Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20107
(526 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 156 8e-39
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 156 8e-39
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 150 7e-37
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 140 4e-34
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 107 6e-24
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 107 6e-24
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 100 6e-22
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 66 1e-11
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 66 1e-11
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 57 9e-09
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 57 9e-09
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 57 9e-09
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 36 0.018
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 32 0.29
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 31 0.67
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 29 2.0
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 28 3.6
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 28 3.6
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 28 3.6
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 27 8.2
U41278-1|AAK31511.1| 305|Caenorhabditis elegans Hypothetical pr... 27 8.2
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 27 8.2
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 156 bits (379), Expect = 8e-39
Identities = 73/85 (85%), Positives = 76/85 (89%)
Frame = +2
Query: 2 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIXXAGTGEFEAGISKNGQTREHALLAFTLG 181
YY+TIIDAPGHRDFIKNMITGTSQADCAVL+ GTGEFEAGISKNGQTREHALLA TLG
Sbjct: 85 YYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLG 144
Query: 182 VKQLIVGVNKMDSTEPPYXEPRFEE 256
VKQLIV NKMDSTEPP+ E RF E
Sbjct: 145 VKQLIVACNKMDSTEPPFSEARFTE 169
Score = 140 bits (340), Expect = 4e-34
Identities = 63/86 (73%), Positives = 71/86 (82%)
Frame = +1
Query: 256 IKKEVSSYXKKIGYNPAAXXFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKXLI 435
I EVS + KKIGYNP A FVPISG++GDNMLE S+ MPWFKGW VERKEG A GK L+
Sbjct: 170 ITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLL 229
Query: 436 EALDAILPPARPTDKPLRLPLQDVSK 513
EALD+I+PP RPTD+PLRLPLQDV K
Sbjct: 230 EALDSIIPPQRPTDRPLRLPLQDVYK 255
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 156 bits (379), Expect = 8e-39
Identities = 73/85 (85%), Positives = 76/85 (89%)
Frame = +2
Query: 2 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIXXAGTGEFEAGISKNGQTREHALLAFTLG 181
YY+TIIDAPGHRDFIKNMITGTSQADCAVL+ GTGEFEAGISKNGQTREHALLA TLG
Sbjct: 85 YYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLG 144
Query: 182 VKQLIVGVNKMDSTEPPYXEPRFEE 256
VKQLIV NKMDSTEPP+ E RF E
Sbjct: 145 VKQLIVACNKMDSTEPPFSEARFTE 169
Score = 140 bits (340), Expect = 4e-34
Identities = 63/86 (73%), Positives = 71/86 (82%)
Frame = +1
Query: 256 IKKEVSSYXKKIGYNPAAXXFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKXLI 435
I EVS + KKIGYNP A FVPISG++GDNMLE S+ MPWFKGW VERKEG A GK L+
Sbjct: 170 ITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLL 229
Query: 436 EALDAILPPARPTDKPLRLPLQDVSK 513
EALD+I+PP RPTD+PLRLPLQDV K
Sbjct: 230 EALDSIIPPQRPTDRPLRLPLQDVYK 255
