Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20112
         (629 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    25   2.6  
U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.         23   6.1  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   6.1  
AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.     23   6.1  
AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.     23   6.1  
AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     23   6.1  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   8.0  

>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -2

Query: 301 VKRALYLQLVPSQRFLLVHDLQVFKRIW-LFGVSN 200
           V+  L+L L P      +H+L V + IW +FG+S+
Sbjct: 112 VQMCLHLYLSPDVVQANIHNLCVLRVIWRVFGISS 146


>U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.
          Length = 692

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +1

Query: 370 KILRSIHHPVKLDIFIKKGAHTTEDEINKQINDKERIA 483
           ++LR+IH P+K D +I        DE   + ND  ++A
Sbjct: 44  EVLRNIHLPLKYDEYIPYTKTWVSDE--TKYNDFAQVA 79


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 360  HSY*NIKVYPSSCEIGHFYQERGTYD 437
            H Y +  VYP + E  H++Q    YD
Sbjct: 1289 HDYWSALVYPFASETYHYHQFNLYYD 1314


>AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +1

Query: 370 KILRSIHHPVKLDIFIKKGAHTTEDEINKQINDKERIA 483
           ++LR+IH P+K D +I        DE   + ND  ++A
Sbjct: 44  EVLRNIHLPLKYDEYIPYTKTWVSDE--TKYNDFAQVA 79


>AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +1

Query: 370 KILRSIHHPVKLDIFIKKGAHTTEDEINKQINDKERIA 483
           ++LR+IH P+K D +I        DE   + ND  ++A
Sbjct: 44  EVLRNIHLPLKYDEYIPYTKTWVSDE--TKYNDFAQVA 79


>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +1

Query: 370 KILRSIHHPVKLDIFIKKGAHTTEDEINKQINDKERIA 483
           ++LR+IH P+K D +I        DE   + ND  ++A
Sbjct: 44  EVLRNIHLPLKYDEYIPYTKTWVSDE--TKYNDFAQVA 79


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
 Frame = -1

Query: 329 WGTV--GLYSTRKTGTLSAVGSFTKIPPRTRPSSLQAYLAFRGLELSSNSHIL 177
           WG+   GL + +  G +  +  +   PP   P   +  L    LE SS+SH++
Sbjct: 70  WGSTVPGLVAAKVAG-IDFISVYA--PPSLSPQEYERLLEAVELEASSHSHVV 119


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,765
Number of Sequences: 2352
Number of extensions: 12799
Number of successful extensions: 17
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61468785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)