Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20105
(628 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF068719-7|AAO21425.1| 399|Caenorhabditis elegans Uncoordinated... 66 1e-11
AF068719-6|AAV58864.1| 457|Caenorhabditis elegans Uncoordinated... 66 1e-11
AF068719-5|AAC17781.1| 458|Caenorhabditis elegans Uncoordinated... 66 1e-11
S47168-2|AAB23866.2| 919|Caenorhabditis elegans UNC-5 protein. 33 0.17
S47168-1|AAB23867.2| 947|Caenorhabditis elegans UNC-5 protein. 33 0.17
AF036698-5|AAB88356.2| 567|Caenorhabditis elegans Uncoordinated... 33 0.17
AF036698-4|AAB88355.1| 919|Caenorhabditis elegans Uncoordinated... 33 0.17
Z98866-7|CAB11549.1| 454|Caenorhabditis elegans Hypothetical pr... 30 1.2
AY874872-1|AAX62733.1| 1668|Caenorhabditis elegans chitin syntha... 30 1.2
AF026210-2|AAB71283.2| 1668|Caenorhabditis elegans Chitin syntha... 30 1.2
AF047655-8|AAC04397.1| 227|Caenorhabditis elegans Hypothetical ... 30 1.6
U80027-18|AAC48115.1| 198|Caenorhabditis elegans Hypothetical p... 29 2.1
Z81556-9|CAB04522.1| 87|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z50872-7|CAJ55249.1| 1001|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z50872-6|CAH10768.1| 1039|Caenorhabditis elegans Hypothetical pr... 29 3.6
U41540-8|AAW30667.1| 571|Caenorhabditis elegans Hypothetical pr... 29 3.6
U41540-7|AAM54182.1| 930|Caenorhabditis elegans Hypothetical pr... 29 3.6
U41540-6|AAM54183.1| 934|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z75951-1|CAB00091.2| 408|Caenorhabditis elegans Hypothetical pr... 28 4.8
U80437-15|AAB37627.1| 445|Caenorhabditis elegans Mus (drosophil... 28 4.8
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 28 4.8
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 28 4.8
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 28 4.8
AL032632-15|CAA21593.1| 344|Caenorhabditis elegans Hypothetical... 28 4.8
AL022273-1|CAA18356.1| 344|Caenorhabditis elegans Hypothetical ... 28 4.8
Z81065-1|CAB02968.1| 399|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z50016-15|CAA90319.1| 329|Caenorhabditis elegans Hypothetical p... 28 6.3
AL032621-9|CAA21496.1| 329|Caenorhabditis elegans Hypothetical ... 28 6.3
Z81076-10|CAB03059.1| 394|Caenorhabditis elegans Hypothetical p... 27 8.3
U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical pr... 27 8.3
U20862-5|AAK29861.1| 483|Caenorhabditis elegans Hypothetical pr... 27 8.3
AL117204-2|CAB76734.1| 272|Caenorhabditis elegans Hypothetical ... 27 8.3
AL032631-1|CAB63336.1| 453|Caenorhabditis elegans Hypothetical ... 27 8.3
>AF068719-7|AAO21425.1| 399|Caenorhabditis elegans Uncoordinated
protein 23, isoform b protein.
Length = 399
Score = 66.5 bits (155), Expect = 1e-11
Identities = 29/84 (34%), Positives = 50/84 (59%)
Frame = +3
Query: 255 MRVERLRKDTVRIEEEKDSLLSTLDSIKHSELLLDISECDKDDITRYADRILSRAMTVEV 434
++VE+LRK +E EK+ +L +L I + + ECD+++I DR+ R TV+V
Sbjct: 239 LQVEQLRKKAAELEMEKEQILRSLGEISVHNCMFKLEECDREEIEAITDRLTKRTKTVQV 298
Query: 435 TVRTDRDHQQEEALYQVNMYIDQL 506
V T R+ +Q++AL + ID++
Sbjct: 299 VVETPRNEEQKKALEDATLMIDEV 322
>AF068719-6|AAV58864.1| 457|Caenorhabditis elegans Uncoordinated
protein 23, isoform c protein.
