Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20113
         (627 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    26   0.30 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.8  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   2.8  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   2.8  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    23   2.8  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +1

Query: 196  NQGKGSIIQNVVNNLIIDGSGTPWSTATSCGSATDSTLSESTSPITLD 339
            NQG+  + Q   N L  +     W   T C     ST++ ST+P+  D
Sbjct: 2256 NQGQLQL-QVCPNGLFWNKDHCDWPENTECHPDASSTMAPSTTPMVPD 2302



 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +1

Query: 265  WSTATSCGSATDSTLSESTSPITLDSSWP 351
            W+T T+  + T    + ST+     ++WP
Sbjct: 1052 WTTTTTRRTTTTRPTTTSTTTRPTTTNWP 1080


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/19 (52%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
 Frame = -1

Query: 579 VLQSVVELSF-KYWLYLVL 526
           ++  V+ +SF  YWLYLVL
Sbjct: 47  IILQVLFVSFVSYWLYLVL 65


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 13/45 (28%), Positives = 18/45 (40%)
 Frame = +3

Query: 327 YNFRLIMAGNFVKLIYRNYNLALKLGPTLDPANERLAYGDGKEKN 461
           Y   L      V L +  YNL+L +    D  N      + +EKN
Sbjct: 169 YTLHLFCVLYVVLLHFLTYNLSLGIKLRYDDVNNLFRIEESEEKN 213


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 13/45 (28%), Positives = 18/45 (40%)
 Frame = +3

Query: 327 YNFRLIMAGNFVKLIYRNYNLALKLGPTLDPANERLAYGDGKEKN 461
           Y   L      V L +  YNL+L +    D  N      + +EKN
Sbjct: 169 YTLHLFCVLYVVLLHFLTYNLSLGIKLRYDDVNNLFRIEESEEKN 213


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/19 (52%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
 Frame = -1

Query: 579 VLQSVVELSF-KYWLYLVL 526
           ++  V+ +SF  YWLYLVL
Sbjct: 65  IILQVLFVSFVSYWLYLVL 83


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,790
Number of Sequences: 336
Number of extensions: 2892
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16083914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)