Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20108
(530 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0559 - 4406815-4406922,4408954-4409042,4409177-4409270,440... 31 0.44
06_03_1365 + 29598130-29598523,29599016-29599078,29599292-29599398 31 0.58
01_06_0866 - 32572002-32572541,32572806-32572984,32574330-325744... 30 1.0
01_06_1535 + 38057802-38057999,38058338-38058437,38058730-380588... 30 1.3
07_03_1523 + 27432991-27433199,27433585-27434185,27434468-274346... 29 1.8
07_03_0544 + 19309026-19310105 29 1.8
06_01_0738 + 5458182-5458374,5460512-5461766,5461861-5462053,546... 29 1.8
05_07_0162 + 28090579-28091343 29 1.8
10_01_0264 - 2773835-2774201,2774595-2775330,2775430-2775496 29 2.3
03_05_0755 - 27462388-27463140 29 2.3
01_06_0658 - 30942890-30943054,30943159-30943266,30943448-309435... 29 2.3
11_01_0752 - 6327269-6327764,6328571-6328839 29 3.1
08_02_1406 - 26854845-26855606 28 4.1
06_03_1384 + 29786028-29786657,29788581-29788711,29788987-297890... 28 4.1
05_03_0586 + 15782645-15782721,15782781-15783405 28 4.1
02_05_0912 - 32689665-32690007,32690117-32690275,32690380-326905... 28 4.1
01_05_0551 + 23169751-23170491 28 4.1
08_02_1001 - 23436901-23437410 28 5.4
07_03_0624 + 20044406-20044756,20045168-20045221 28 5.4
03_05_0507 + 25017031-25017333,25017397-25017855 28 5.4
01_05_0503 - 22779025-22779397,22779602-22779627 28 5.4
01_03_0221 - 13916129-13916504,13917183-13917217 28 5.4
03_05_0819 + 27948797-27948956,27948976-27949202 27 7.1
03_02_0539 - 9329572-9330729,9330988-9331041 27 7.1
03_01_0470 + 3619417-3619572,3619681-3619759,3620017-3620258,362... 27 7.1
12_02_0710 - 22371771-22372052,22372368-22372580 27 9.4
09_04_0511 + 18220522-18220752 27 9.4
08_01_0229 + 1834102-1834358,1834442-1834901 27 9.4
06_01_0240 - 1822086-1822216,1822311-1822367,1822788-1822842,182... 27 9.4
04_01_0069 - 697811-697876,697956-698166,698265-698359,698448-69... 27 9.4
03_04_0029 - 16610182-16611753 27 9.4
02_04_0028 + 19027510-19027983,19028087-19028278,19028369-190285... 27 9.4
>11_01_0559 -
4406815-4406922,4408954-4409042,4409177-4409270,
4409344-4409481,4409570-4409727,4409826-4409916,
4410003-4411637
Length = 770
Score = 31.5 bits (68), Expect = 0.44
Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = +2
Query: 302 ARVREGVPP--PLCAGRCVAPPAGPVCAFDAAGTARTFATL-CELEAV--SCRESTYYAV 466
AR+R +PP P CA R PP P A D A + T AT+ + AV CR + AV
Sbjct: 140 ARMRPILPPNIPRCASRRQPPPQCPAAAADDAPSTSTAATVKRQRNAVLTRCRSDSRLAV 199
Query: 467 TSLG 478
G
Sbjct: 200 RGGG 203
>06_03_1365 + 29598130-29598523,29599016-29599078,29599292-29599398
Length = 187
Score = 31.1 bits (67), Expect = 0.58
Identities = 19/53 (35%), Positives = 24/53 (45%)
Frame = -3
Query: 447 SRHETASSSHRVANVLAVPAASKAHTGPAGGATHRPAHSGGGTPSRTLARTSS 289
S TA+++ A AAS A TG A +P SGG T +L SS
Sbjct: 121 SSSATAAAAAAGAGTAGSTAASSASTGNAASTAAKPTASGGATHRLSLISASS 173
>01_06_0866 -
32572002-32572541,32572806-32572984,32574330-32574430,
32574554-32574887,32574915-32575037,32575193-32575394,
32575915-32576097,32576332-32576436,32576553-32576760,
32577025-32577170,32577321-32577443,32577490-32577698,
32577931-32578152,32578189-32578198,32578710-32578763,
32580841-32581052,32581620-32581772,32582071-32582158,
32582192-32582290,32582660-32582907,32584806-32585049
Length = 1260
Score = 30.3 bits (65), Expect = 1.0
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = -3
