Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20106
(611 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK131421-1|BAD18568.1| 505|Homo sapiens protein kinase (Mtssk).... 33 1.0
X62320-1|CAA44196.1| 593|Homo sapiens Epithelin 1 & 2 protein. 30 5.6
BT006844-1|AAP35490.1| 438|Homo sapiens granulin protein. 30 5.6
BC010577-1|AAH10577.1| 593|Homo sapiens granulin protein. 30 5.6
BC000324-1|AAH00324.1| 438|Homo sapiens granulin protein. 30 5.6
AY124489-1|AAM94026.1| 593|Homo sapiens PC cell-derived growth ... 30 5.6
AK222522-1|BAD96242.1| 593|Homo sapiens granulin variant protein. 30 5.6
AK023348-1|BAB14535.1| 413|Homo sapiens protein ( Homo sapiens ... 30 5.6
AF055008-1|AAC09359.1| 593|Homo sapiens epithelin 1 and 2 protein. 30 5.6
BC100867-1|AAI00868.1| 161|Homo sapiens urocortin 3 (stresscopi... 30 7.4
AL683826-1|CAI23624.1| 161|Homo sapiens urocortin 3 (stresscopi... 30 7.4
AY830839-1|AAW52510.1| 2434|Homo sapiens serine/threonine protei... 29 9.8
AK057601-1|BAB71532.1| 484|Homo sapiens A. protein. 29 9.8
>AK131421-1|BAD18568.1| 505|Homo sapiens protein kinase (Mtssk).
protein.
Length = 505
Score = 32.7 bits (71), Expect = 1.0
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 454 EAACREDFLHPQGKSLKTGPPPRCRDHSI 540
E CR +HP+ +SL G P C DH I
Sbjct: 162 ENRCRNTPMHPRSRSLSPGRSPACCDHEI 190
>X62320-1|CAA44196.1| 593|Homo sapiens Epithelin 1 & 2 protein.
Length = 593
Score = 30.3 bits (65), Expect = 5.6
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +2
Query: 8 EGVCS----HRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVL 133
+GVC H C +G CA RG L PR + AL+++L
Sbjct: 548 QGVCCADRRHCCPAGFRCAARGTKCLRREAPRWDAPLRDPALRQLL 593
>BT006844-1|AAP35490.1| 438|Homo sapiens granulin protein.
Length = 438
Score = 30.3 bits (65), Expect = 5.6
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +2
Query: 8 EGVCS----HRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVL 133
+GVC H C +G CA RG L PR + AL+++L
Sbjct: 393 QGVCCADRRHCCPAGFRCAARGTKCLRREAPRWDAPLRDPALRQLL 438
>BC010577-1|AAH10577.1| 593|Homo sapiens granulin protein.
Length = 593
Score = 30.3 bits (65), Expect = 5.6
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +2
Query: 8 EGVCS----HRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVL 133
+GVC H C +G CA RG L PR + AL+++L
Sbjct: 548 QGVCCADRRHCCPAGFRCAARGTKCLRREAPRWDAPLRDPALRQLL 593
>BC000324-1|AAH00324.1| 438|Homo sapiens granulin protein.
Length = 438
Score = 30.3 bits (65), Expect = 5.6
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +2
Query: 8 EGVCS----HRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVL 133
+GVC H C +G CA RG L PR + AL+++L
Sbjct: 393 QGVCCADRRHCCPAGFRCAARGTKCLRREAPRWDAPLRDPALRQLL 438
>AY124489-1|AAM94026.1| 593|Homo sapiens PC cell-derived growth
factor protein.
Length = 593
Score = 30.3 bits (65), Expect = 5.6
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +2
Query: 8 EGVCS----HRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVL 133
+GVC H C +G CA RG L PR + AL+++L
Sbjct: 548 QGVCCADRRHCCPAGFRCAARGTKCLRREAPRWDAPLRDPALRQLL 593
>AK222522-1|BAD96242.1| 593|Homo sapiens granulin variant protein.
Length = 593
Score = 30.3 bits (65), Expect = 5.6
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +2
Query: 8 EGVCS----HRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVL 133
+GVC H C +G CA RG L PR + AL+++L
Sbjct: 548 QGVCCADRRHCCPAGFRCAARGTKCLRREAPRWDAPLRDPALRQLL 593
>AK023348-1|BAB14535.1| 413|Homo sapiens protein ( Homo sapiens
cDNA FLJ13286 fis, clone OVARC1001154, highly similar to
Homo sapiens clone 24720 epithelin 1 and 2 mRNA. ).
Length = 413
Score = 30.3 bits (65), Expect = 5.6
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +2
Query: 8 EGVCS----HRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVL 133
+GVC H C +G CA RG L PR + AL+++L
Sbjct: 368 QGVCCADRRHCCPAGFRCAARGTKCLRREAPRWDAPLRDPALRQLL 413
>AF055008-1|AAC09359.1| 593|Homo sapiens epithelin 1 and 2 protein.
Length = 593
Score = 30.3 bits (65), Expect = 5.6
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +2
Query: 8 EGVCS----HRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVL 133
+GVC H C +G CA RG L PR + AL+++L
Sbjct: 548 QGVCCADRRHCCPAGFRCAARGTKCLRREAPRWDAPLRDPALRQLL 593
>BC100867-1|AAI00868.1| 161|Homo sapiens urocortin 3 (stresscopin)
protein.
Length = 161
Score = 29.9 bits (64), Expect = 7.4
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +3
Query: 183 ASLYLKRSYHYLLSASYFNNYQTNGKDSRS--SSGNYRTIRGRKPLVS*STSLRGVGRWT 356
ASL KRS+HYL S + + GK+ ++ SG RG + RG R
Sbjct: 51 ASLLSKRSFHYLRSRDASSGEEEEGKEKKTFPISGARGGARGTRYRYVSQAQPRGKPRQD 110
Query: 357 SRVTPH 374
+ +PH
Sbjct: 111 TAKSPH 116
>AL683826-1|CAI23624.1| 161|Homo sapiens urocortin 3 (stresscopin)
protein.
Length = 161
Score = 29.9 bits (64), Expect = 7.4
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +3
Query: 183 ASLYLKRSYHYLLSASYFNNYQTNGKDSRS--SSGNYRTIRGRKPLVS*STSLRGVGRWT 356
ASL KRS+HYL S + + GK+ ++ SG RG + RG R
Sbjct: 51 ASLLSKRSFHYLRSRDASSGEEEEGKEKKTFPISGARGGARGTRYRYVSQAQPRGKPRQD 110
Query: 357 SRVTPH 374
+ +PH
Sbjct: 111 TAKSPH 116
>AY830839-1|AAW52510.1| 2434|Homo sapiens serine/threonine protein
kinase protein.
Length = 2434
Score = 29.5 bits (63), Expect = 9.8
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 454 EAACREDFLHPQGKSLKTGPPPRCRDHSI 540
E CR + P+ +SL G P C DH I
Sbjct: 152 ENRCRNTPMRPRSRSLSPGRSPACCDHEI 180
>AK057601-1|BAB71532.1| 484|Homo sapiens A. protein.
Length = 484
Score = 29.5 bits (63), Expect = 9.8
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 454 EAACREDFLHPQGKSLKTGPPPRCRDHSI 540
E CR + P+ +SL G P C DH I
Sbjct: 147 ENRCRNTPMRPRSRSLSPGRSPACCDHEI 175
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,477,717
Number of Sequences: 237096
Number of extensions: 1836891
Number of successful extensions: 4273
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4273
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -