Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20108
         (530 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            27   0.52 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   1.2  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   1.2  
EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    25   1.6  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   2.8  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   2.8  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          24   3.7  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   4.8  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     23   8.4  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   8.4  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 26.6 bits (56), Expect = 0.52
 Identities = 21/70 (30%), Positives = 29/70 (41%)
 Frame = -3

Query: 471  LVTA*YVLSRHETASSSHRVANVLAVPAASKAHTGPAGGATHRPAHSGGGTPSRTLARTS 292
            L T  +V  RH+   +S+  +N   VPA   A    A  A   P   G GT    L    
Sbjct: 936  LKTYDFVRDRHKIRCASYVSSNATVVPATQPADASQASPA-EEPLPDGTGT-GDFLVYYD 993

Query: 291  SPGALISGAL 262
            +   L +GA+
Sbjct: 994  NSSTLCTGAI 1003


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 13/42 (30%), Positives = 17/42 (40%)
 Frame = -3

Query: 450 LSRHETASSSHRVANVLAVPAASKAHTGPAGGATHRPAHSGG 325
           +SR     SS+R A     P       G  G   H+P + GG
Sbjct: 13  MSRSSYTRSSYRSAYYGGPPEIGGTGAGALGSQQHQPPYGGG 54


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -3

Query: 369 GPAGGATHRPAHSGGGTPSRTLARTSSPGAL 277
           G   G   RPA+SG   PS    +T  P  L
Sbjct: 100 GDRNGDGGRPAYSGNSDPSMDQVKTDKPREL 130


>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
 Frame = +2

Query: 149 GNVKRKGF--CLYSFSDCMDKSRLRQSTVHSNEIGERQEVSAPDMRAPG 289
           G  K++ F   L       D SRL QS ++S  +  R E + P    PG
Sbjct: 85  GRAKKQSFSEALEKIERDYDNSRLEQSWIYSLCMRCRVEYTTPSWEPPG 133


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +1

Query: 283 PG*AGPSEGPRGGATAAVCRAVRGPAG 363
           PG AGP+  P GG         +GP G
Sbjct: 394 PGIAGPAGAPGGGEGRPGAPGPKGPRG 420


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 8/31 (25%), Positives = 14/31 (45%)
 Frame = +3

Query: 321 CHRRCVQGGAWPRRQDQCAPLMQPERRGHSL 413
           C  +C + G W +  +QC      + +G  L
Sbjct: 472 CSEQCSKAGCWGKGPEQCLECKNVKYKGKCL 502


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +2

Query: 323 PPPLCAGRCVAPPAGPVCAFDAAGTAR 403
           PPP  +GR     +GP  A  AAGT R
Sbjct: 738 PPPSESGRETPLLSGPSYAAAAAGTIR 764


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.4 bits (48), Expect = 4.8
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -1

Query: 353 PRTALHTAAVAPPRGPSLGPAHPGLSYPVR 264
           PRT   T    PPR   + P  PG+  P+R
Sbjct: 201 PRTGTPTQP-QPPRPGGMYPQPPGVPMPMR 229


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = +1

Query: 196 YG*KPTAPVYRSFQRDWGASRSQRTGYESPG*AGP 300
           Y  +P  P++ +     G  RS  T   SPG  GP
Sbjct: 427 YQLQPMQPMFTAQSTSPGPDRSPATLTPSPGIGGP 461


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
            protein.
          Length = 988

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -2

Query: 307  PRSDQLTRGSHIRCADFLTLPNLV 236
            PRSD++      RC   +T+ N+V
Sbjct: 956  PRSDRIRNEMQQRCHSRVTMDNIV 979


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 592,484
Number of Sequences: 2352
Number of extensions: 13311
Number of successful extensions: 49
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49051644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)