Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20104
         (663 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    28   0.30 
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    26   0.92 
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    25   2.1  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    25   2.8  
DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     24   3.7  
AY146753-1|AAO12068.1|  311|Anopheles gambiae odorant-binding pr...    24   3.7  
AY146750-1|AAO12065.1|  311|Anopheles gambiae odorant-binding pr...    24   3.7  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   3.7  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    24   4.9  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          23   8.6  

>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 27.9 bits (59), Expect = 0.30
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 422 TDLSSPSTCTQNKRPEHTPLPSPV 493
           +D+SSP   T +  P+ TP P+PV
Sbjct: 168 SDMSSPGAPTGSSSPQITPRPTPV 191


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 26.2 bits (55), Expect = 0.92
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 154 HSCRHGGYYCHLRSGRGCPDCWCPP 228
           + C++G  Y ++ SG GC  C C P
Sbjct: 921 NECKNG--YWNIVSGNGCESCNCDP 943


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
 Frame = -2

Query: 410 TSAKIRIRIIPTNNLGC*AVPRT--PASPTMPMAKPAARPENPTAKPAPK 267
           TS   R  + P + L   A PR   P       +KP A P+  +A PAP+
Sbjct: 68  TSVDCRTSLAPCSKLFA-AEPRVALPKLSATGASKPIAEPKAASATPAPE 116


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 582 PKPYARWTRYRRRPSLCAS 526
           P P +RW R+RRR  L  S
Sbjct: 3   PLPQSRWWRWRRRHLLTGS 21


>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = -3

Query: 217 SNQDSHDQTVDGNNTRHDDRNDRLHDQLRPHH 122
           + ++S  Q+   N+   ++ +   H Q +PHH
Sbjct: 325 NKKNSQRQSAQANSGSSNNSSSHSHSQAQPHH 356


>AY146753-1|AAO12068.1|  311|Anopheles gambiae odorant-binding
           protein AgamOBP34 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 498 EPLCHYLSLKTRTGMVVAGSGSTLHRV 578
           E LC + S  TR+G+     G+ L R+
Sbjct: 198 ESLCFFYSFVTRSGLYSVEDGAKLERL 224


>AY146750-1|AAO12065.1|  311|Anopheles gambiae odorant-binding
           protein AgamOBP37 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 498 EPLCHYLSLKTRTGMVVAGSGSTLHRV 578
           E LC + S  TR+G+     G+ L R+
Sbjct: 198 ESLCFFYSFVTRSGLYSVEDGAKLERL 224


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 19/57 (33%), Positives = 22/57 (38%), Gaps = 5/57 (8%)
 Frame = -2

Query: 350 PRTPAS-----PTMPMAKPAARPENPTAKPAPKWMNPCKGGSWLAPGGHQQSGQPRP 195
           PR P++     P M    P  RP NP   P P+        S   P G    G PRP
Sbjct: 246 PRPPSAQGMQRPPMMGQPPPIRPPNPMGGPRPQISPQNSNLSGGMPSG--MVGPPRP 300


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -2

Query: 338 ASPTMPMAKPAARPENPTAKPAP 270
           A   M +  PAA    PTA P P
Sbjct: 67  AEAAMDLEPPAAAQPTPTASPVP 89


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -2

Query: 350  PRTPASPTMPMAKPAARPENPTAK 279
            PRTP   +   + PA  P++PT++
Sbjct: 1120 PRTPYGLSNGTSSPALPPKSPTSQ 1143


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 763,846
Number of Sequences: 2352
Number of extensions: 16703
Number of successful extensions: 84
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 84
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)