Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20110
         (575 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74046-1|CAA98556.2|  178|Caenorhabditis elegans Hypothetical pr...    33   0.15 
U64847-4|AAB04873.1|  492|Caenorhabditis elegans Cytochrome p450...    32   0.34 
U23484-5|AAK93844.1|  590|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AF077539-3|AAC26291.1|  310|Caenorhabditis elegans Hypothetical ...    28   5.5  
AL132876-21|CAD21671.1|  418|Caenorhabditis elegans Hypothetical...    27   7.2  
AL032634-1|CAC35856.2| 1195|Caenorhabditis elegans Hypothetical ...    27   7.2  
AF024491-2|AAT92081.1|  765|Caenorhabditis elegans Hypothetical ...    27   9.5  
AF024491-1|AAB70312.2|  850|Caenorhabditis elegans Hypothetical ...    27   9.5  

>Z74046-1|CAA98556.2|  178|Caenorhabditis elegans Hypothetical
           protein ZC116.1 protein.
          Length = 178

 Score = 33.1 bits (72), Expect = 0.15
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +1

Query: 31  LVLCGLLAAVSAAPQYYHGSSHWPYHHYDP 120
           L LC LLA  SA   YY  S + PY++Y P
Sbjct: 5   LALCSLLAVASAQYLYYPTSYYTPYYYYYP 34


>U64847-4|AAB04873.1|  492|Caenorhabditis elegans Cytochrome p450
           family protein 14A5 protein.
          Length = 492

 Score = 31.9 bits (69), Expect = 0.34
 Identities = 16/35 (45%), Positives = 17/35 (48%)
 Frame = -3

Query: 471 AFASAGR*FSTRLSRKPSCLRNSHPREGSVFSSND 367
           AF + G  F  R  R P  L   HP  G VFSS D
Sbjct: 82  AFVTQGDAFVNRAQRLPEILFQPHPNTGVVFSSGD 116


>U23484-5|AAK93844.1|  590|Caenorhabditis elegans Hypothetical
           protein EEED8.16 protein.
          Length = 590

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = -1

Query: 284 NRYLILVAF--HRPSFIMLGNFNDSSFIMLSKCCISLARLDQSECVSN 147
           N+Y++++ F  H  +      FN+  F  L   C +L  +D+ EC ++
Sbjct: 196 NQYMLIIKFKEHNDAVTFYEEFNNCPFNDLESYCCTLFFVDRIECTTS 243


>AF077539-3|AAC26291.1|  310|Caenorhabditis elegans Hypothetical
           protein T25D3.2 protein.
          Length = 310

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
 Frame = +3

Query: 156 TFALVQPCQRNATLGQHDEGAVVEVPQHYKRR---TVEGDKYQISIHLP 293
           T+   +  QRN  + ++ E  V  +P+HYK R   T+  DK  +    P
Sbjct: 21  TWDKAERIQRNEEIFKNSESVVHRLPEHYKTRYWETILSDKTPVHYRPP 69


>AL132876-21|CAD21671.1|  418|Caenorhabditis elegans Hypothetical
           protein Y105E8A.25 protein.
          Length = 418

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 49  LAAVSAAPQYYHGSSHWPYHHYDPFSPYV 135
           L A+S   ++   S H PY+HY P S  V
Sbjct: 181 LPAISEESEHEQQSIHIPYNHYPPHSSSV 209


>AL032634-1|CAC35856.2| 1195|Caenorhabditis elegans Hypothetical
           protein Y39G8C.1 protein.
          Length = 1195

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 3/24 (12%)
 Frame = +1

Query: 76  YYHGSSHWPY---HHYDPFSPYVR 138
           YYHG   W +   HHY PF   VR
Sbjct: 532 YYHGCVSWSWFYPHHYAPFISDVR 555


>AF024491-2|AAT92081.1|  765|Caenorhabditis elegans Hypothetical
           protein C24A1.3b protein.
          Length = 765

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
 Frame = +3

Query: 63  GRATVLPWLVTLAVSPLRPLQSLRSGKHVGHTFALVQPCQRNATLGQHDEG--AVVEVPQ 236
           G  T  P  V  A+  L    +  S      T +L    Q+   +  ++ G  A+V + +
Sbjct: 399 GPGTNRPSKVASAIMALNRSDTPSSNASYNSTVSLDD--QQTPVIWAYERGHDAIVALLK 456

Query: 237 HYKRRTVEGD 266
           HY  RTVEGD
Sbjct: 457 HYAARTVEGD 466


>AF024491-1|AAB70312.2|  850|Caenorhabditis elegans Hypothetical
           protein C24A1.3a protein.
          Length = 850

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
 Frame = +3

Query: 63  GRATVLPWLVTLAVSPLRPLQSLRSGKHVGHTFALVQPCQRNATLGQHDEG--AVVEVPQ 236
           G  T  P  V  A+  L    +  S      T +L    Q+   +  ++ G  A+V + +
Sbjct: 399 GPGTNRPSKVASAIMALNRSDTPSSNASYNSTVSLDD--QQTPVIWAYERGHDAIVALLK 456

Query: 237 HYKRRTVEGD 266
           HY  RTVEGD
Sbjct: 457 HYAARTVEGD 466


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,308,818
Number of Sequences: 27780
Number of extensions: 274849
Number of successful extensions: 834
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)