Query: 441 HETASSSHRVANVLAVPAASKAHTGPAGGATHRPAHSGGGTPSRTLARTSS 289
H +A V +VP AS A + A GAT R HS G T +A++++
Sbjct: 248 HISAGQVKIAEPVFSVPLASTATSHSATGATDRDYHSLGSTNPLPIAKSTN 298
>01_06_1535 +
38057802-38057999,38058338-38058437,38058730-38058890,
38059166-38059363,38059442-38059534,38059732-38059854,
38060637-38060884,38061004-38061175,38061407-38061493,
38061523-38061786,38062415-38062577,38062839-38062926,
38063010-38063079,38063566-38063694,38063773-38063811,
38065539-38065760,38065935-38065999,38066095-38066288,
38066539-38066805,38066908-38066995,38067091-38067216,
38067291-38067400,38067523-38067671
Length = 1117
Score = 29.9 bits (64), Expect = 1.3
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Frame = +2
Query: 188 SDCMDKSRLRQSTVHSNEIGERQEVSAPDMRAP--GELVRAR-VREGVPPPLCAGRCVAP 358
+D + + Q T+ ++E + E P R P G+ V A V V L +GR V P
Sbjct: 700 NDYTSQHEIAQQTLSTSERQPQPEKKPPRTRPPLPGKAVAALCVASFVVGLLLSGRVVVP 759
Query: 359 PAGPVCAFDAAGTARTFATLCELEAVSCRES 451
P + A+ +F+T CE + ES
Sbjct: 760 LLPPGSSSPASNYKTSFSTGCENKRAKLGES 790
>07_03_1523 +
27432991-27433199,27433585-27434185,27434468-27434642,
27434686-27436418,27436871-27437317
Length = 1054
Score = 29.5 bits (63), Expect = 1.8
Identities = 21/66 (31%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Frame = -3
Query: 477 PKLVTA*YVLSRHETASSSHRVANVLA-VPAASKAHTGPAGGATHRPAHSGGGTPSRTLA 301
P L A + H AS S VA + AA G G + HRP P LA
Sbjct: 121 PNLADARGLQRYHRQASQSAAVATTCSRCVAADATGCGSLGASRHRPWRPRAAAPRSALA 180
Query: 300 RTSSPG 283
R++ G
Sbjct: 181 RSTFRG 186
>07_03_0544 + 19309026-19310105
Length = 359
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +1
Query: 253 SRSQRTGYESPG*AGPSEGPRGGATAAVCRAVRGPAG 363
++ R+G +PG GP GGA AAV A G AG
Sbjct: 101 NKRSRSGGAAPGGGVGRGGPGGGAAAAVSSAGGGAAG 137
>06_01_0738 +
5458182-5458374,5460512-5461766,5461861-5462053,
5462151-5462344,5462443-5462601,5462683-5463025
Length = 778
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -3
Query: 393 PAASKAHTGPAGGATHRPAHSGGGT--PSRTLARTSSPGALISG 268
P AS H+G GG + GGG+ P LA + +P A SG
Sbjct: 64 PTASTKHSGSGGGGGAASNNGGGGSAPPPGNLAGSGTPPAKGSG 107
>05_07_0162 + 28090579-28091343
Length = 254
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 326 PPLCAGRCVAPPAGPV 373
PPL GRCV PP PV
Sbjct: 52 PPLAGGRCVGPPLYPV 67
>10_01_0264 - 2773835-2774201,2774595-2775330,2775430-2775496
Length = 389
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = -3
Query: 393 PAASKAHTGPAGGATHRPAHS--GGGTPSRTLARTSSPGALISGALTS*RSP 244
PA+S + + + AT PA G GTP+ T+ PGA + G T+ P
Sbjct: 263 PASSPSGSQKSTTATPTPAAMMPGTGTPTTPTTATAMPGATMPGTATATTMP 314
>03_05_0755 - 27462388-27463140
Length = 250
Score = 29.1 bits (62), Expect = 2.3
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Frame = +3
Query: 216 ASLPFIPTRLGSVKKSAHRI*EPRVSWSERGSARGCH--RRCVQGGAW--PRRQDQCAPL 383
A P P + S R+ + + G +R C RR +Q W RR+DQCA +
Sbjct: 139 ARRPCPPAGRSAAAPSVRRVHSAQELAAGGGHSRQCFDDRRRLQSCCWCCHRRRDQCAAV 198
Query: 384 MQPER 398
QP R
Sbjct: 199 PQPAR 203
>01_06_0658 -
30942890-30943054,30943159-30943266,30943448-30943598,
30943683-30943780,30943869-30944020,30944298-30944403,
30944499-30944588,30944668-30944813,30945396-30945695,
30945953-30946038,30947260-30947996
Length = 712
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -1
Query: 329 AVAPPRGPSLGPAHPGLSYPVR*LLDAPQSRWN 231
AV PP GP+L P PG + L WN
Sbjct: 140 AVPPPGGPALRPPRPGAVVALHLLCGCSSGPWN 172
