Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20114
         (440 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   2.6  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   2.6  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   2.6  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    21   6.0  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   6.0  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   6.0  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        21   7.9  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 152 RQLLPKVANETDPYGYIIVV 93
           R LLPK   E  PY  ++VV
Sbjct: 601 RLLLPKGKKEGMPYNVLVVV 620


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -1

Query: 62  RSFINFSVASSHE*IAQVLE 3
           RSF+ FS+  S + +A+V++
Sbjct: 296 RSFVPFSIERSSQSVAEVMD 315


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 152 RQLLPKVANETDPYGYIIVV 93
           R LLPK   E  PY  ++VV
Sbjct: 601 RLLLPKGKKEGMPYNVLVVV 620


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +2

Query: 341 YFIYTTNRSSITIIGLY 391
           YF+YT+   +  + G+Y
Sbjct: 79  YFLYTSKNDNEEVCGIY 95


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 17/48 (35%), Positives = 20/48 (41%)
 Frame = +2

Query: 128 WRL*GEAADPAGTAGGPRLFSLWG*K*LID*RLPRRWSPAVDNTLSPG 271
           W    E  DPAG   GP  + L   K     R P +W    DN+ S G
Sbjct: 395 WFTYQETVDPAGCNAGPAKYYL---KSRDPERTPYQW----DNSTSAG 435


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 57  LHKFFRCLQPRMNSPS 10
           LH++ +   PRM +PS
Sbjct: 103 LHEYLKFSYPRMRAPS 118


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/34 (23%), Positives = 18/34 (52%)
 Frame = -3

Query: 294 SISDCSTAPGLSVLSTAGDQRRGSLQSISYFQPH 193
           +I  C+T+P  + L ++      +  +++Y Q H
Sbjct: 26  TIQACTTSPATASLESSLSAAAVAAAAVNYAQQH 59


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,754
Number of Sequences: 438
Number of extensions: 2761
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11450997
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)