Length = 457
Score = 66.5 bits (155), Expect = 1e-11
Identities = 29/84 (34%), Positives = 50/84 (59%)
Frame = +3
Query: 255 MRVERLRKDTVRIEEEKDSLLSTLDSIKHSELLLDISECDKDDITRYADRILSRAMTVEV 434
++VE+LRK +E EK+ +L +L I + + ECD+++I DR+ R TV+V
Sbjct: 297 LQVEQLRKKAAELEMEKEQILRSLGEISVHNCMFKLEECDREEIEAITDRLTKRTKTVQV 356
Query: 435 TVRTDRDHQQEEALYQVNMYIDQL 506
V T R+ +Q++AL + ID++
Sbjct: 357 VVETPRNEEQKKALEDATLMIDEV 380
>AF068719-5|AAC17781.1| 458|Caenorhabditis elegans Uncoordinated
protein 23, isoform a protein.
Length = 458
Score = 66.5 bits (155), Expect = 1e-11
Identities = 29/84 (34%), Positives = 50/84 (59%)
Frame = +3
Query: 255 MRVERLRKDTVRIEEEKDSLLSTLDSIKHSELLLDISECDKDDITRYADRILSRAMTVEV 434
++VE+LRK +E EK+ +L +L I + + ECD+++I DR+ R TV+V
Sbjct: 298 LQVEQLRKKAAELEMEKEQILRSLGEISVHNCMFKLEECDREEIEAITDRLTKRTKTVQV 357
Query: 435 TVRTDRDHQQEEALYQVNMYIDQL 506
V T R+ +Q++AL + ID++
Sbjct: 358 VVETPRNEEQKKALEDATLMIDEV 381
>S47168-2|AAB23866.2| 919|Caenorhabditis elegans UNC-5 protein.
Length = 919
Score = 33.1 bits (72), Expect = 0.17
Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 10/81 (12%)
Frame = +2
Query: 386 HTIRGPHPVPGYDRRGDSAH*PRPSAGGSSVSG-EHVHRS--------AGMSVHNDAVSA 538
H IR PH V + RR + + P P G G E + RS G S +D +
Sbjct: 227 HRIRDPHDVLPHQRRTRTCNNPAPLNDGEYCKGEEEMTRSCKVPCKLDGGWSSWSDWSAC 286
Query: 539 HSRCQTY-MNACTSQPDPNAG 598
S C Y ACT P N G
Sbjct: 287 SSSCHRYRTRACTVPPPMNGG 307
>S47168-1|AAB23867.2| 947|Caenorhabditis elegans UNC-5 protein.
Length = 947
Score = 33.1 bits (72), Expect = 0.17
Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 10/81 (12%)
Frame = +2
Query: 386 HTIRGPHPVPGYDRRGDSAH*PRPSAGGSSVSG-EHVHRS--------AGMSVHNDAVSA 538
H IR PH V + RR + + P P G G E + RS G S +D +
Sbjct: 255 HRIRDPHDVLPHQRRTRTCNNPAPLNDGEYCKGEEEMTRSCKVPCKLDGGWSSWSDWSAC 314
Query: 539 HSRCQTY-MNACTSQPDPNAG 598
S C Y ACT P N G
Sbjct: 315 SSSCHRYRTRACTVPPPMNGG 335
>AF036698-5|AAB88356.2| 567|Caenorhabditis elegans Uncoordinated
protein 5, isoform b protein.
Length = 567
Score = 33.1 bits (72), Expect = 0.17
Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 10/81 (12%)
Frame = +2
Query: 386 HTIRGPHPVPGYDRRGDSAH*PRPSAGGSSVSG-EHVHRS--------AGMSVHNDAVSA 538
H IR PH V + RR + + P P G G E + RS G S +D +
Sbjct: 227 HRIRDPHDVLPHQRRTRTCNNPAPLNDGEYCKGEEEMTRSCKVPCKLDGGWSSWSDWSAC 286
Query: 539 HSRCQTY-MNACTSQPDPNAG 598
S C Y ACT P N G
Sbjct: 287 SSSCHRYRTRACTVPPPMNGG 307
>AF036698-4|AAB88355.1| 919|Caenorhabditis elegans Uncoordinated
protein 5, isoform a protein.
Length = 919
Score = 33.1 bits (72), Expect = 0.17
Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 10/81 (12%)
Frame = +2
Query: 386 HTIRGPHPVPGYDRRGDSAH*PRPSAGGSSVSG-EHVHRS--------AGMSVHNDAVSA 538
H IR PH V + RR + + P P G G E + RS G S +D +
Sbjct: 227 HRIRDPHDVLPHQRRTRTCNNPAPLNDGEYCKGEEEMTRSCKVPCKLDGGWSSWSDWSAC 286
Query: 539 HSRCQTY-MNACTSQPDPNAG 598
S C Y ACT P N G
Sbjct: 287 SSSCHRYRTRACTVPPPMNGG 307
>Z98866-7|CAB11549.1| 454|Caenorhabditis elegans Hypothetical
protein Y49E10.9 protein.