>11_01_0752 - 6327269-6327764,6328571-6328839
Length = 254
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = +1
Query: 274 YESPG*AGPSEGPRGGATAAVCRAVRGPAGRTSVRL*CSRNGE 402
+ SP G PR G A AV G AGR + RL S G+
Sbjct: 103 HASPPTGGSPRPPRSGGGDATSAAVGGGAGRGAARLLPSTRGD 145
>08_02_1406 - 26854845-26855606
Length = 253
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +2
Query: 311 REGVPPPLCAGRCVAPPAGPVCAFDAAGTA 400
R+GVPP C G+CV G C AG A
Sbjct: 196 RDGVPPCCCCGQCV---CGGGCFVGCAGLA 222
>06_03_1384 +
29786028-29786657,29788581-29788711,29788987-29789028,
29789383-29789441,29789774-29790070,29790180-29790289,
29790966-29791070,29791201-29791263,29791766-29791933,
29792111-29792248
Length = 580
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +1
Query: 235 QRDWGASRSQRTGYESPG*AGPSEGPRGGATAAVCRAVRGPAGRTSVR 378
+R S S G+++PG A PS P GGA+ PA T R
Sbjct: 53 RRRGSKSGSTTPGHQTPGVAWPSPYPSGGASPLPAGVSPSPARSTPRR 100
>05_03_0586 + 15782645-15782721,15782781-15783405
Length = 233
Score = 28.3 bits (60), Expect = 4.1
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -3
Query: 408 NVLAVPAASKAHTGPAGGATHRPAHSGGGTPSRTLARTS 292
+VLA AAS+ PA A R + GGG P LA ++
Sbjct: 4 DVLAAAAASRRRAAPATAAGRR-RYGGGGQPVSDLAAST 41
>02_05_0912 -
32689665-32690007,32690117-32690275,32690380-32690573,
32690669-32690861,32690956-32692169
Length = 700
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -3
Query: 393 PAASKAHTGPAGGATHRPAHSGGGTPSRTLARTSSPGA 280
PA S + P G AT+R SGGG S T + + G+
Sbjct: 92 PANSTSPEPPGGAATNRRGSSGGGGFSATGGQAGTNGS 129
>01_05_0551 + 23169751-23170491
Length = 246
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = -3
Query: 426 SSHRVANVLAVPAASKAHTGPAGGATHRPAHSGGGTPSRTLARTSS 289
+S+R+ + P H G GG HR G+ R A T S
Sbjct: 42 TSNRLLSTCRFPRTPSLHGGGGGGGDHRTTDDDDGSNGRDQAATLS 87
>08_02_1001 - 23436901-23437410
Length = 169
Score = 27.9 bits (59), Expect = 5.4
Identities = 19/42 (45%), Positives = 21/42 (50%)
Frame = +1
Query: 220 VYRSFQRDWGASRSQRTGYESPG*AGPSEGPRGGATAAVCRA 345
+ R QR W +RSQR G G G GGATAAV A
Sbjct: 98 IRRKLQR-WRMARSQRPSSRWRG--GDGGGVGGGATAAVVEA 136
>07_03_0624 + 20044406-20044756,20045168-20045221
Length = 134
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 414 VANVLAVPAASKAHTGPAGGATHRPAHSGGG 322
VA + ++P +K G AGG R A GGG
Sbjct: 11 VARLPSLPDPAKGGRGEAGGGRRRGADDGGG 41
>03_05_0507 + 25017031-25017333,25017397-25017855
Length = 253
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = -3
Query: 414 VANVLAVPAASKAHTGPAGGATHRPAHSGGGTPSRTLARTSSPGALISG 268
V ++ A+P AH G A GGG R LAR++ G + G
Sbjct: 142 VRDLAAIPEDRWAHDGDYFERPLDDARGGGGVLFRVLARSAVAGGRVKG 190
>01_05_0503 - 22779025-22779397,22779602-22779627
Length = 132
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -3
Query: 183 LYKQKPFRLTFPTESKYRHHRTAYEIVLIRNTNVARLSN 67
LYK + ++L + E+K+R+ TA IR + LSN
Sbjct: 42 LYKSQEYKLHYTLETKHRNRNTANSKDGIRMAAMENLSN 80
>01_03_0221 - 13916129-13916504,13917183-13917217
Length = 136
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +1
Query: 199 G*KPTAPVYRSFQRDWGASRSQRTGYESPG*AGPSEGPRGGATAAVCRAVR 351
G + T+PV + DW A+ ++R G S G G +G G RA R
Sbjct: 83 GHRSTSPVRTPRRSDWAAATARRGGAASGGVCGEEKGRCRGEELGRRRAGR 133
>03_05_0819 + 27948797-27948956,27948976-27949202
Length = 128
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Frame = -3
Query: 339 AHSGGGTPSRT--LARTSSPGALISGA 265
A GGG+PSRT LART++P A S +
Sbjct: 18 AAGGGGSPSRTPRLARTAAPFASSSSS 44
>03_02_0539 - 9329572-9330729,9330988-9331041
Length = 403
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -3
Query: 399 AVPAASKAHTGPAGGATHRPAHSGGGTPSRTLARTSSPGALISGAL 262
A AS + + P+ A R GG +P + A ++ PG +GA+
Sbjct: 153 AAAGASSSSSKPSSSAA-RQLPGGGASPMPSAAASTQPGGAAAGAI 197
>03_01_0470 +
3619417-3619572,3619681-3619759,3620017-3620258,
3620804-3621148,3623592-3624116
Length = 448
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 4/30 (13%)
Frame = -1
Query: 353 PRTALHTAAVAPPR----GPSLGPAHPGLS 276
P ALHT APP GP+ AHP L+
Sbjct: 130 PSPALHTRTAAPPSHCRPGPAPSGAHPSLA 159
>12_02_0710 - 22371771-22372052,22372368-22372580
Length = 164
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 349 APPCTQRRWHPLADPRSDQLT 287
APP Q R H L P++DQ+T
Sbjct: 85 APPTDQTRVHGLKGPQADQIT 105
>09_04_0511 + 18220522-18220752
Length = 76
Score = 27.1 bits (57), Expect = 9.4
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = -3
Query: 450 LSRHETASSSHRVANVLAVPAASKAHTGPAGGATHRPAHSGGGTPSRTLARTSSPGA 280
+SR + A +A+ L + A+ A P G A GGG +R+ A T + GA
Sbjct: 1 MSRQQAAPPL-ALASALLLLLAAAAAVAPLGAAADGGLVQGGGEVARSAANTLAVGA 56
>08_01_0229 + 1834102-1834358,1834442-1834901
Length = 238
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 297 SERGSARGCHRRCVQGGAWPRRQD 368
SE +RG HR C++G A R+D
Sbjct: 72 SETAGSRGSHRGCLRGRAVAERRD 95
>06_01_0240 -
1822086-1822216,1822311-1822367,1822788-1822842,
1824585-1824674,1824848-1824995,1825095-1825351
Length = 245
Score = 27.1 bits (57), Expect = 9.4
Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
Frame = -3
Query: 450 LSRHETASSSHRVANVLAVPAASKAHTGPAGGATHRPAHSGG--GTPSRTLARTSSPGAL 277
L + ++SSS R A AA+ A P GG R GG G R + G L
Sbjct: 26 LPMNPSSSSSSRGAASYHSKAAAFASPQPRGGGGGRGGRRGGGRGRGGDGSDRIDALGRL 85
Query: 276 ISGALTS*RSPISLE*TVDWRSRLLSIQSLKL 181
++ L S ++LE D R+ + L L
Sbjct: 86 LTRILRHMASELNLEMRTDGYVRVRDLLKLNL 117
>04_01_0069 -
697811-697876,697956-698166,698265-698359,698448-698513,
698595-698643,698720-698770,698856-698908,699263-699331,
699874-699928,700011-700099,700217-700302,700376-700432,
700575-700716,701637-702032
Length = 494
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/55 (29%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = -1
Query: 431 PRVHIE*-RMSSPFRLHQRRTLVLPAGPRTALHTAAVAPPRGPSLGPAHPGLSYP 270
P H+ R +SP + + P P T A PP P++ PA P P
Sbjct: 45 PGAHVHYFRAASPIPIFRAAASSRPPRPPPPSTTTAPPPPAAPAVTPARPPPQQP 99
>03_04_0029 - 16610182-16611753
Length = 523
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -3
Query: 450 LSRHETASSSHRVANVLAVPAASKAHTGPAGGATHRPAH 334
L R S + N LA A ++A T A GAT RP H
Sbjct: 222 LIRFHEVSPWFALPNALANAAIAQASTCGAAGATPRPLH 260
>02_04_0028 +
19027510-19027983,19028087-19028278,19028369-19028545,
19029568-19029663,19030487-19030618,19030950-19031008,
19031234-19031321,19031433-19031693
Length = 492
Score = 27.1 bits (57), Expect = 9.4
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 217 PVYRSFQRDWGASRSQRTGYESPG*AGPSEGPRGGATAA 333
P++R + WG+S S T +PG A + +GG +AA
Sbjct: 54 PLWRPPRWPWGSSSSAATA-AAPGGASTAAAAQGGGSAA 91
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,953,110
Number of Sequences: 37544
Number of extensions: 387027
Number of successful extensions: 1798
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1795
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1178343540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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