Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20106
(611 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle pr... 26 0.33
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 3.1
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 3.1
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 3.1
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 23 3.1
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 3.1
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 3.1
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 3.1
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 23 3.1
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 3.1
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 5.4
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 5.4
>EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle
protein protein.
Length = 138
Score = 25.8 bits (54), Expect = 0.33
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +3
Query: 228 SYFNNYQTNGKDSRSSSGNYRTIRGRKPLVS 320
+Y NN++T+ S SG + + P+VS
Sbjct: 41 NYINNFETSNGISHQESGQPKQVDNETPVVS 71
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.1
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 195 LKRSYHYLLSASYFNNYQTNGK 260
L +Y Y +Y NNY TN K
Sbjct: 85 LSNNYKYSNYNNYNNNYNTNYK 106
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.1
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 195 LKRSYHYLLSASYFNNYQTNGK 260
L +Y Y +Y NNY TN K
Sbjct: 85 LSNNYKYSNYNNYNNNYNTNYK 106
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.1
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 195 LKRSYHYLLSASYFNNYQTNGK 260
L +Y Y +Y NNY TN K
Sbjct: 85 LSNNYKYSNYNNYNNNYNTNYK 106
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.1
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 195 LKRSYHYLLSASYFNNYQTNGK 260
L +Y Y +Y NNY TN K
Sbjct: 85 LSNNYKYSNYNNYNNNYNTNYK 106
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.1
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 195 LKRSYHYLLSASYFNNYQTNGK 260
L +Y Y +Y NNY TN K
Sbjct: 85 LSNNYKYSNYNNYNNNYNTNYK 106
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.1
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 195 LKRSYHYLLSASYFNNYQTNGK 260
L +Y Y +Y NNY TN K
Sbjct: 85 LSNNYKYSNYNNYNNNYNTNYK 106
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.1
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 195 LKRSYHYLLSASYFNNYQTNGK 260
L +Y Y +Y NNY TN K
Sbjct: 85 LSNNYKYSNYNNYNNNYNTNYK 106
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.1
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 62 RLMLSERRPRMQTDFKSAAL 121
RL +RR RM+ D+K AL
Sbjct: 407 RLAEQDRRERMEFDWKQVAL 426
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 22.6 bits (46), Expect = 3.1
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +3
Query: 162 ANELKALASLYLKRSYHYLLSASYFNNYQTNGKDSRSSSGNYRTI 296
+ E K ++SL +Y Y +Y NNY + + + NY+ +
Sbjct: 309 SKEPKIISSL--SNNYKYSNYNNYNNNYNNYNNYNNNYNNNYKKL 351
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 5.4
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 212 LSPVGLLLQQLPDEREGF 265
LS LLLQ + ++REGF
Sbjct: 766 LSNGTLLLQHVKEDREGF 783
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 5.4
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 212 LSPVGLLLQQLPDEREGF 265
LS LLLQ + ++REGF
Sbjct: 762 LSNGTLLLQHVKEDREGF 779
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,910
Number of Sequences: 438
Number of extensions: 3447
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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