQPVV 423
K H+ H VN + ++ +GT ++ S D G I +TG+ E + H G +
Sbjct: 42 KFHSSHREHSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGS-IY 100
Query: 424 DITIHPSDKLALTIGGDKTLRTWNLVK 504
++ P K LT+ DK+ + W + +
Sbjct: 101 AVSWSPDSKRVLTVSADKSAKVWEVAE 127
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +1
Query: 265 LMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIE--KIWKKAHGG-QPVVDITI 435
L H G V +A +N T++ S DD + W +E K+ + HG V + +
Sbjct: 208 LTGHIGQVRGLAVSNRHTYMFSAGDDKQVKC-----WDLEQNKVIRSYHGHLHGVYCLAL 262
Query: 436 HPSDKLALTIGGDKTLRTWNLVKGLQ 513
HP+ + LT G D R W++ +Q
Sbjct: 263 HPTLDVVLTGGRDSVCRVWDIRTKMQ 288
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 39.1 bits (87), Expect = 0.002
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Frame = +1
Query: 265 LMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQP--VVDITIH 438
L H G VN V+F G L+SGSDD +++ +WQ+ + H G V
Sbjct: 55 LEKHKGCVNTVSFNAEGDVLISGSDDRRVVL---WDWQLGNVKLSFHSGHANNVFQAKFM 111
Query: 439 P--SDKLALTIGGDKTLRTWNLVKG 507
P D+ +T D +R ++++G
Sbjct: 112 PFSDDRTIVTCAADGMVRRASILEG 136
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/75 (29%), Positives = 37/75 (49%)
Frame = +1
Query: 286 VNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHPSDKLALTI 465
+ +AF +G+ L + DD I + T + I ++ K H G PV + HP+ +L +I
Sbjct: 107 IRVLAFNGSGSLLAAAGDDEGIKLINTFDGSIVRVLK-GHKG-PVTGLDFHPNGELLASI 164
Query: 466 GGDKTLRTWNLVKGL 510
T+ W L G+
Sbjct: 165 DTTGTVLCWELQNGV 179
Score = 27.5 bits (58), Expect = 7.9
Identities = 19/83 (22%), Positives = 37/83 (44%)
Frame = +1
Query: 259 TVLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIH 438
T+L +H V ++A +N+ T L SGS D + + + + + + P+ + +
Sbjct: 56 TILRHHQDGVTSLALSNDSTLLASGSIDHCVKLYKFPSGEFQT--NITRFTLPIRVLAFN 113
Query: 439 PSDKLALTIGGDKTLRTWNLVKG 507
S L G D+ ++ N G
Sbjct: 114 GSGSLLAAAGDDEGIKLINTFDG 136
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 38.3 bits (85), Expect = 0.004
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +1
Query: 250 KRHTVLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGG-QPVVD 426
K +T +N +++ NG ++SGS+D + + + +K+ +K G + V++
Sbjct: 234 KTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNS---KKLLQKLEGHTETVMN 290
Query: 427 ITIHPSDKLALTIGGDKTLRTWNLVK 504
+ HP++ L + DKT+R W K
Sbjct: 291 VACHPTENLIASGSLDKTVRIWTQKK 316
Score = 36.3 bits (80), Expect = 0.017
Identities = 25/79 (31%), Positives = 34/79 (43%)
Frame = +1
Query: 262 VLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHP 441
VL H V AV F +G+ ++S S DG + +G K PV + P
Sbjct: 150 VLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDEN-PPVSFVRFSP 208
Query: 442 SDKLALTIGGDKTLRTWNL 498
+ K L D TLR WN+
Sbjct: 209 NGKFILVGTLDNTLRLWNI 227
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = +1
Query: 274 HDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIE--KIWKKAHG-GQPVVDITIHPS 444
H+ ++ VAF+++ ++S SDD ++ + W +E + K G + +P
Sbjct: 70 HENGISDVAFSSDARFIVSASDDKTLKL-----WDVETGSLIKTLIGHTNYAFCVNFNPQ 124
Query: 445 DKLALTIGGDKTLRTWNLVKG 507
+ ++ D+T+R W++ G
Sbjct: 125 SNMIVSGSFDETVRIWDVTTG 145
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 37.9 bits (84), Expect = 0.006
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 265 LMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQP-VVDITIHP 441
L H G VNA+A+ +NG+ L+SGSDD I + + ++ H
Sbjct: 46 LEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPET 105
Query: 442 SDKLALTIGGDKTLRTWN 495
SD+L ++ GD +R +N
Sbjct: 106 SDELVVSGAGDAEVRLFN 123
Score = 36.7 bits (81), Expect = 0.013
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Frame = +1
Query: 244 DSKRHTVLMNHDGT-VNAVAFTNN-GTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQP 417
D KR V + GT + +F G ++ SGSDDG + Q ++ K G +
Sbjct: 608 DMKRRYVGHCNVGTDIKQASFLGQRGEYIASGSDDGRWFIWEK---QTGRLMKVLVGDES 664
Query: 418 VVD-ITIHPSDKLALTIGGDKTLRTWN 495
V++ I HP D + T G D T++ W+
Sbjct: 665 VLNCIQCHPFDSVVATSGIDNTIKIWS 691
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 37.9 bits (84), Expect = 0.006
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +1
Query: 274 HDGTVNAVAFTNNGTHLLSGSDDGSIIV-TRTGNWQIEKIWKKAHGGQPVVDITIHPSDK 450
H VN + FT +G ++SG +D + V T + + K+H G+ + + HP +
Sbjct: 235 HTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEF--KSHEGK-IQSLDFHPHEF 291
Query: 451 LALTIGGDKTLRTWNL 498
L T DKT++ W+L
Sbjct: 292 LLATGSADKTVKFWDL 307
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 37.5 bits (83), Expect = 0.007
Identities = 22/75 (29%), Positives = 39/75 (52%)
Frame = +1
Query: 274 HDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHPSDKL 453
H VN + FT +G ++SG +D + V ++ +K +H GQ + + HP + L
Sbjct: 142 HTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFK-SHEGQ-IQSLDFHPHEFL 199
Query: 454 ALTIGGDKTLRTWNL 498
T D+T++ W+L
Sbjct: 200 LATGSADRTVKFWDL 214
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 37.5 bits (83), Expect = 0.007
Identities = 22/75 (29%), Positives = 39/75 (52%)
Frame = +1
Query: 274 HDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHPSDKL 453
H VN + FT +G ++SG +D + V ++ +K +H GQ + + HP + L
Sbjct: 142 HTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFK-SHEGQ-IQSLDFHPHEFL 199
Query: 454 ALTIGGDKTLRTWNL 498
T D+T++ W+L
Sbjct: 200 LATGSADRTVKFWDL 214
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 37.5 bits (83), Expect = 0.007
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +1
Query: 286 VNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIE--KIWKKAHGGQPVVDITIHPSDKLAL 459
+ A+A N GT+L+ G G I + W++ K+ KK HG V + D L
Sbjct: 81 IKALAANNEGTYLVGGGISGDIYL-----WEVATGKLLKKWHGHYRSVTCLVFSGDDSLL 135
Query: 460 TIGG-DKTLRTWNLVK 504
G D ++R W+L++
Sbjct: 136 VSGSQDGSIRVWSLIR 151
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 37.1 bits (82), Expect = 0.010
Identities = 21/87 (24%), Positives = 42/87 (48%)
Frame = +1
Query: 244 DSKRHTVLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVV 423
++KR + H V++V ++ NG + S S+D + + + I ++ ++ G
Sbjct: 664 NNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDAVKLWSLSSGDCIHEL---SNSGNKFH 720
Query: 424 DITIHPSDKLALTIGGDKTLRTWNLVK 504
+ HPS L IGG + + WN ++
Sbjct: 721 SVVFHPSYPDLLVIGGYQAIELWNTME 747
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 37.1 bits (82), Expect = 0.010
Identities = 21/87 (24%), Positives = 42/87 (48%)
Frame = +1
Query: 244 DSKRHTVLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVV 423
++KR + H V++V ++ NG + S S+D + + + I ++ ++ G
Sbjct: 666 NNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDAVKLWSLSSGDCIHEL---SNSGNKFH 722
Query: 424 DITIHPSDKLALTIGGDKTLRTWNLVK 504
+ HPS L IGG + + WN ++
Sbjct: 723 SVVFHPSYPDLLVIGGYQAIELWNTME 749
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 37.1 bits (82), Expect = 0.010
Identities = 21/87 (24%), Positives = 42/87 (48%)
Frame = +1
Query: 244 DSKRHTVLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVV 423
++KR + H V++V ++ NG + S S+D + + + I ++ ++ G
Sbjct: 666 NNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDAVKLWSLSSGDCIHEL---SNSGNKFH 722
Query: 424 DITIHPSDKLALTIGGDKTLRTWNLVK 504
+ HPS L IGG + + WN ++
Sbjct: 723 SVVFHPSYPDLLVIGGYQAIELWNTME 749
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 37.1 bits (82), Expect = 0.010
Identities = 21/87 (24%), Positives = 42/87 (48%)
Frame = +1
Query: 244 DSKRHTVLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVV 423
++KR + H V++V ++ NG + S S+D + + + I ++ ++ G
Sbjct: 666 NNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDAVKLWSLSSGDCIHEL---SNSGNKFH 722
Query: 424 DITIHPSDKLALTIGGDKTLRTWNLVK 504
+ HPS L IGG + + WN ++
Sbjct: 723 SVVFHPSYPDLLVIGGYQAIELWNTME 749
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 37.1 bits (82), Expect = 0.010
Identities = 21/87 (24%), Positives = 42/87 (48%)
Frame = +1
Query: 244 DSKRHTVLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVV 423
++KR + H V++V ++ NG + S S+D + + + I ++ ++ G
Sbjct: 666 NNKRVNIFKGHSSNVHSVCWSPNGELVASVSEDAVKLWSLSSGDCIHEL---SNSGNKFH 722
Query: 424 DITIHPSDKLALTIGGDKTLRTWNLVK 504
+ HPS L IGG + + WN ++
Sbjct: 723 SVVFHPSYPDLLVIGGYQAIELWNTME 749
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 37.1 bits (82), Expect = 0.010
Identities = 19/77 (24%), Positives = 39/77 (50%)
Frame = +1
Query: 268 MNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHPSD 447
++H V AV F G + SGS+DGS+ + + ++ + ++ PV + +HP+
Sbjct: 81 VSHTKNVMAVGFQYTGHMMYSGSEDGSV---KIWDLRVRECQREFRSVSPVNTVVLHPNQ 137
Query: 448 KLALTIGGDKTLRTWNL 498
++ + +R W+L
Sbjct: 138 TELISGDQNGNIRVWDL 154
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Frame = +1
Query: 310 NGTHLLSGSDDGSIIVTRT-----GNWQIEKIWKKAHGGQPVVDITIHPSDKLALTIGGD 474
+GT +++ +D G+ V R+ + E + K ++ + P +K T D
Sbjct: 179 DGTMVVAANDRGTCYVWRSLCERQTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSD 238
Query: 475 KTLRTWNL 498
KT++ WNL
Sbjct: 239 KTVKIWNL 246
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 37.1 bits (82), Expect = 0.010
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Frame = +1
Query: 262 VLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTR---TGNWQIEKIWKKAHGGQPVVDIT 432
VL HD VN AF ++SG+DD + + R T W+++ + + H V +
Sbjct: 199 VLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTL--RGHMNN-VSSVM 255
Query: 433 IHPSDKLALTIGGDKTLRTWNLVK--GLQ 513
H + ++ DK++R W+ K GLQ
Sbjct: 256 FHAKQDIIVSNSEDKSIRVWDATKRTGLQ 284
Score = 35.5 bits (78), Expect = 0.030
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +1
Query: 265 LMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHG-GQPVVDITIHP 441
L+ H + V F + ++S SDD +I R NWQ G V+ + HP
Sbjct: 89 LLGHLDYIRTVQFHHEYPWIVSASDDQTI---RIWNWQSRTCVSVLTGHNHYVMCASFHP 145
Query: 442 SDKLALTIGGDKTLRTWNL 498
+ L ++ D+T+R W++
Sbjct: 146 KEDLVVSASLDQTVRVWDI 164
Score = 27.9 bits (59), Expect = 6.0
Identities = 19/74 (25%), Positives = 31/74 (41%)
Frame = +1
Query: 274 HDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHPSDKL 453
H+G V V F N+ +SG DD I V N + ++ + + H
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRC--LFTLLGHLDYIRTVQFHHEYPW 107
Query: 454 ALTIGGDKTLRTWN 495
++ D+T+R WN
Sbjct: 108 IVSASDDQTIRIWN 121
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 36.7 bits (81), Expect = 0.013
Identities = 18/76 (23%), Positives = 35/76 (46%)
Frame = +1
Query: 280 GTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHPSDKLAL 459
G +N V +++ G+ ++ S DG+I + + + + AHG V + L
Sbjct: 175 GAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVL 234
Query: 460 TIGGDKTLRTWNLVKG 507
+ G D T++ W + G
Sbjct: 235 SSGKDSTVKLWEIGSG 250
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 36.7 bits (81), Expect = 0.013
Identities = 18/76 (23%), Positives = 35/76 (46%)
Frame = +1
Query: 280 GTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHPSDKLAL 459
G +N V +++ G+ ++ S DG+I + + + + AHG V + L
Sbjct: 267 GAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVL 326
Query: 460 TIGGDKTLRTWNLVKG 507
+ G D T++ W + G
Sbjct: 327 SSGKDSTVKLWEIGSG 342
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 36.7 bits (81), Expect = 0.013
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 18/111 (16%)
Frame = +1
Query: 232 LRHEDSKRHTV--LMNHDGTVNAVAFTNNGTHLLSGSDDGSIIV---------TRTGNWQ 378
L++ D+K + L +H G+VN V + N ++ SGSDD I + T G+ +
Sbjct: 42 LQNIDTKERLLATLRDHFGSVNCVRWAKNSRYVASGSDDQVIQIHERKPGSGTTEFGSGE 101