Length = 454
Score = 30.3 bits (65), Expect = 1.2
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Frame = +3
Query: 225 QTDSSTRSSRMR--VERLRKDTVR--IEEEKDSLL--STLDSIKHSELLLDISECDKDD- 383
+T ST S+M+ VE L+ + V I E ++ L T +I S+ + KD
Sbjct: 32 KTQPSTSKSKMKTAVENLKAEIVEDDINEAENRFLVDKTQQTISISQDFGVFEDIVKDST 91
Query: 384 ITRYADRILS-RAMTVEVTVRTDRDHQQEEALYQVN 488
+++Y DRIL+ + +TVE ++ +D Q L +VN
Sbjct: 92 VSKYCDRILTWKGITVE-EIKKKKDTLQGRILDKVN 126
>AY874872-1|AAX62733.1| 1668|Caenorhabditis elegans chitin synthase 2
protein.
Length = 1668
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Frame = +3
Query: 216 AERQTDSSTRSSRMRVERL--RKDTVR-IEEEKDSLLSTLDSIKHSEL 350
+E+ D + S+R +RL RK T+R +E +DSL TLD+ K E+
Sbjct: 1563 SEQTPDPAGFSARDNSKRLTLRKGTIRALEHRRDSLFGTLDNRKDDEV 1610
>AF026210-2|AAB71283.2| 1668|Caenorhabditis elegans Chitin synthase
protein 2 protein.
Length = 1668
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Frame = +3
Query: 216 AERQTDSSTRSSRMRVERL--RKDTVR-IEEEKDSLLSTLDSIKHSEL 350
+E+ D + S+R +RL RK T+R +E +DSL TLD+ K E+
Sbjct: 1563 SEQTPDPAGFSARDNSKRLTLRKGTIRALEHRRDSLFGTLDNRKDDEV 1610
>AF047655-8|AAC04397.1| 227|Caenorhabditis elegans Hypothetical
protein C17B7.3 protein.
Length = 227
Score = 29.9 bits (64), Expect = 1.6
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +3
Query: 276 KDTVRIEEEKDSLLSTLDSIKHSELLLDISECDKDDITRYADRILS-RAMTVEVTVRTDR 452
KDT E D++L L+ K +E ++ DKD++ + D S R+ +
Sbjct: 55 KDTNCTEGSLDAILCLLNLQKFAERSHELDMNDKDELKGFKDTCDSLRSCLANLKCSPVP 114
Query: 453 DHQQEEALYQVNMYIDQLV 509
Q+E AL + Y D +V
Sbjct: 115 KDQKEAALRSIEKYCDAVV 133
>U80027-18|AAC48115.1| 198|Caenorhabditis elegans Hypothetical
protein T28A11.3 protein.
Length = 198
Score = 29.5 bits (63), Expect = 2.1
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +3
Query: 276 KDTVRIEEEKDSLLSTLDSIKHSELLLDISECDKDDITRYADRILS-RAMTVEVTVRTDR 452
KDT E D++L L+ K +E ++ DKD++ + D S R+ +
Sbjct: 26 KDTNCTEGSLDAILCLLNLQKFAEKSDELDMNDKDELKGFKDTCDSLRSCLANLKCSPVP 85
Query: 453 DHQQEEALYQVNMYIDQLV 509
Q+E AL + Y D +V
Sbjct: 86 KDQKEAALRSIEKYCDAVV 104
>Z81556-9|CAB04522.1| 87|Caenorhabditis elegans Hypothetical
protein F58G1.9 protein.
Length = 87
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 309 SLLSTLDSIKHSELLLDISEC 371
++LSTLDS+ HSE L + +C
Sbjct: 16 AILSTLDSLLHSETALSVFDC 36
>Z50872-7|CAJ55249.1| 1001|Caenorhabditis elegans Hypothetical
protein C05D12.3c protein.
Length = 1001
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 455 PSAGGSSVSGEHVHRSAGMSVHNDAVSAHS 544
PS SSV G V+R MS H D ++A++
Sbjct: 246 PSGTDSSVDGVDVYRRLSMSTHGDYLNANN 275
>Z50872-6|CAH10768.1| 1039|Caenorhabditis elegans Hypothetical
protein C05D12.3a protein.
