Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20114
         (440 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    26   0.18 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   2.2  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   3.9  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   3.9  
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    20   9.1  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    20   9.1  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    20   9.1  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    20   9.1  

>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 25.8 bits (54), Expect = 0.18
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 7/37 (18%)
 Frame = -2

Query: 202 STPQAKKSWTAC----SACW---VGSFSLKSPMKPIP 113
           S P A    +AC    S+CW   +GSFSL   ++P+P
Sbjct: 22  SGPNATLQSSACTDDLSSCWSEDMGSFSLPLDLEPLP 58


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +3

Query: 198 VENNLLTEDYHVVGHQQLITR*VLELYCNQKSKV 299
           V+ N   E ++ + HQQ+I R  +E  CN   +V
Sbjct: 223 VDKNRRGEIFYYM-HQQIIARFNIERLCNGLKRV 255


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -3

Query: 114 LWIYYCSAMCEHRYGSNPLLHK 49
           L +Y C++ CE    +  +LH+
Sbjct: 305 LLVYACASTCEQANDTPSILHE 326


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -3

Query: 114 LWIYYCSAMCEHRYGSNPLLHK 49
           L +Y C++ CE    +  +LH+
Sbjct: 305 LLVYACASTCEQANDTPSILHE 326


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
          protein.
          Length = 74

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +2

Query: 59 SGLEPYRCSH 88
          +G  PYRC H
Sbjct: 33 TGERPYRCEH 42


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 240 HQQLITR*VLELYCNQ 287
           HQQ+I R   E  CN+
Sbjct: 236 HQQIIARYNFERLCNK 251


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 6/24 (25%), Positives = 12/24 (50%)
 Frame = -3

Query: 123 NRSLWIYYCSAMCEHRYGSNPLLH 52
           N   W+++C  +     G N ++H
Sbjct: 663 NPGYWLFHCHFLFHIVIGMNLIIH 686


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +2

Query: 59  SGLEPYRCSH 88
           +G  PYRC H
Sbjct: 186 TGERPYRCEH 195


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,429
Number of Sequences: 336
Number of extensions: 2255
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9880622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)