Query: 379 IEKI--WK-----KAHGGQPVVDITIHPSDKLALTIGGDKTLRTWNLVKGL 510
+ WK + H VVD+ P D + + D T+ WN+ G+
Sbjct: 102 APDVENWKAVMTLRGHTAD-VVDLNWSPDDSMLASGSLDNTVHIWNMRTGM 151
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 259 TVLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNW 375
TVL H V V + G+ + S SDD ++I+ RT +W
Sbjct: 154 TVLRGHLSLVKGVTWDPIGSFIASQSDDKTVIIWRTSDW 192
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 36.7 bits (81), Expect = 0.013
Identities = 22/80 (27%), Positives = 33/80 (41%)
Frame = +1
Query: 268 MNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHPSD 447
M+ G+ A + L SG DGSI V +W V ++ +
Sbjct: 848 MHQSGSGAVTALIYHKGLLFSGFSDGSIRVWNVNKKIATLLWDIKEHKSTVTCFSLSETG 907
Query: 448 KLALTIGGDKTLRTWNLVKG 507
+ L+ DKT+R W +VKG
Sbjct: 908 ECVLSGSADKTIRVWQIVKG 927
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 36.7 bits (81), Expect = 0.013
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +1
Query: 265 LMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHG-GQPVVDITIHP 441
L+ H + V F + ++S SDD +I R NWQ G V+ + HP
Sbjct: 89 LLGHLDYIRTVQFHHENPWIVSASDDQTI---RIWNWQSRTCISVLTGHNHYVMCASFHP 145
Query: 442 SDKLALTIGGDKTLRTWNL 498
+ L ++ D+T+R W++
Sbjct: 146 KEDLVVSASLDQTVRVWDI 164
Score = 35.1 bits (77), Expect = 0.039
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Frame = +1
Query: 262 VLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTR---TGNWQIEKIWKKAHGGQPVVDIT 432
VL HD VN +F ++SG+DD + + R T W+++ + + H V +
Sbjct: 199 VLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTL--RGHMNN-VSSVM 255
Query: 433 IHPSDKLALTIGGDKTLRTWNLVK 504
H + ++ DK++R W+ K
Sbjct: 256 FHAKQDIIVSNSEDKSIRVWDATK 279
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +1
Query: 274 HDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVV-DITIHPSDK 450
H+G V V F N+ +SG DD I + N++ + G + + H +
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKI---KVWNYKTHRCLFTLLGHLDYIRTVQFHHENP 106
Query: 451 LALTIGGDKTLRTWN 495
++ D+T+R WN
Sbjct: 107 WIVSASDDQTIRIWN 121
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 35.9 bits (79), Expect = 0.023
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +1
Query: 262 VLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRT-GNWQIEKIWKKAHGGQPVVDITIH 438
+L+ H V V F+N+G +L + S D + I+ + + ++E PV ++
Sbjct: 219 ILVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWS 278
Query: 439 PSDKLALTIGGDKTLRTWNLVKGL 510
P D LT G + L+ W++ G+
Sbjct: 279 PDDTKLLTCGNAEVLKLWDVDTGV 302
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 35.9 bits (79), Expect = 0.023
Identities = 19/81 (23%), Positives = 41/81 (50%)
Frame = +1
Query: 262 VLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHP 441
+L HD + ++ +++N +++SG D G++ + N K K AH + + D++
Sbjct: 160 ILQAHDQPIRSMVWSHNENYMVSGDDGGTLKYWQ-NNMNNVKANKTAH-KESIRDLSFCK 217
Query: 442 SDKLALTIGGDKTLRTWNLVK 504
+D + D T++ W+ K
Sbjct: 218 TDLKFCSCSDDTTVKVWDFTK 238
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 35.9 bits (79), Expect = 0.023
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +1
Query: 265 LMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIE--KIWKKAHGG-QPVVDITI 435
L H V +A +N T++ S DD + W +E K+ + HG V + +
Sbjct: 214 LTGHIEQVRGLAVSNRHTYMFSAGDDKQVKC-----WDLEQNKVIRSYHGHLSGVYCLAL 268
Query: 436 HPSDKLALTIGGDKTLRTWNLVKGLQ 513
HP+ + LT G D R W++ +Q
Sbjct: 269 HPTLDVLLTGGRDSVCRVWDIRTKMQ 294
>At3g52190.1 68416.m05731 transducin family protein / WD-40 repeat
family protein similar to St12p protein (GI:166878)
{Arabidopsis thaliana}; contains Pfam profile: PF00400
WD domain, G-beta repeat
Length = 398
Score = 35.9 bits (79), Expect = 0.023
Identities = 16/64 (25%), Positives = 31/64 (48%)
Frame = +1
Query: 283 TVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHPSDKLALT 462
T + +A + +G ++ G DG + V +I K+ H GQ + + PS+++ LT
Sbjct: 256 TASTMAVSLDGKYIALGGKDGDVSVAEVKTMEIYHYSKRLHLGQSIASLEFCPSERVMLT 315
Query: 463 IGGD 474
+
Sbjct: 316 TSSE 319
Score = 31.9 bits (69), Expect = 0.37
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 158 TASVRCISIAGKFLASGGTDDKVVILDMKT 247
TAS +S+ GK++A GG D V + ++KT
Sbjct: 256 TASTMAVSLDGKYIALGGKDGDVSVAEVKT 285
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 35.5 bits (78), Expect = 0.030
Identities = 22/87 (25%), Positives = 42/87 (48%)
Frame = +1
Query: 247 SKRHTVLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVD 426
+K +L H+G V A F +G + L+ D +I + + K +K +HG + V D
Sbjct: 8 TKEAHILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYK-SHGRE-VRD 65
Query: 427 ITIHPSDKLALTIGGDKTLRTWNLVKG 507
+ + + + GGD+ + W++ G
Sbjct: 66 VHVTSDNAKFCSCGGDRQVYYWDVSTG 92
Score = 34.3 bits (75), Expect = 0.069
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +1
Query: 304 TNNGTHLLSGSDDGSIIVTRTGNWQI--EKIWKKAHGGQPVV-DITIHPSDKLALTIGGD 474
TN+ H++ GS+DG + W + K+ K VV ++ HP + LT D
Sbjct: 237 TNSDAHVIGGSEDGLVFF-----WDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVD 291
Query: 475 KTLRTW 492
T+R W
Sbjct: 292 GTIRVW 297
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 397 KAHGGQPVVDITIHPSDKLALTIGGDKTLRTWNLVKGL 510
K H G V+ + ALT G D+T+R WN +G+
Sbjct: 15 KGHEGA-VLAARFNGDGNYALTCGKDRTIRLWNPHRGI 51
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/75 (24%), Positives = 39/75 (52%)
Frame = +1
Query: 274 HDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHPSDKL 453
HDG VNAV F ++ + ++S D S+ V + +E + V+ + + ++ +
Sbjct: 101 HDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSVVLTKTEII 160
Query: 454 ALTIGGDKTLRTWNL 498
++ G T+RT+++
Sbjct: 161 GGSVDG--TVRTFDM 173
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 35.5 bits (78), Expect = 0.030
