Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20106
         (611 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ237705-1|CAB40346.1|  557|Anopheles gambiae putative apyrase p...    24   3.4  
AJ237704-1|CAB40345.1|  557|Anopheles gambiae apyrase protein.         24   3.4  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    23   5.9  

>AJ237705-1|CAB40346.1|  557|Anopheles gambiae putative apyrase
           protein.
          Length = 557

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 15/49 (30%), Positives = 22/49 (44%)
 Frame = -2

Query: 574 IGLXTHEFLLDVLSDLGIVEEVLFLVTFPVDEENPLGKLLLRVQGFGQG 428
           IG  +H FL    S     ++   L  +PV   N  G+ +L VQ +  G
Sbjct: 250 IGGHSHSFLFPNASSKPHNQQDTILGDYPVVVSNANGRKILIVQAYAYG 298


>AJ237704-1|CAB40345.1|  557|Anopheles gambiae apyrase protein.
          Length = 557

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 15/49 (30%), Positives = 22/49 (44%)
 Frame = -2

Query: 574 IGLXTHEFLLDVLSDLGIVEEVLFLVTFPVDEENPLGKLLLRVQGFGQG 428
           IG  +H FL    S     ++   L  +PV   N  G+ +L VQ +  G
Sbjct: 250 IGGHSHSFLFPNASSKPHNQQDTILGDYPVVVSNANGRKILIVQAYAYG 298


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = +3

Query: 441 PWTRRSSLPRGFSSSTGKVTKNRTSSTMPRSLNTSR 548
           PW +R  + +   ++ G+  + RTS T  ++L   +
Sbjct: 262 PWMKRVHIGQSTVNANGETKRQRTSYTRYQTLELEK 297


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 596,728
Number of Sequences: 2352
Number of extensions: 11402
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59711994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)