Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20112
         (629 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC008865-1|AAH08865.1|  160|Homo sapiens family with sequence si...   108   2e-23
AK026528-1|BAB15496.1|  160|Homo sapiens protein ( Homo sapiens ...   108   2e-23
BC005023-1|AAH05023.1|  163|Homo sapiens family with sequence si...    91   3e-18
BC001733-1|AAH01733.1|  163|Homo sapiens family with sequence si...    91   3e-18
AF151886-1|AAD34123.1|  163|Homo sapiens CGI-128 protein protein.      91   3e-18

>BC008865-1|AAH08865.1|  160|Homo sapiens family with sequence
           similarity 96, member A protein.
          Length = 160

 Score =  108 bits (259), Expect = 2e-23
 Identities = 52/101 (51%), Positives = 71/101 (70%)
 Frame = +1

Query: 208 PRKAKYA*RLEGRVRGGIFVKEPTADKVPVLRVEYNPTVPHCSLATLIGLCIRIKILRSI 387
           P K      LE      + V+E   ++  V+ + + PTVPHCSLATLIGLC+R+K+ R +
Sbjct: 50  PEKPNTLEELEVVSESCVEVQEINEEEYLVI-IRFTPTVPHCSLATLIGLCLRVKLQRCL 108

Query: 388 HHPVKLDIFIKKGAHTTEDEINKQINDKERIAAAMENPNLK 510
               KL+I+I +G H+TE++INKQINDKER+AAAMENPNL+
Sbjct: 109 PFKHKLEIYISEGTHSTEEDINKQINDKERVAAAMENPNLR 149



 Score = 46.0 bits (104), Expect = 1e-04
 Identities = 19/25 (76%), Positives = 23/25 (92%)
 Frame = +2

Query: 179 IYDYLRTIRDPEKPNTLEDLKVVYE 253
           +YD +RTIRDPEKPNTLE+L+VV E
Sbjct: 40  VYDLIRTIRDPEKPNTLEELEVVSE 64


>AK026528-1|BAB15496.1|  160|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22875 fis, clone KAT02879. ).
          Length = 160

 Score =  108 bits (259), Expect = 2e-23
 Identities = 52/101 (51%), Positives = 71/101 (70%)
 Frame = +1

Query: 208 PRKAKYA*RLEGRVRGGIFVKEPTADKVPVLRVEYNPTVPHCSLATLIGLCIRIKILRSI 387
           P K      LE      + V+E   ++  V+ + + PTVPHCSLATLIGLC+R+K+ R +
Sbjct: 50  PEKPNTLEELEVVSESCVEVQEINEEEYLVI-IRFTPTVPHCSLATLIGLCLRVKLQRCL 108

Query: 388 HHPVKLDIFIKKGAHTTEDEINKQINDKERIAAAMENPNLK 510
               KL+I+I +G H+TE++INKQINDKER+AAAMENPNL+
Sbjct: 109 PFKHKLEIYISEGTHSTEEDINKQINDKERVAAAMENPNLR 149



 Score = 46.0 bits (104), Expect = 1e-04
 Identities = 19/25 (76%), Positives = 23/25 (92%)
 Frame = +2

Query: 179 IYDYLRTIRDPEKPNTLEDLKVVYE 253
           +YD +RTIRDPEKPNTLE+L+VV E
Sbjct: 40  VYDLIRTIRDPEKPNTLEELEVVSE 64


>BC005023-1|AAH05023.1|  163|Homo sapiens family with sequence
           similarity 96, member B protein.
          Length = 163

 Score = 91.1 bits (216), Expect = 3e-18
 Identities = 39/81 (48%), Positives = 57/81 (70%)
 Frame = +1

Query: 265 VKEPTADKVPVLRVEYNPTVPHCSLATLIGLCIRIKILRSIHHPVKLDIFIKKGAHTTED 444
           V+   +D    + V + PT+PHCS+ATLIGL I++K+LRS+    K+D+ I  G H +E 
Sbjct: 71  VRVQVSDPESTVAVAFTPTIPHCSMATLIGLSIKVKLLRSLPQRFKMDVHITPGTHASEH 130

Query: 445 EINKQINDKERIAAAMENPNL 507
            +NKQ+ DKER+AAA+EN +L
Sbjct: 131 AVNKQLADKERVAAALENTHL 151



 Score = 34.7 bits (76), Expect = 0.27
 Identities = 17/31 (54%), Positives = 22/31 (70%)
 Frame = +2

Query: 155 DENELRETIYDYLRTIRDPEKPNTLEDLKVV 247
           D  + RE I+D +R+I DPE P TLE+L VV
Sbjct: 39  DSIDARE-IFDLIRSINDPEHPLTLEELNVV 68


>BC001733-1|AAH01733.1|  163|Homo sapiens family with sequence
           similarity 96, member B protein.
          Length = 163

 Score = 91.1 bits (216), Expect = 3e-18
 Identities = 39/81 (48%), Positives = 57/81 (70%)
 Frame = +1

Query: 265 VKEPTADKVPVLRVEYNPTVPHCSLATLIGLCIRIKILRSIHHPVKLDIFIKKGAHTTED 444
           V+   +D    + V + PT+PHCS+ATLIGL I++K+LRS+    K+D+ I  G H +E 
Sbjct: 71  VRVQVSDPESTVAVAFTPTIPHCSMATLIGLSIKVKLLRSLPQRFKMDVHITPGTHASEH 130

Query: 445 EINKQINDKERIAAAMENPNL 507
            +NKQ+ DKER+AAA+EN +L
Sbjct: 131 AVNKQLADKERVAAALENTHL 151



 Score = 34.7 bits (76), Expect = 0.27
 Identities = 17/31 (54%), Positives = 22/31 (70%)
 Frame = +2

Query: 155 DENELRETIYDYLRTIRDPEKPNTLEDLKVV 247
           D  + RE I+D +R+I DPE P TLE+L VV
Sbjct: 39  DSIDARE-IFDLIRSINDPEHPLTLEELNVV 68


>AF151886-1|AAD34123.1|  163|Homo sapiens CGI-128 protein protein.
          Length = 163

 Score = 91.1 bits (216), Expect = 3e-18
 Identities = 39/81 (48%), Positives = 57/81 (70%)
 Frame = +1

Query: 265 VKEPTADKVPVLRVEYNPTVPHCSLATLIGLCIRIKILRSIHHPVKLDIFIKKGAHTTED 444
           V+   +D    + V + PT+PHCS+ATLIGL I++K+LRS+    K+D+ I  G H +E 
Sbjct: 71  VRVQVSDPESTVAVAFTPTIPHCSMATLIGLSIKVKLLRSLPQRFKMDVHITPGTHASEH 130

Query: 445 EINKQINDKERIAAAMENPNL 507
            +NKQ+ DKER+AAA+EN +L
Sbjct: 131 AVNKQLADKERVAAALENTHL 151



 Score = 34.7 bits (76), Expect = 0.27
 Identities = 17/31 (54%), Positives = 22/31 (70%)
 Frame = +2

Query: 155 DENELRETIYDYLRTIRDPEKPNTLEDLKVV 247
           D  + RE I+D +R+I DPE P TLE+L VV
Sbjct: 39  DSIDARE-IFDLIRSINDPEHPLTLEELNVV 68


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,685,037
Number of Sequences: 237096
Number of extensions: 1930478
Number of successful extensions: 3947
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3947
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)