Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20105
         (628 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        28   0.28 
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    26   0.85 
AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    25   2.6  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    23   6.0  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   6.0  
AY187044-1|AAO39758.1|   87|Anopheles gambiae putative antennal ...    23   7.9  

>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 27.9 bits (59), Expect = 0.28
 Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
 Frame = +3

Query: 198 GSRNAGAERQTDSSTRSSRMRVERLRKDTVRIEEEKDSL--LSTLDSIKHSELLLDISEC 371
           GS+   +  +        +   ERLR+D  ++EE++     L   D IK  EL+    + 
Sbjct: 115 GSKKMTSTWENTVQNIRDKKEAERLRRDKAKVEEDQRHYRELKAADEIKRRELIQKAEDL 174

Query: 372 DKDDITRYADRILSRA 419
            + D  +   R+L  A
Sbjct: 175 IQKD--KVGPRVLESA 188


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 26.2 bits (55), Expect = 0.85
 Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 2/81 (2%)
 Frame = -3

Query: 623 GRLKVLCRCPRWGPAETCTRSYRSGNGNAHSLRRCARTYQLIDVHVHLIQSFLLLMVSVS 444
           GR +V+C   RW   +    S+RS   + +   +      L+D  V      +    +V 
Sbjct: 244 GRQRVICAGRRWITTQFHVDSFRSALEDVNFAEQATTHAGLVDAMVDACDIVMQRAPNVL 303

Query: 443 AHCH--LYGHSPGQDAVRVSC 387
            H H  +Y  +P  + +R  C
Sbjct: 304 QHQHRDVYWWAPVIEELRNEC 324


>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -3

Query: 488 VHLIQSFLLLMVSVSAHCHLY 426
           V LI   L  +VSV+A C+LY
Sbjct: 300 VDLINGILASLVSVTAGCYLY 320


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -1

Query: 181 GVVVNPLDTQSLMQID 134
           GVV+NPLD Q  +Q D
Sbjct: 492 GVVMNPLDAQCNVQRD 507


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +3

Query: 201 SRNAGAERQTDSSTRSSRMRVERLRKDTVRIEEEKD 308
           +R A  ER+ +   R  R R +R ++   + + EK+
Sbjct: 461 AREAAIEREKERELREQREREQREKEQREKEQREKE 496


>AY187044-1|AAO39758.1|   87|Anopheles gambiae putative antennal
           carrier protein AP-2 protein.
          Length = 87

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +3

Query: 303 KDSLLSTLDSIKHSELLLDISECDKDDIT 389
           KD+     D +K    L D  + DKD +T
Sbjct: 24  KDAAKDATDKVKDKAALPDAPKLDKDAVT 52


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,113
Number of Sequences: 2352
Number of extensions: 15312
Number of successful extensions: 25
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61050630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)