Length = 1039
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 455 PSAGGSSVSGEHVHRSAGMSVHNDAVSAHS 544
PS SSV G V+R MS H D ++A++
Sbjct: 246 PSGTDSSVDGVDVYRRLSMSTHGDYLNANN 275
>U41540-8|AAW30667.1| 571|Caenorhabditis elegans Hypothetical
protein F35H12.2c protein.
Length = 571
Score = 28.7 bits (61), Expect = 3.6
Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = +3
Query: 219 ERQTDSSTRSSRMRVERLRKDTVRIEEEKDSLLSTLDSIK-HSELLLDISECDKDDITRY 395
ER+ + + R + +T+R+E E D L L + K LD++E +
Sbjct: 325 ERENEDPVLRMEKEIGRHQANTLRLERENDDLAHELVTSKIELRRKLDVAEDQIETSANA 384
Query: 396 ADRILSRAMTV-EVTVRTDRDHQQEEALYQ 482
+R+ + M + E R+++Q + +Y+
Sbjct: 385 IERLTRQNMDILEENKNLMREYEQIKEMYR 414
>U41540-7|AAM54182.1| 930|Caenorhabditis elegans Hypothetical
protein F35H12.2a protein.
Length = 930
Score = 28.7 bits (61), Expect = 3.6
Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = +3
Query: 219 ERQTDSSTRSSRMRVERLRKDTVRIEEEKDSLLSTLDSIK-HSELLLDISECDKDDITRY 395
ER+ + + R + +T+R+E E D L L + K LD++E +
Sbjct: 684 ERENEDPVLRMEKEIGRHQANTLRLERENDDLAHELVTSKIELRRKLDVAEDQIETSANA 743
Query: 396 ADRILSRAMTV-EVTVRTDRDHQQEEALYQ 482
+R+ + M + E R+++Q + +Y+
Sbjct: 744 IERLTRQNMDILEENKNLMREYEQIKEMYR 773
>U41540-6|AAM54183.1| 934|Caenorhabditis elegans Hypothetical
protein F35H12.2b protein.
Length = 934
Score = 28.7 bits (61), Expect = 3.6
Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = +3
Query: 219 ERQTDSSTRSSRMRVERLRKDTVRIEEEKDSLLSTLDSIK-HSELLLDISECDKDDITRY 395
ER+ + + R + +T+R+E E D L L + K LD++E +
Sbjct: 688 ERENEDPVLRMEKEIGRHQANTLRLERENDDLAHELVTSKIELRRKLDVAEDQIETSANA 747
Query: 396 ADRILSRAMTV-EVTVRTDRDHQQEEALYQ 482
+R+ + M + E R+++Q + +Y+
Sbjct: 748 IERLTRQNMDILEENKNLMREYEQIKEMYR 777
>Z75951-1|CAB00091.2| 408|Caenorhabditis elegans Hypothetical
protein F14A5.1 protein.
Length = 408
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +3
Query: 141 CIRDCVSRGFTTTPHRRILGSRNAGAERQTDSSTRSSRMRVERLRKDTVRIEEEKDSLLS 320
CIR +S+ + + +R +R +S R ++ + R+ + V++++ S S
Sbjct: 119 CIRAGMSKDYIRRGNVDETKNRKTFRKRTIRNSIRRNKSSLNRI-SEPVKMDQNSTSRSS 177
Query: 321 TLDSIKHS 344
T SIKHS
Sbjct: 178 TSSSIKHS 185
>U80437-15|AAB37627.1| 445|Caenorhabditis elegans Mus (drosophila
mutagen sensitive)related protein 81, isoform a protein.
Length = 445
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +3
Query: 168 FTTTPHRRILGSRNAGAERQTDSSTRSSRMRVERLRKDTVRIEEEKDS 311
FTT +RR L +R + ER D + R+ ++ K V IE E +S
Sbjct: 98 FTTDDYRRFLTNRKSTTERMKD----AKRLEKQKSTKTIVDIENEFES 141
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 28.3 bits (60), Expect = 4.8
Identities = 24/102 (23%), Positives = 47/102 (46%), Gaps = 4/102 (3%)
Frame = +3
Query: 213 GAERQTDSSTRSSRMRVERLRKDTVRIEEEKDSLLSTLD---SIKHSELLLDISECDKDD 383
GA R +DS + + ++LR+D + E ++ L T+D H LL + +
Sbjct: 1846 GALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDIQSKTSHEYQLLKDQLLNTQN 1905
Query: 384 ITRYADRILSRAMTVEVTVRTD-RDHQQEEALYQVNMYIDQL 506
A+ + + VR++ RD++Q ++ VN + +L
Sbjct: 1906 ELNGANNRKQQLENELLNVRSEVRDYKQR--VHDVNNRVSEL 1945
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 28.3 bits (60), Expect = 4.8
Identities = 24/102 (23%), Positives = 47/102 (46%), Gaps = 4/102 (3%)
Frame = +3
Query: 213 GAERQTDSSTRSSRMRVERLRKDTVRIEEEKDSLLSTLD---SIKHSELLLDISECDKDD 383
GA R +DS + + ++LR+D + E ++ L T+D H LL + +
Sbjct: 1919 GALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDIQSKTSHEYQLLKDQLLNTQN 1978
Query: 384 ITRYADRILSRAMTVEVTVRTD-RDHQQEEALYQVNMYIDQL 506
A+ + + VR++ RD++Q ++ VN + +L
Sbjct: 1979 ELNGANNRKQQLENELLNVRSEVRDYKQR--VHDVNNRVSEL 2018
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 28.3 bits (60), Expect = 4.8
Identities = 24/102 (23%), Positives = 47/102 (46%), Gaps = 4/102 (3%)
Frame = +3
Query: 213 GAERQTDSSTRSSRMRVERLRKDTVRIEEEKDSLLSTLD---SIKHSELLLDISECDKDD 383
GA R +DS + + ++LR+D + E ++ L T+D H LL + +
Sbjct: 1919 GALRLSDSKVQDMKDDTDKLRRDLTKAESVENELRKTIDIQSKTSHEYQLLKDQLLNTQN 1978
Query: 384 ITRYADRILSRAMTVEVTVRTD-RDHQQEEALYQVNMYIDQL 506
A+ + + VR++ RD++Q ++ VN + +L
Sbjct: 1979 ELNGANNRKQQLENELLNVRSEVRDYKQR--VHDVNNRVSEL 2018
>AL032632-15|CAA21593.1| 344|Caenorhabditis elegans Hypothetical
protein H22D14.1 protein.
Length = 344
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +3
Query: 141 CIRDCVSRGFTTTPHRRILGSRNAGAERQTDSSTRSSRMRVERLRKDTVRIEEEKDSLLS 320
CIR +S+ + + +R +R +S R ++ + R+ + V++++ S S
Sbjct: 69 CIRAGMSKDYIRRGNVDETKNRKTFRKRTIRNSIRRNKSSLNRI-SEPVKMDQNSTSRSS 127
Query: 321 TLDSIKHS 344
T SIKHS
Sbjct: 128 TSSSIKHS 135
>AL022273-1|CAA18356.1| 344|Caenorhabditis elegans Hypothetical
protein H22D14.1 protein.
Length = 344
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +3
Query: 141 CIRDCVSRGFTTTPHRRILGSRNAGAERQTDSSTRSSRMRVERLRKDTVRIEEEKDSLLS 320
CIR +S+ + + +R +R +S R ++ + R+ + V++++ S S
Sbjct: 69 CIRAGMSKDYIRRGNVDETKNRKTFRKRTIRNSIRRNKSSLNRI-SEPVKMDQNSTSRSS 127
Query: 321 TLDSIKHS 344
T SIKHS
Sbjct: 128 TSSSIKHS 135
>Z81065-1|CAB02968.1| 399|Caenorhabditis elegans Hypothetical
protein F16C3.1 protein.
Length = 399
Score = 27.9 bits (59), Expect = 6.3
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = +3
Query: 156 VSRGFTTTPHRRILGSRNAGAERQTDSSTRSSRMRVERLRKDTVRIEEE--KDSLLSTLD 329
+ F+T +R+ + ++G R +++ + ++L DT++ EE K LLST +
Sbjct: 215 IVNSFSTYRYRQCMKIYSSGVLRVRFVRAPTTQQQQQQLNNDTIQFEETTVKKYLLSTDN 274
Query: 330 SIKHSELLLDISECDKDDITRYADRILSRAMTV 428
+ HS L ++ R +D LSR + +
Sbjct: 275 T--HSNLPTSSTQSRNCGKLRSSDLQLSRTLII 305
>Z50016-15|CAA90319.1| 329|Caenorhabditis elegans Hypothetical
protein Y45F3A.1 protein.
