Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20110
         (575 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    24   1.1  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   1.4  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    22   4.3  
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    21   7.5  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   9.9  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   9.9  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   9.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.9  

>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
          protein 7 protein.
          Length = 127

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 28 ALVLCGLLAAVSAAPQYY 81
          A++LC  L AVSAA   Y
Sbjct: 6  AVILCAFLVAVSAAENKY 23


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 387 NLPWDVNSEGSWV 425
           N  WDV+S GSW+
Sbjct: 187 NAWWDVHSTGSWL 199


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +1

Query: 22  MIALVLCGLLAAVSAAPQYYHGSSHWPYHHYD 117
           MI L+    + AVSAAP  ++ S    Y H D
Sbjct: 1   MIPLIAIAGILAVSAAPAEFYESR---YDHLD 29


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +1

Query: 184 EMQHLDNMMKELSLKFPSI 240
           EM++L+ ++KE    +PS+
Sbjct: 43  EMKYLEMVLKEAQRLYPSV 61


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 150 GHTFALVQPCQRN 188
           GHTF L  P Q +
Sbjct: 261 GHTFQLADPAQHD 273


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 185 SLARLDQSECVSNMLSRT*GLK 120
           S+ RLDQ +C   ++    GLK
Sbjct: 8   SVFRLDQDQCSHRIVREHLGLK 29


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 185 SLARLDQSECVSNMLSRT*GLK 120
           S+ RLDQ +C   ++    GLK
Sbjct: 322 SVFRLDQDQCSHRIVREHLGLK 343


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 185 SLARLDQSECVSNMLSRT*GLK 120
           S+ RLDQ +C   ++    GLK
Sbjct: 555 SVFRLDQDQCSHRIVREHLGLK 576


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 185 SLARLDQSECVSNMLSRT*GLK 120
           S+ RLDQ +C   ++    GLK
Sbjct: 555 SVFRLDQDQCSHRIVREHLGLK 576


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,981
Number of Sequences: 336
Number of extensions: 2788
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)