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 150 bits (363), Expect = 7e-37
Identities = 90/164 (54%), Positives = 97/164 (59%)
Frame = +2
Query: 2 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIXXAGTGEFEAGISKNGQTREHALLAFTLG 181
YY+TIIDAPGHRDFIKNMITGTSQADCAVL+ GTGEFEAGISKNGQTREHALLA TLG
Sbjct: 85 YYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLG 144
Query: 182 VKQLIVGVNKMDSTEPPYXEPRFEESRRKYPHXXXXXXXXXXXXXSCPFLDGTETTCWSL 361
VKQL+ S P P + SRR P D TETTC
Sbjct: 145 VKQLV-------SLRSPTRSP--DSSRRS------DTIQRLFHLSQSP--DSTETTCLRS 187
Query: 362 QPKCLGSRDGRWSVKKAKLTEXASLKLSMPSCHLPAPLTSPCVF 493
C GSRDG + +K L E S +L PS H A LT VF
Sbjct: 188 PRTCHGSRDGLLNARKETLPERPSSRLLTPSSHHNAQLTDHSVF 231
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 140 bits (340), Expect = 4e-34
Identities = 63/86 (73%), Positives = 71/86 (82%)
Frame = +1
Query: 256 IKKEVSSYXKKIGYNPAAXXFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKXLI 435
I EVS + KKIGYNP A FVPISG++GDNMLE S+ MPWFKGW VERKEG A GK L+
Sbjct: 136 ITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLL 195
Query: 436 EALDAILPPARPTDKPLRLPLQDVSK 513
EALD+I+PP RPTD+PLRLPLQDV K
Sbjct: 196 EALDSIIPPQRPTDRPLRLPLQDVYK 221
Score = 68.9 bits (161), Expect(2) = 3e-17
Identities = 29/31 (93%), Positives = 31/31 (100%)
Frame = +2
Query: 2 YYVTIIDAPGHRDFIKNMITGTSQADCAVLI 94
YY+TIIDAPGHRDFIKNMITGTSQADCAVL+
Sbjct: 85 YYITIIDAPGHRDFIKNMITGTSQADCAVLV 115
Score = 36.7 bits (81), Expect(2) = 3e-17
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +2
Query: 191 LIVGVNKMDSTEPPYXEPRFEE 256
L+V NKMDSTEPP+ E RF E
Sbjct: 114 LVVACNKMDSTEPPFSEARFTE 135
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 107 bits (256), Expect = 6e-24
Identities = 49/83 (59%), Positives = 63/83 (75%)
Frame = +2
Query: 8 VTIIDAPGHRDFIKNMITGTSQADCAVLIXXAGTGEFEAGISKNGQTREHALLAFTLGVK 187
+ ++DAPGH+DFI NMITGTSQAD A+L+ A TGEFE G GQT+EHALL +LGV
Sbjct: 250 IVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALLLRSLGVT 309
Query: 188 QLIVGVNKMDSTEPPYXEPRFEE 256
QLIV VNK+D+ + + + RF+E
Sbjct: 310 QLIVAVNKLDTVD--WSQDRFDE 330
Score = 41.9 bits (94), Expect = 3e-04
Identities = 22/66 (33%), Positives = 38/66 (57%)
Frame = +1
Query: 316 FVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKXLIEALDAILPPARPTDKPLRLP 495
FVP+SG+ G+N+++ ++ W+ DG L+E +D+ + P P+D PLR+
Sbjct: 350 FVPVSGFTGENLIK-RMELDWY------------DGPCLLELIDSFVAPQPPSDGPLRIG 396
Query: 496 LQDVSK 513
+ DV K
Sbjct: 397 ISDVLK 402
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 107 bits (256), Expect = 6e-24
Identities = 49/83 (59%), Positives = 63/83 (75%)
Frame = +2
Query: 8 VTIIDAPGHRDFIKNMITGTSQADCAVLIXXAGTGEFEAGISKNGQTREHALLAFTLGVK 187
+ ++DAPGH+DFI NMITGTSQAD A+L+ A TGEFE G GQT+EHALL +LGV
Sbjct: 268 IVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALLLRSLGVT 327
Query: 188 QLIVGVNKMDSTEPPYXEPRFEE 256
QLIV VNK+D+ + + + RF+E
Sbjct: 328 QLIVAVNKLDTVD--WSQDRFDE 348
Score = 41.9 bits (94), Expect = 3e-04
Identities = 22/66 (33%), Positives = 38/66 (57%)
Frame = +1
Query: 316 FVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKXLIEALDAILPPARPTDKPLRLP 495
FVP+SG+ G+N+++ ++ W+ DG L+E +D+ + P P+D PLR+
Sbjct: 368 FVPVSGFTGENLIK-RMELDWY------------DGPCLLELIDSFVAPQPPSDGPLRIG 414
Query: 496 LQDVSK 513
+ DV K
Sbjct: 415 ISDVLK 420
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 100 bits (240), Expect = 6e-22