Length = 329
Score = 27.9 bits (59), Expect = 6.3
Identities = 22/81 (27%), Positives = 37/81 (45%)
Frame = +3
Query: 249 SRMRVERLRKDTVRIEEEKDSLLSTLDSIKHSELLLDISECDKDDITRYADRILSRAMTV 428
++ R+E R+ +RIE+ + L S K E LD K+ + R+ +M
Sbjct: 12 TQRRIEYTRQKVMRIEQMNEQLRKLSKSNKGREEKLDRLLKRKESLELDVARLTDASMRA 71
Query: 429 EVTVRTDRDHQQEEALYQVNM 491
E V + H EE + +V+M
Sbjct: 72 EPEVGAELLHSIEEPM-EVDM 91
>AL032621-9|CAA21496.1| 329|Caenorhabditis elegans Hypothetical
protein Y45F3A.1 protein.
Length = 329
Score = 27.9 bits (59), Expect = 6.3
Identities = 22/81 (27%), Positives = 37/81 (45%)
Frame = +3
Query: 249 SRMRVERLRKDTVRIEEEKDSLLSTLDSIKHSELLLDISECDKDDITRYADRILSRAMTV 428
++ R+E R+ +RIE+ + L S K E LD K+ + R+ +M
Sbjct: 12 TQRRIEYTRQKVMRIEQMNEQLRKLSKSNKGREEKLDRLLKRKESLELDVARLTDASMRA 71
Query: 429 EVTVRTDRDHQQEEALYQVNM 491
E V + H EE + +V+M
Sbjct: 72 EPEVGAELLHSIEEPM-EVDM 91
>Z81076-10|CAB03059.1| 394|Caenorhabditis elegans Hypothetical
protein F35C5.9 protein.
Length = 394
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = -3
Query: 512 TYQLIDVHVHLIQSFLLLMVSVSAHCHLYGHSPGQDAVRVSCDIVLI 372
+Y++I + +H I + LL ++ S + S G D R+ DIV +
Sbjct: 14 SYEIIRLQMHQILTLFLLALAASPSQAVTDRSCGSDLSRLWLDIVFV 60
>U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical
protein R02E12.4 protein.
Length = 639
Score = 27.5 bits (58), Expect = 8.3
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +3
Query: 183 HRRILGSRNAGAERQTDSSTRSSRMRVERLRKDTVR-IEEEKDSLLSTLD 329
H R +G + + R+ R+ + VE L KD+VR +E KD+L S ++
Sbjct: 458 HSRKIGQKLCQSIREMAHQLRTEAIAVEALLKDSVRNWQEWKDNLHSQVN 507
>U20862-5|AAK29861.1| 483|Caenorhabditis elegans Hypothetical
protein W06E11.1 protein.
Length = 483
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/84 (21%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Frame = +3
Query: 219 ERQTDSSTRSSRMRVERLRKDT---VRIE-EEKDSLLSTLDSIKHSELLLDISECDKDDI 386
ERQ S+ R +++ D +++ ++ D + +D I + LLLD E + I
Sbjct: 210 ERQKKRREASALHREKKIASDMWIPMKVHLKDGDPVAEKIDGISQNGLLLDDPEASRMSI 269
Query: 387 TRYADRILSRAMTVEVTVRTDRDH 458
+R + + E+ + + ++H
Sbjct: 270 RALVNRAIICGVKEELVIESGKEH 293
>AL117204-2|CAB76734.1| 272|Caenorhabditis elegans Hypothetical
protein Y116A8C.3 protein.
Length = 272
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 249 SRMRVERLRKDTVRIEEEKDSLLSTLDSIKHSELLLDISE 368
+R+ +E K ++ + DSL + LDS K +E L+D +
Sbjct: 71 ARLLIEIPGKTEAKLINDLDSLTTYLDSCKDAECLIDFQQ 110
>AL032631-1|CAB63336.1| 453|Caenorhabditis elegans Hypothetical
protein Y106G6H.1 protein.
Length = 453
Score = 27.5 bits (58), Expect = 8.3
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +3
Query: 141 CIRDCVSRGFTTTPHRRILGSRNAGAERQTDSSTRSSRMRVERLRKDTVRIEEEKDSL 314
C+R+ F TP R L S+ Q D+ + +V++ +KD +E EK +L
Sbjct: 393 CLRELCQEYFKDTPQTRWLCSQIPDRPEQADAFLNIRQTKVKKEKKD-YHMEFEKRNL 449
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,346,264
Number of Sequences: 27780
Number of extensions: 312885
Number of successful extensions: 1100
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1091
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -