Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20112
         (629 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165...    97   8e-21
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558...    97   8e-21
03_06_0138 + 31940606-31940708,31940792-31940897,31941739-319418...    91   7e-19
01_01_0330 - 2681019-2683988                                           28   7.0  
01_01_0328 - 2664412-2664535,2665388-2665465,2667784-2667895,266...    28   7.0  

>04_04_1015 -
           30115377-30115477,30115570-30115615,30116491-30116590,
           30116676-30116771,30119519-30119556,30119623-30119733,
           30119820-30119951,30120024-30120263,30120532-30120700,
           30120994-30121493,30121581-30121691,30121802-30122133,
           30122603-30122737,30122839-30122988,30123809-30123947
          Length = 799

 Score = 97.5 bits (232), Expect = 8e-21
 Identities = 41/75 (54%), Positives = 59/75 (78%)
 Frame = +1

Query: 283 DKVPVLRVEYNPTVPHCSLATLIGLCIRIKILRSIHHPVKLDIFIKKGAHTTEDEINKQI 462
           D++  +RV + PTV  CS+AT+IGLC+R+K++RS+    K+DI +  G+H TE  +NKQ+
Sbjct: 712 DELSHVRVTFTPTVERCSMATVIGLCLRVKLMRSLPPRYKVDIRVAPGSHATETAVNKQL 771

Query: 463 NDKERIAAAMENPNL 507
           NDKER+AAA+ENPNL
Sbjct: 772 NDKERVAAALENPNL 786


>04_04_1008 -
           30054674-30054774,30054867-30054912,30055788-30055887,
           30055973-30056068,30058816-30058853,30058920-30059030,
           30059117-30059248,30059321-30059560,30059829-30059997,
           30060291-30060790,30060878-30060988,30061099-30061430,
           30061900-30062034,30062136-30062285,30063106-30063244
          Length = 799

 Score = 97.5 bits (232), Expect = 8e-21
 Identities = 41/75 (54%), Positives = 59/75 (78%)
 Frame = +1

Query: 283 DKVPVLRVEYNPTVPHCSLATLIGLCIRIKILRSIHHPVKLDIFIKKGAHTTEDEINKQI 462
           D++  +RV + PTV  CS+AT+IGLC+R+K++RS+    K+DI +  G+H TE  +NKQ+
Sbjct: 712 DELSHVRVTFTPTVERCSMATVIGLCLRVKLMRSLPPRYKVDIRVAPGSHATETAVNKQL 771

Query: 463 NDKERIAAAMENPNL 507
           NDKER+AAA+ENPNL
Sbjct: 772 NDKERVAAALENPNL 786


>03_06_0138 +
           31940606-31940708,31940792-31940897,31941739-31941838,
           31942913-31942958,31943580-31943689
          Length = 154

 Score = 91.1 bits (216), Expect = 7e-19
 Identities = 36/76 (47%), Positives = 59/76 (77%)
 Frame = +1

Query: 283 DKVPVLRVEYNPTVPHCSLATLIGLCIRIKILRSIHHPVKLDIFIKKGAHTTEDEINKQI 462
           +K+  +++ + PTV HCS+AT+IGLC+R+K++++     K+DI +  G+   E+ +NKQ+
Sbjct: 64  EKLGRIQITFTPTVQHCSMATVIGLCLRLKLMQNFPPHFKIDIKVAPGSLANEESVNKQL 123

Query: 463 NDKERIAAAMENPNLK 510
           NDKER+AAA+ENPNL+
Sbjct: 124 NDKERVAAALENPNLR 139



 Score = 32.3 bits (70), Expect = 0.33
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = +2

Query: 179 IYDYLRTIRDPEKPNTLEDLKVVYEE 256
           ++D +R I+DPE P +LE L V+ EE
Sbjct: 33  VFDTVRDIKDPEHPYSLEQLSVLSEE 58


>01_01_0330 - 2681019-2683988
          Length = 989

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
 Frame = +1

Query: 370 KILRSIHHPVKLDIFIKKGAHTTEDEI---NKQINDKERIAAAMENPNLKTWWK 522
           K+ + I   V + + +K+G  + +  +   N    D E  A AME+P + +WWK
Sbjct: 15  KLGQLIEDEVIMTLSVKRGIESLKKNLEFFNAVHEDAE--ALAMEDPGIDSWWK 66


>01_01_0328 -
           2664412-2664535,2665388-2665465,2667784-2667895,
           2668344-2668410,2668473-2668562,2668672-2668787,
           2668999-2671924
          Length = 1170

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
 Frame = +1

Query: 370 KILRSIHHPVKLDIFIKKGAHTTEDEI---NKQINDKERIAAAMENPNLKTWWK 522
           K+ + I   V + + +K+G  + +  +   N    D E  A AME+P + +WWK
Sbjct: 15  KLGQLIEDEVIMTLSVKRGIESLKKNLEFFNAVREDAE--ALAMEDPGIDSWWK 66


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,572,585
Number of Sequences: 37544
Number of extensions: 340910
Number of successful extensions: 828
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 828
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1537558360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)