Identities = 46/88 (52%), Positives = 59/88 (67%)
Frame = +2
Query: 5 YVTIIDAPGHRDFIKNMITGTSQADCAVLIXXAGTGEFEAGISKNGQTREHALLAFTLGV 184
+ TI+DAPGH+ F+ NMI G +QAD AVL+ A GEFE G + GQTREH++L T GV
Sbjct: 188 HFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFDRGGQTREHSMLVKTAGV 247
Query: 185 KQLIVGVNKMDSTEPPYXEPRFEESRRK 268
K L++ VNKMD + E RF+E K
Sbjct: 248 KHLVILVNKMDDPTVKWEEERFKEIEGK 275
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 66.1 bits (154), Expect = 1e-11
Identities = 35/69 (50%), Positives = 42/69 (60%)
Frame = +2
Query: 20 DAPGHRDFIKNMITGTSQADCAVLIXXAGTGEFEAGISKNGQTREHALLAFTLGVKQLIV 199
D PGH DFIKNMI GTSQ D AVL+ A G E QT+EH +LA +GVK + +
Sbjct: 114 DCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME-------QTKEHLILAKQVGVKNMAI 166
Query: 200 GVNKMDSTE 226
+NK D E
Sbjct: 167 FINKADLVE 175
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 66.1 bits (154), Expect = 1e-11
Identities = 35/69 (50%), Positives = 42/69 (60%)
Frame = +2
Query: 20 DAPGHRDFIKNMITGTSQADCAVLIXXAGTGEFEAGISKNGQTREHALLAFTLGVKQLIV 199
D PGH DFIKNMI GTSQ D AVL+ A G E QT+EH +LA +GVK + +
Sbjct: 114 DCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME-------QTKEHLILAKQVGVKNMAI 166
Query: 200 GVNKMDSTE 226
+NK D E
Sbjct: 167 FINKADLVE 175
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 56.8 bits (131), Expect = 9e-09
Identities = 36/79 (45%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Frame = +2
Query: 17 IDAPGHRDFIKNMITGTSQADCAVLIXXAGTGEFEAGISKNGQTREHALLAFTLGV--KQ 190
ID PGH D+IKNMITG +Q + A+L+ A G QTREH LLA +GV
Sbjct: 117 IDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLLLARQVGVPLDN 169
Query: 191 LIVGVNKMDSTEPPYXEPR 247
++V +NK+D E P E R
Sbjct: 170 IVVFMNKVD--EVPDAETR 186
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 56.8 bits (131), Expect = 9e-09
Identities = 36/79 (45%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Frame = +2
Query: 17 IDAPGHRDFIKNMITGTSQADCAVLIXXAGTGEFEAGISKNGQTREHALLAFTLGV--KQ 190
ID PGH D+IKNMITG +Q + A+L+ A G QTREH LLA +GV
Sbjct: 118 IDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLLLARQVGVPLDN 170
Query: 191 LIVGVNKMDSTEPPYXEPR 247
++V +NK+D E P E R
Sbjct: 171 IVVFMNKVD--EVPDAETR 187
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 56.8 bits (131), Expect = 9e-09
Identities = 36/79 (45%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Frame = +2
Query: 17 IDAPGHRDFIKNMITGTSQADCAVLIXXAGTGEFEAGISKNGQTREHALLAFTLGV--KQ 190
ID PGH D+IKNMITG +Q + A+L+ A G QTREH LLA +GV
Sbjct: 118 IDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLLLARQVGVPLDN 170
Query: 191 LIVGVNKMDSTEPPYXEPR 247
++V +NK+D E P E R
Sbjct: 171 IVVFMNKVD--EVPDAETR 187
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 37.9 bits (84), Expect = 0.004
Identities = 24/73 (32%), Positives = 38/73 (52%)
Frame = +2
Query: 8 VTIIDAPGHRDFIKNMITGTSQADCAVLIXXAGTGEFEAGISKNGQTREHALLAFTLGVK 187
+ +ID PGH I+ ++ ++ D A++I + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPN 126
Query: 188 QLIVGVNKMDSTE 226
++I+ +NK D E
Sbjct: 127 RVIIVLNKCDLAE 139
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 35.9 bits (79), Expect = 0.018
Identities = 26/70 (37%), Positives = 31/70 (44%)
Frame = +2
Query: 8 VTIIDAPGHRDFIKNMITGTSQADCAVLIXXAGTGEFEAGISKNGQTREHALLAFTLGVK 187
VT +D PGH F G AD VL+ A G E QT + A V