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +1
Query: 265 LMNHDGTVNAVAFTNNGTHLLSGSDDGSIIV 357
L H+G VNAV F + G L+SGSDD I++
Sbjct: 51 LNGHEGCVNAVEFNSTGDVLVSGSDDRQIML 81
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 35.5 bits (78), Expect = 0.030
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +1
Query: 310 NGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHPSD--KLALTIGGDKTL 483
+G ++LSGS DG+ + + Q++ I K H + V + PS+ K+A T D T+
Sbjct: 349 DGEYVLSGSSDGNAYIWQVNKPQVDPIILKGHDFE-VTAVDWSPSEIGKVA-TASDDFTV 406
Query: 484 RTWNL 498
R WN+
Sbjct: 407 RLWNI 411
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 35.1 bits (77), Expect = 0.039
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Frame = +1
Query: 265 LMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWK----KAHGGQPVVDIT 432
L H VN + F+ +G L SG+D G + + + + + WK + + V+D+
Sbjct: 60 LTYHGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQ 119
Query: 433 IHPSDKLALTIGGDKTLRTWNLVKG 507
P D ++ D + W++ KG
Sbjct: 120 WSPDDAYLISGSVDNSCIIWDVNKG 144
Score = 31.9 bits (69), Expect = 0.37
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 403 HGGQPVVDITIHPSDKLALTIGGDKTLRTWNLVKG 507
H G+PV+ + HP L T G D ++ W + G
Sbjct: 11 HDGKPVLTVDFHPISGLLATAGADYDIKLWLINSG 45
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 35.1 bits (77), Expect = 0.039
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Frame = +1
Query: 265 LMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWK----KAHGGQPVVDIT 432
L H VN + F+ +G L SG+D G + + + + + WK + + V+D+
Sbjct: 60 LTYHGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQ 119
Query: 433 IHPSDKLALTIGGDKTLRTWNLVKG 507
P D ++ D + W++ KG
Sbjct: 120 WSPDDAYLISGSVDNSCIIWDVNKG 144
Score = 31.9 bits (69), Expect = 0.37
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 403 HGGQPVVDITIHPSDKLALTIGGDKTLRTWNLVKG 507
H G+PV+ + HP L T G D ++ W + G
Sbjct: 11 HDGKPVLTVDFHPISGLLATAGADYDIKLWLINSG 45
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 35.1 bits (77), Expect = 0.039
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Frame = +1
Query: 265 LMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGG--QPVVDITIH 438
L H G VN V+F +G LLSGSDD +I+ +WQ + G +
Sbjct: 51 LDKHKGCVNTVSFNADGDILLSGSDDRQVIL---WDWQTASVKLSFDSGHFNNIFQAKFM 107
Query: 439 P--SDKLALTIGGDKTLR 486
P D+ +T DK +R
Sbjct: 108 PFSDDRTIVTSAADKQVR 125
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 35.1 bits (77), Expect = 0.039
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Frame = +1
Query: 232 LRHEDSKRHTVLMN---HDGTVNAVAFTNNGTHLLSGSDDGSIIV-TRTGNWQIEKIWKK 399
+R D+++ T +N H G V A+ + G+ L SGS D II+ G + ++ +
Sbjct: 88 IRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRL--R 145
Query: 400 AHGGQPVVDITIHPSDKLALTIGGDKTLRTWNL 498
H Q V D+ K ++ DK LR W+L
Sbjct: 146 GHRDQ-VTDLVFLDGGKKLVSSSKDKFLRVWDL 177
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 33.5 bits (73), Expect = 0.12
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Frame = +1
Query: 274 HDGTVNAVAFTNNGTHLLSGSDDGSIIVTRT---GNWQIEKIWKKAHGGQPVVDITIHPS 444
H V++VA+ +NGT L SGS D + + G+ + + + K H V + P
Sbjct: 19 HKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGH-TDSVDQLCWDPK 77
Query: 445 -DKLALTIGGDKTLRTWNLVKG 507
L T GDK++R W+ G
Sbjct: 78 HSDLVATASGDKSVRLWDARSG 99
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 33.5 bits (73), Expect = 0.12
Identities = 22/82 (26%), Positives = 37/82 (45%)
Frame = +1
Query: 253 RHTVLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDIT 432
RH+ L H +N+V + +G L S S+D + T + E + + + G
Sbjct: 811 RHS-LQGHANPINSVCWDPSGDFLASVSEDMVKVWTLGTGSEGECVHELSCNGNKFQSCV 869
Query: 433 IHPSDKLALTIGGDKTLRTWNL 498
HP+ L IG ++L WN+
Sbjct: 870 FHPAYPSLLVIGCYQSLELWNM 891
Score = 27.9 bits (59), Expect = 6.0
Identities = 19/70 (27%), Positives = 29/70 (41%)
Frame = +1
Query: 286 VNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHPSDKLALTI 465
V F+++G L S D ++ T + K + H + DI PS T
Sbjct: 654 VTCCHFSSDGKMLASAGHDKKAVLWYTDTMK-PKTTLEEHTAM-ITDIRFSPSQLRLATS 711
Query: 466 GGDKTLRTWN 495
DKT+R W+
Sbjct: 712 SFDKTVRVWD 721
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 33.5 bits (73), Expect = 0.12
Identities = 26/92 (28%), Positives = 43/92 (46%)
Frame = +1
Query: 238 HEDSKRHTVLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQP 417
H + L H+G++ + ++ +G+ ++S SDD S + + ++ H +
Sbjct: 222 HYSASHMLRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVR- 280
Query: 418 VVDITIHPSDKLALTIGGDKTLRTWNLVKGLQ 513
V D I SD L +T G D T R W V G Q
Sbjct: 281 VWDCCI--SDSLIVTAGEDCTCRVWG-VDGTQ 309
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 33.5 bits (73), Expect = 0.12
Identities = 26/92 (28%), Positives = 43/92 (46%)
Frame = +1
Query: 238 HEDSKRHTVLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQP 417
H + L H+G++ + ++ +G+ ++S SDD S + + ++ H +
Sbjct: 222 HYSASHMLRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVR- 280
Query: 418 VVDITIHPSDKLALTIGGDKTLRTWNLVKGLQ 513
V D I SD L +T G D T R W V G Q
Sbjct: 281 VWDCCI--SDSLIVTAGEDCTCRVWG-VDGTQ 309
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 33.5 bits (73), Expect = 0.12
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +2
Query: 113 ETEKIIKQTFATHSHTASVRCISIAGKFLASGGTDDKVVI 232
E +K + H H +V C++ AG L SGG D + +
Sbjct: 362 ERQKYLTHKGTIHGHRMAVLCLATAGSLLLSGGADKNICV 401
Score = 27.5 bits (58), Expect = 7.9
Identities = 20/77 (25%), Positives = 32/77 (41%)
Frame = +1
Query: 262 VLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHP 441
VLM + V A+A + GS DG++ + K HG + V + +
Sbjct: 329 VLMKQENAVTALAVNLTDAVVYCGSSDGTVNFWERQKYLTHK--GTIHGHRMAV-LCLAT 385
Query: 442 SDKLALTIGGDKTLRTW 492
+ L L+ G DK + W
Sbjct: 386 AGSLLLSGGADKNICVW 402
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 33.5 bits (73), Expect = 0.12
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 65 VGTYEGFLSG-YSILSVETEKIIKQTFATHSHTASVRCISIAGKFLASGGTDDKVVI 232
+ Y G G + + +K++K H +V CI+ AGK L SG D K+ +
Sbjct: 234 MAVYSGSSDGAVNFWEMGDKKLLKHCEVFKKHRLAVLCIAAAGKLLFSGAADKKICV 290
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 33.1 bits (72), Expect = 0.16
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +1
Query: 262 VLMNHDGTVNAVAFTN-NGTHLLSGSDDGSIIV-TRTGNWQIEKIWKKAHGGQPVVDITI 435
+L H+ +NA+A + NG+ L SG DGSI+V R I + + V+ + +
Sbjct: 254 ILSEHNSGINALALSGTNGSLLHSGGSDGSILVWERDDGGDIVVVGMLRGHTESVLCLAV 313
Query: 436 HPSDKLALTIGGDKTLRTW 492
SD L + DKT+R W
Sbjct: 314 -VSDILC-SGSADKTVRLW 330
Score = 30.7 bits (66), Expect = 0.85
Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +1
Query: 202 IRWDR**SSYLRHEDSKRHTVLMN-HDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQ 378
+ WDR + R D K N HD +NAVA + NG + +GS D I V R N
Sbjct: 183 VSWDRTLKIW-RTTDFKCLESFTNAHDDAINAVALSENG-DIYTGSSDQRIKVWRK-NIN 239
Query: 379 IEKIWKKAHGGQPVVDITIHPSDKLALTIGG 471
E + KK V ++ H S AL + G
Sbjct: 240 EENV-KKKRKHSLVAILSEHNSGINALALSG 269
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 33.1 bits (72), Expect = 0.16
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +1
Query: 274 HDGTVNAVAFTNNGTHLLSGSDDGS--IIVTRTGNWQIEKIWKKAHG-GQPVVDITIHPS 444
H+G VN V F +G +GSDDG+ + RTG+ Q++ G PV I S
Sbjct: 247 HEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGH-QLQVYQPHGDGENGPVTSIAFSVS 305
Query: 445 DKLALT-IGGDKTLRTWNLVKG 507
+L + T W+ + G
Sbjct: 306 GRLLFAGYASNNTCYVWDTLLG 327
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 33.1 bits (72), Expect = 0.16
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +1
Query: 274 HDGTVNAVAFTNNGTHLLSGSDDGS--IIVTRTGNWQIEKIWKKAHG-GQPVVDITIHPS 444
H+G VN V F +G +GSDDG+ + RTG+ Q++ G PV I S
Sbjct: 185 HEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGH-QLQVYQPHGDGENGPVTSIAFSVS 243
Query: 445 DKLALT-IGGDKTLRTWNLVKG 507
+L + T W+ + G
Sbjct: 244 GRLLFAGYASNNTCYVWDTLLG 265
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 33.1 bits (72), Expect = 0.16
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +1
Query: 274 HDGTVNAVAFTNNGTHLLSGSDDGS--IIVTRTGNWQIEKIWKKAHG-GQPVVDITIHPS 444
H+G VN V F +G +GSDDG+ + RTG+ Q++ G PV I S
Sbjct: 247 HEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGH-QLQVYQPHGDGENGPVTSIAFSVS 305
Query: 445 DKLALT-IGGDKTLRTWNLVKG 507
+L + T W+ + G
Sbjct: 306 GRLLFAGYASNNTCYVWDTLLG 327
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 33.1 bits (72), Expect = 0.16
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +1
Query: 274 HDGTVNAVAFTNNGTHLLSGSDDGSIIV-TRTGNWQIEKIWKKAHGGQPVVDITIHPSDK 450
H ++ + FT +G ++SG D + V T + + K H G P+ + HP +
Sbjct: 141 HSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEF--KFHEG-PIRSLDFHPLEF 197
Query: 451 LALTIGGDKTLRTWNL 498
L T D+T++ W+L
Sbjct: 198 LLATGSADRTVKFWDL 213
Score = 27.5 bits (58), Expect = 7.9
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +2
Query: 44 LTMDEVVVGTYEGFLSGY-SILSVETEKIIKQTFATHSHTASVRCISIAGKFLASGGTDD 220
+ D V G SG + VE K+++ F H S G+FLASG +D
Sbjct: 64 VAFDSAEVLVLAGASSGVIKLWDVEEAKMVR-AFTGHRSNCSAVEFHPFGEFLASGSSDA 122
Query: 221 KVVILDMKTR 250
+ I D++ +
Sbjct: 123 NLKIWDIRKK 132
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 32.7 bits (71), Expect = 0.21
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 274 HDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKI 390
H G V+ V F G SGS+DG+I + +TG E+I
Sbjct: 269 HHGPVHCVRFAPTGESYASGSEDGTIRIWQTGPVNPEEI 307
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 32.3 bits (70), Expect = 0.28
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +1
Query: 259 TVLMNHD-GTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITI 435
T L+ D VN + F+N+G +L + + +I V + + + ++ T
Sbjct: 193 TFLVGGDTAEVNDIKFSNDGKSMLLTTTNNNIYVLDAYRGEKKCGFSLEPSQGTPIEATF 252
Query: 436 HPSDKLALTIGGDKTLRTWNL 498
P K L+ GD TL WN+
Sbjct: 253 TPDGKYVLSGSGDGTLHAWNI 273
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 32.3 bits (70), Expect = 0.28
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 101 ILSVETEKIIKQTFATHSHTASVRCISIAGKFLASGGTDDKVVILDMKTRK 253
IL K+ + HS + +S G++LA+GG D V I D++TR+
Sbjct: 205 ILKSHGMKLREPRNKNHSRESLALAVSSDGRYLATGGVDRHVHIWDVRTRE 255
>At5g14050.1 68418.m01644 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to unknown protein (ref|NP_057085.1)
Length = 546
Score = 31.9 bits (69), Expect = 0.37
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 259 TVLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIV 357
T+ MN G+V ++AF+ +G HLLS DG + V
Sbjct: 370 TLKMN--GSVRSLAFSEDGKHLLSSGGDGQVYV 400
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 31.9 bits (69), Expect = 0.37
Identities = 22/84 (26%), Positives = 35/84 (41%)
Frame = +1
Query: 262 VLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHP 441
+L H V + F GT + SGS D I + R + K H ++D+
Sbjct: 48 LLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNA-ILDLHWTS 106
Query: 442 SDKLALTIGGDKTLRTWNLVKGLQ 513
++ DKT+R W++ G Q
Sbjct: 107 DGSQIVSASPDKTVRAWDVETGKQ 130
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 31.9 bits (69), Expect = 0.37
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +1
Query: 274 HDGTVNAVAFTNNGTHLLSGSDDGSIIV-TRTGNWQIEKIWKKAHGGQPVVDITIHPSDK 450
H ++ + F+ +G ++SG D + V T + + K H G P+ + HP +
Sbjct: 90 HTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEF--KCHEG-PIRSLDFHPLEF 146
Query: 451 LALTIGGDKTLRTWNL 498
L T D+T++ W+L
Sbjct: 147 LLATGSADRTVKFWDL 162
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 31.5 bits (68), Expect = 0.48
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Frame = +1
Query: 223 SSYLRHEDSKRHTVLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKA 402
S+Y + K +T N + + NG +++SGS+D + + + Q I ++
Sbjct: 240 SNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYL---WDLQARNILQRL 296
Query: 403 HG-GQPVVDITIHPSDKLALTIGG--DKTLRTW 492
G V+ ++ HP + G DKT+R W
Sbjct: 297 EGHTDAVISVSCHPVQNEISSSGNHLDKTIRIW 329
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 31.5 bits (68), Expect = 0.48
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = +1
Query: 274 HDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQI--EKIWKKAHGGQPVVDITIHPSD 447
H VN V F +G+ ++ S D I+ +I E H G + ++ P
Sbjct: 186 HSNFVNCVRFAPDGSKFITVSSDKKGIIYDGKTCEILGELSSDDGHKGS-IYAVSWSPDG 244
Query: 448 KLALTIGGDKTLRTWNL 498
K LT+ DK+ + W++
Sbjct: 245 KQVLTVSADKSAKIWDI 261
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 31.5 bits (68), Expect = 0.48
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 274 HDGTVNAVAFTNNGTHLLSGSDDGSIIVTRT 366
H G V+ V FT G SGS+DG+I + +T
Sbjct: 269 HHGPVHCVRFTPTGLSYASGSEDGTIRIWQT 299
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 31.5 bits (68), Expect = 0.48
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 274 HDGTVNAVAFTNNGTHLLSGSDDGSIIVTRT 366
H G V+ V FT G SGS+DG+I + +T
Sbjct: 269 HHGPVHCVRFTPTGLSYASGSEDGTIRIWQT 299
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 31.1 bits (67), Expect = 0.64
Identities = 18/60 (30%), Positives = 33/60 (55%)
Frame = +1
Query: 319 HLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHPSDKLALTIGGDKTLRTWNL 498
H+L+G +DGSI++ N +I K H +PV+ +++ S ++ G D + +NL
Sbjct: 233 HVLAGYEDGSILLWDIRNAKIPLTSVKFH-SEPVLSLSVASSCDGGISGGADDKIVMYNL 291
Score = 29.5 bits (63), Expect = 2.0
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 418 VVDITIHPSDKLALTIGGDKTLRTWNLVK 504
V+D++ HPS L T D LR W+ ++
Sbjct: 20 VMDVSFHPSKSLLFTGSADGELRIWDTIQ 48
>At1g05670.1 68414.m00588 UDP-glucoronosyl/UDP-glucosyl transferase
family protein similar to UDP-glucose:salicylic acid
glucosyltransferase [Nicotiana tabacum] GI:7385017;
contains Pfam profiles PF00201: UDP-glucoronosyl and
UDP-glucosyl transferase, PF01535: PPR repeat
Length = 1184
Score = 31.1 bits (67), Expect = 0.64
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +1
Query: 469 GDKTLRTWNLVKGLQPLQ*TW--LVKVYCCQQKIKIFTRRYKN 591
G+K L W L KG+ P T+ LVK YC + +K T YK+
Sbjct: 1023 GEKLLN-WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKD 1064
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 30.7 bits (66), Expect = 0.85
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +1
Query: 247 SKRHTVLMNH--DGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPV 420
SK + V H G++N++AF+N+G HL + DG + + ++ K +G +
Sbjct: 291 SKSNPVARWHICQGSINSIAFSNDGAHLATVGRDGYLRIFDFLTQKLVCGGKSYYGA--L 348
Query: 421 VDITIHPSDKLALTIGGDKTLRTWNL 498
+ + K LT G D ++ W++
Sbjct: 349 LCCSWSMDGKYILTGGEDDLVQVWSM 374
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 179 SIAGKFLASGGTDDKVVILDMKTRK 253
S+ GK++ +GG DD V + M+ RK
Sbjct: 354 SMDGKYILTGGEDDLVQVWSMEDRK 378
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 30.7 bits (66), Expect = 0.85
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 274 HDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWK 396
H G V +++ ++G + SGS DGS+ + + K+W+
Sbjct: 422 HTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQ 462
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 274 HDGTVNAVAFTNNGTHLLSGSDDGSIIV 357
HDG + A+ F+N+G L S +DG + V
Sbjct: 220 HDGAILAMKFSNDGKFLASSGEDGIVRV 247
>At4g30510.2 68417.m04332 transport protein-related weak similarity
to Gsa12p [Pichia pastoris] GI:18307769; contains 1
WD-40 repeat (PF00400); similar to several hypothetical
proteins
Length = 261
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/37 (29%), Positives = 24/37 (64%)
Frame = +1
Query: 244 DSKRHTVLMNHDGTVNAVAFTNNGTHLLSGSDDGSII 354
D + H+ + H + A+A ++NG ++ +GS+ G++I
Sbjct: 128 DLQSHSEIDAHRSPLAAIALSSNGMYIATGSEQGTLI 164
>At4g30510.1 68417.m04331 transport protein-related weak similarity
to Gsa12p [Pichia pastoris] GI:18307769; contains 1
WD-40 repeat (PF00400); similar to several hypothetical
proteins
Length = 312
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/37 (29%), Positives = 24/37 (64%)
Frame = +1
Query: 244 DSKRHTVLMNHDGTVNAVAFTNNGTHLLSGSDDGSII 354
D + H+ + H + A+A ++NG ++ +GS+ G++I
Sbjct: 115 DLQSHSEIDAHRSPLAAIALSSNGMYIATGSEQGTLI 151
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +2
Query: 122 KIIKQTFATHSHTASVRCISIAGKFLASGGTDDKVVILDMKTRK 253
K + + H+ + +S G++LA+GG D V + D++TR+
Sbjct: 196 KFQESWYTRHNKQSLALAVSSDGRYLATGGVDCHVHLWDIRTRE 239
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 30.3 bits (65), Expect = 1.1
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Frame = +1
Query: 277 DGTVNAVAFTNNGTHLLSGSDDGSIIVTRT--GNW---QIEKIWK-KAHGGQPVVDITIH 438
D V ++ +GT +++ ++ G+ V R G + E + K +AH G ++ +
Sbjct: 162 DTAVRSLTVMWDGTMVVAANNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGH-ILKCLLS 220
Query: 439 PSDKLALTIGGDKTLRTWNL 498
P++K T DKT++ WN+
Sbjct: 221 PANKYLATASSDKTVKIWNV 240
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/76 (22%), Positives = 35/76 (46%)
Frame = +1
Query: 271 NHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHPSDK 450
+H V AV F + + SGS+DG++ + + + K+ V + +HP+
Sbjct: 76 SHTNNVMAVGFQCDAKWMYSGSEDGTV---KIWDLRAPGCQKEYESVAAVNTVVLHPNQT 132
Query: 451 LALTIGGDKTLRTWNL 498
++ + +R W+L
Sbjct: 133 ELISGDQNGNIRVWDL 148
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +1
Query: 289 NAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWK-KAHGGQPVVDITIHPSDKLALTI 465
N V F+N+G +L + DG I V + + + K G+ +D P ++
Sbjct: 209 NVVKFSNDGRLMLLTTMDGFIHVLDSFRGTLLSTFSVKPVAGESTLDAAFSPEGMFVVSG 268
Query: 466 GGDKTLRTWNLVKGLQ 513
GD + W + G Q
Sbjct: 269 SGDGSTHAWGVRSGKQ 284
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +1
Query: 289 NAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWK-KAHGGQPVVDITIHPSDKLALTI 465
N V F+N+G +L + DG I V + + + K G+ +D P ++
Sbjct: 206 NVVKFSNDGRLMLLTTMDGFIHVLDSFRGTLLSTFSVKPVAGESTLDAAFSPEGMFVVSG 265
Query: 466 GGDKTLRTWNLVKGLQ 513
GD + W + G Q
Sbjct: 266 SGDGSTHAWGVRSGKQ 281
>At3g62770.2 68416.m07051 transport protein-related weak similarity
to Gsa12p [Pichia pastoris] GI:18307769; contains 1
WD-40 repeat (PF00400); putative proteins - different
species
Length = 432
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 232 LRHEDSKRHTVLMNHDGTVNAVAFTNNGTHLLSGSDDGSII 354
+ H SKR +M HD + A T +G L + S G+++
Sbjct: 233 IEHYASKRTKFVMAHDSRIACFALTQDGHLLATASSKGTLV 273
>At3g62770.1 68416.m07052 transport protein-related weak similarity
to Gsa12p [Pichia pastoris] GI:18307769; contains 1
WD-40 repeat (PF00400); putative proteins - different
species
Length = 307
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 232 LRHEDSKRHTVLMNHDGTVNAVAFTNNGTHLLSGSDDGSII 354
+ H SKR +M HD + A T +G L + S G+++
Sbjct: 233 IEHYASKRTKFVMAHDSRIACFALTQDGHLLATASSKGTLV 273
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +1
Query: 331 GSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHPSDKLALTIGGDKTLRTWNLVK 504
G G++ + + + Q + + H G PV + HP+ L T G ++ ++ W+L K
Sbjct: 257 GHSGGTVTMWKPTS-QAPLVQMQCHPG-PVSSVAFHPNGHLMATSGKERKIKIWDLRK 312
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/61 (24%), Positives = 28/61 (45%)
Frame = +1
Query: 253 RHTVLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDIT 432
+H +G +N + + G L+S D G IIV ++ K + A G+ + +T
Sbjct: 1186 KHLASSESNGRINCLELSKCGEFLVSAGDQGQIIVRSMNTLEVVKRYNGA--GKIITSLT 1243
Query: 433 I 435
+
Sbjct: 1244 V 1244
>At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 29.1 bits (62), Expect = 2.6
Identities = 20/86 (23%), Positives = 41/86 (47%)
Frame = +1
Query: 241 EDSKRHTVLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPV 420
E+S++ + G +++F +GT L +G++DG++ V + + K H V
Sbjct: 130 EESEKVVKELKDVGQQLSLSFNQDGTVLATGAEDGTLRVFEWPSMKTLLNESKTHAS--V 187
Query: 421 VDITIHPSDKLALTIGGDKTLRTWNL 498
+T S K +++G R W++
Sbjct: 188 KSLTFSESGKFLVSLGA-PLCRVWDV 212
>At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 29.1 bits (62), Expect = 2.6
Identities = 20/86 (23%), Positives = 41/86 (47%)
Frame = +1
Query: 241 EDSKRHTVLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPV 420
E+S++ + G +++F +GT L +G++DG++ V + + K H V
Sbjct: 130 EESEKVVKELKDVGQQLSLSFNQDGTVLATGAEDGTLRVFEWPSMKTLLNESKTHAS--V 187
Query: 421 VDITIHPSDKLALTIGGDKTLRTWNL 498
+T S K +++G R W++
Sbjct: 188 KSLTFSESGKFLVSLGA-PLCRVWDV 212
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 29.1 bits (62), Expect = 2.6
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +2
Query: 92 GY-SILSVETEKIIKQTFATHSHTASVRCI--SIAGKFLASGGTDDKVVILDMKTRK 253
GY I T+K++ S+ ++ C S+ GK+L +GG DD V + M+ RK
Sbjct: 325 GYLRIFDFSTQKLV---CGVKSYYGALLCCAWSMDGKYLLTGGEDDLVQVWSMEDRK 378
Score = 28.7 bits (61), Expect = 3.4
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +1
Query: 247 SKRHTVLMNH--DGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPV 420
SK + V H G +N++AF+N+G +L + DG + + ++ K +G +
Sbjct: 291 SKSNPVARWHIGQGAINSIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGA--L 348
Query: 421 VDITIHPSDKLALTIGGDKTLRTWNL 498
+ K LT G D ++ W++
Sbjct: 349 LCCAWSMDGKYLLTGGEDDLVQVWSM 374
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/76 (22%), Positives = 30/76 (39%)
Frame = +1
Query: 280 GTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHPSDKLAL 459
G + VAF + G+ L +G DG ++ I K + + ++ L
Sbjct: 24 GVIKCVAFNHRGSLLAAGCADGGCVIWDFETRGIAKEIRDNDCSAAITSVSWSKYGHRLL 83
Query: 460 TIGGDKTLRTWNLVKG 507
DK+L W++ G
Sbjct: 84 VSAADKSLTLWDVSTG 99
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 28.7 bits (61), Expect = 3.4
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = +2
Query: 113 ETEKIIKQTFATHSHTASVRCISIAGKFLASGGTDDKVVI 232
E +K + H +V C++ AG + SGG D + +
Sbjct: 366 EGQKYLSHGGTLRGHRLAVLCLAAAGSLVLSGGADKNICV 405
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 28.7 bits (61), Expect = 3.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 274 HDGTVNAVAFTNNGTHLLSGSDDGSI 351
H G +NA+AF+ +G SG +DG +
Sbjct: 316 HFGPINALAFSPDGKSFSSGGEDGYV 341
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 28.7 bits (61), Expect = 3.4
Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Frame = +1
Query: 274 HDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWK-KAHGGQPVVDITIHPSDK 450
H G V A++F+ NG L + ++DG + W + K+ K+ + PS
Sbjct: 394 HTGEVTAISFSENGYFLATAAEDGVRL------WDLRKLRNFKSFLSADANSVEFDPSGS 447
Query: 451 -LALTIGGDKTLRT------WNLVKGLQPLQ*T 528
L + K +T WNL+K L L T
Sbjct: 448 YLGIAASDIKVYQTASVKAEWNLIKTLPDLSGT 480
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 28.7 bits (61), Expect = 3.4
Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Frame = +1
Query: 274 HDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWK-KAHGGQPVVDITIHPSDK 450
H G V A++F+ NG L + ++DG + W + K+ K+ + PS
Sbjct: 394 HTGEVTAISFSENGYFLATAAEDGVRL------WDLRKLRNFKSFLSADANSVEFDPSGS 447
Query: 451 -LALTIGGDKTLRT------WNLVKGLQPLQ*T 528
L + K +T WNL+K L L T
Sbjct: 448 YLGIAASDIKVYQTASVKAEWNLIKTLPDLSGT 480
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 274 HDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNW-QIEKIWKKAHGGQPVVDITIHPSDK 450
H + +V F+++G LLS S DGS+ V + K+++ P ++ P ++
Sbjct: 372 HTDDITSVKFSSDGRILLSRSFDGSLKVWDLRQMKEALKVFEGLPNYYPQTNVAFSPDEQ 431
Query: 451 LALT 462
+ LT
Sbjct: 432 IILT 435
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 28.7 bits (61), Expect = 3.4
Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +1
Query: 256 HTVLMNHDGTVNAVAFTNNGTHLLS-GSDDGSIIVTRTGNWQIEKIWKKAHG-GQPVVDI 429
H + +V + F + + +L+ G+ DGS+ V + + K+ G + V D
Sbjct: 165 HCIFDQCKSSVTVLKFGHMSSDILAYGASDGSLTVCSL--LEEPSVLKQLTGHSKDVTDF 222
Query: 430 TIHPSDKLALTIGGDKTLRTWNLVKGL 510
+++ + DKT+R W L +G+
Sbjct: 223 DFSSNNQYIASSSLDKTIRVWELSRGV 249
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 28.7 bits (61), Expect = 3.4
Identities = 23/80 (28%), Positives = 33/80 (41%)
Frame = +1
Query: 268 MNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHPSD 447
M HD V + F+ + L SGS DG I + R + + AH Q V ++
Sbjct: 260 MMHDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRF-DAH-SQGVTSLSFSRDG 317
Query: 448 KLALTIGGDKTLRTWNLVKG 507
L+ D+T R L G
Sbjct: 318 SQLLSTSFDQTARIHGLKSG 337
>At1g08190.1 68414.m00905 vacuolar assembly protein, putative
(VPS41) 99.8% identical to Vacuolar assembly protein
VPS41 homolog (SP:P93043) [Arabidopsis thaliana];
similar to vacuolar assembly protein vps41 GI:1835787
from [Lycopersicon esculentum]
Length = 980
Score = 28.7 bits (61), Expect = 3.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 274 HDGTVNAVAFTNNGTHLLSGSDDGSIIV 357
H VN + F G ++ S SDDGS+++
Sbjct: 97 HTAPVNDINFDTEGEYIGSCSDDGSVVI 124
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 28.3 bits (60), Expect = 4.5
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 322 LLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVD-ITIHPSDKLALTIGGDKTLRTWNL 498
L+SGSDD ++ + + K K+ G Q +V+ + P K + DK++R WN
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQPK--KRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNG 389
Query: 499 VKG 507
+ G
Sbjct: 390 ITG 392
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +1
Query: 259 TVLMNHDGTVNAVAFT---NNGTHLLSGSDDGS 348
+VL H G V A+AF+ + LLS SDDG+
Sbjct: 323 SVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDGT 355
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +1
Query: 235 RHEDSKRHTVLMNHDGTVNAVAFTNNGT---HLLSGSDDGS 348
R D +VL H G V A+AF+ LLS SDDG+
Sbjct: 375 RLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGT 415
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 274 HDGTVNAVAFTNNGTHLLSGSDDGSI 351
H G +NA+AF +G SG +DG +
Sbjct: 289 HFGPINALAFNPDGKSFSSGGEDGYV 314
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 274 HDGTVNAVAFTNNGTHLLSGSDDGSI 351
H G +NA+AF +G SG +DG +
Sbjct: 289 HFGPINALAFNPDGKSFSSGGEDGYV 314
>At1g27470.1 68414.m03349 transducin-related / WD-40 repeat
protein-related contains 6 WD-40 repeats (PF00400) (2
weak); related to KIAA1988 protein (GI:18916910) [Homo
sapiens]
Length = 810
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = +1
Query: 244 DSKRHTVLM---NHDGTVNAVAFTNNGTHLLSGSDDGSIIV 357
DS+ T+L NH G VNA+A + + + S DG +I+
Sbjct: 275 DSQHGTLLQAHSNHKGDVNALAASPSHNRVFSAGADGQVIL 315
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 27.9 bits (59), Expect = 6.0
Identities = 22/86 (25%), Positives = 37/86 (43%)
Frame = +1
Query: 262 VLMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHP 441
VL +H V F+ L + S D + + +T ++ + H + + + HP
Sbjct: 293 VLKDHKERATDVVFSPVDDCLATASADRTAKLWKTDGTLLQTF--EGHLDR-LARVAFHP 349
Query: 442 SDKLALTIGGDKTLRTWNLVKGLQPL 519
S K T DKT R W++ G + L
Sbjct: 350 SGKYLGTTSYDKTWRLWDINTGAELL 375
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/78 (23%), Positives = 35/78 (44%)
Frame = +1
Query: 274 HDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHPSDKL 453
H TV + A++ +G L + S DG+ + + + E I V ++ + S
Sbjct: 73 HTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSC 132
Query: 454 ALTIGGDKTLRTWNLVKG 507
T DK++ W +++G
Sbjct: 133 LATCSRDKSVWIWEVLEG 150
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 27.5 bits (58), Expect = 7.9
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Frame = +1
Query: 319 HLLSGSDDGSIIV------TRTGNWQIEKIWKKAHGGQPVVDITIH-PSDKLALTIGGDK 477
HLLSGSDD I + + + ++I+ KAH G V D+ H + L ++G D+
Sbjct: 193 HLLSGSDDAQICLWDINATPKNKSLDAQQIF-KAHEG-VVEDVAWHLRHEYLFGSVGDDQ 250
Query: 478 TLRTWNL 498
L W+L
Sbjct: 251 YLLIWDL 257
>At5g11240.1 68418.m01313 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to uncharacterized protein KIAA0007 (GI:1663708)
{Homo sapiens} 1.2e-11
Length = 615
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 244 DSKRHTVLMNHDGTVNAVAFTNNGTHLLSGS 336
D K+ H G V VAFT +G ++LS +
Sbjct: 187 DLKKIQKFTGHPGVVRCVAFTEDGKYVLSSA 217
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/77 (20%), Positives = 34/77 (44%)
Frame = +1
Query: 265 LMNHDGTVNAVAFTNNGTHLLSGSDDGSIIVTRTGNWQIEKIWKKAHGGQPVVDITIHPS 444
L H V V +++G LSGS DG + + + + + + V+ +
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTR--RFVGHTKDVLSVAFSTD 116
Query: 445 DKLALTIGGDKTLRTWN 495
++ ++ D+T++ WN
Sbjct: 117 NRQIVSASRDRTIKLWN 133
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,925,169
Number of Sequences: 28952
Number of extensions: 290071
Number of successful extensions: 965
Number of sequences better than 10.0: 96
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 949
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1305036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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