Sbjct: 206 VTFLDTPGHAAFASMRARGAKGADIVVLVVAADDGVKE-------QTAQSIKFAKDANV- 257
Query: 188 QLIVGVNKMD 217
QL+V VNK+D
Sbjct: 258 QLVVAVNKID 267
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 31.9 bits (69), Expect = 0.29
Identities = 21/84 (25%), Positives = 36/84 (42%)
Frame = +2
Query: 5 YVTIIDAPGHRDFIKNMITGTSQADCAVLIXXAGTGEFEAGISKNGQTREHALLAFTLGV 184
+V+ +D PGH + M+ G + D A L+ AG QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLL-VAGNEP-----CPQPQTSEHLAAVEIMQL 181
Query: 185 KQLIVGVNKMDSTEPPYXEPRFEE 256
L++ NK+D + +E+
Sbjct: 182 NHLMILQNKVDIIKESQARENYEQ 205
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 30.7 bits (66), Expect = 0.67
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = +2
Query: 2 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIXXAGTGEFEAGISKNGQTREHALLAFTLG 181
Y + +ID PGH DF + + D +L+ A G QT + LAF
Sbjct: 102 YLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG-------VQAQTIANFWLAFEKN 154
Query: 182 VKQLIVGVNKMD 217
+ Q+I +NK+D
Sbjct: 155 I-QIIPVINKID 165
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -2
Query: 210 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAXXMSTA 82
LF PT+SC+ + AS S P + PA N VP +S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +2
Query: 2 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIXXAGTG 112
Y + IID PGH +F M AD V++ A G
Sbjct: 201 YLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +2
Query: 2 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIXXAGTG 112
Y + IID PGH +F M AD V++ A G
Sbjct: 76 YLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 28.3 bits (60), Expect = 3.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 14 IIDAPGHRDFIKNMITGTSQADCAVLI 94
IID PGH F G+S D A+L+
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILV 579
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 27.5 bits (58), Expect = 6.2
Identities = 23/70 (32%), Positives = 29/70 (41%)
Frame = +2
Query: 8 VTIIDAPGHRDFIKNMITGTSQADCAVLIXXAGTGEFEAGISKNGQTREHALLAFTLGVK 187
+ IID PGH DF + D AVL+ G G G+ T L + +
Sbjct: 114 INIIDTPGHVDFTVEVERALRVLDGAVLV-LCGVG----GVQSQTFTVNRQLARYNV--- 165
Query: 188 QLIVGVNKMD 217
I VNKMD
Sbjct: 166 PFICFVNKMD 175
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.1 bits (57), Expect = 8.2
Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = +2
Query: 8 VTIIDAPGHRDFI--KNMITGTSQA 76
V IID+ G RDFI KN+ GT+ A
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGTADA 97
>U41278-1|AAK31511.1| 305|Caenorhabditis elegans Hypothetical
protein F33G12.2 protein.
Length = 305
Score = 27.1 bits (57), Expect = 8.2
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = -2
Query: 327 NGHEXXSSWVVANLLXV*GYFLLDSSNLGSLYGGSVESILFTPTMSCL 184
NGHE + N Y + D + G SV S+ FTP +CL
Sbjct: 153 NGHEIVAGSADGNYRV---YSIRDGNMTVDYMGDSVNSVSFTPDSNCL 197
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 27.1 bits (57), Expect = 8.2
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = +2
Query: 2 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIXXAGTG 112
+ + +ID+PGH DF + D A+++ +G
Sbjct: 110 FLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,325,930
Number of Sequences: 27780
Number of extensions: 239104
Number of successful extensions: 713
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 705
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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