Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20104
(663 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical pr... 114 5e-26
AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h at... 114 5e-26
AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein ... 114 5e-26
AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein. 114 5e-26
Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical pr... 114 6e-26
AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein. 114 6e-26
Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical pr... 62 3e-10
AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein. 62 3e-10
Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical pr... 34 0.078
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 33 0.14
AC006689-3|AAO21400.1| 310|Caenorhabditis elegans Hypothetical ... 33 0.24
AC006689-2|AAF39970.2| 341|Caenorhabditis elegans Hypothetical ... 33 0.24
AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical ... 32 0.42
L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclas... 31 0.73
AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical ... 31 0.73
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 30 1.3
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 30 1.3
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 30 1.3
Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 29 2.2
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 29 2.2
U50312-9|AAA92325.1| 294|Caenorhabditis elegans Collagen protei... 29 2.2
U50312-7|AAA92323.2| 306|Caenorhabditis elegans Collagen protei... 29 2.2
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 29 2.2
AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical ... 29 2.2
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 29 2.2
Z72512-6|CAD44143.2| 657|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 29 2.9
U20864-7|AAK68357.1| 859|Caenorhabditis elegans Hypothetical pr... 29 2.9
U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 29 3.9
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 29 3.9
U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related... 29 3.9
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 29 3.9
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 29 3.9
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 28 5.1
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 28 5.1
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 28 5.1
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 28 5.1
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 28 5.1
AF039050-10|AAC47933.2| 362|Caenorhabditis elegans Seven tm rec... 28 5.1
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z74045-1|CAA98552.1| 535|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 28 6.8
U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter... 28 6.8
M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein ( C.ele... 28 6.8
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 28 6.8
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 28 6.8
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 28 6.8
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 28 6.8
AF101310-1|AAC69216.2| 765|Caenorhabditis elegans Hypothetical ... 27 9.0
>Z29095-3|CAA82355.1| 161|Caenorhabditis elegans Hypothetical
protein R10E11.2 protein.
Length = 161
Score = 114 bits (275), Expect = 5e-26
Identities = 57/83 (68%), Positives = 65/83 (78%), Gaps = 1/83 (1%)
Frame = +2
Query: 14 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 193
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 194 LVVAVLIAGAL-QEPANYPLYKG 259
LVVA+++ G + A Y L KG
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKG 95
Score = 109 bits (262), Expect = 2e-24
Identities = 52/65 (80%), Positives = 57/65 (87%)
Frame = +1
Query: 253 QGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLI 432
+GF HL AGL G GL AG+AIGIVGDAGVRGTAQQPRLFVGMILILIF+EVLGLYG+I
Sbjct: 94 KGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMI 153
Query: 433 VAIYL 447
VA+ L
Sbjct: 154 VALIL 158
Score = 33.9 bits (74), Expect = 0.10
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +1
Query: 259 FIHLGAGLAVGFS--GLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLI 432
F ++GA A F+ G A G A VG + +P L + ++ +I A ++G+YGL+
Sbjct: 17 FGYMGAASAQIFTVLGAAYGTAKSAVGICSMG--VMRPELIMKSVIPVIMAGIIGIYGLV 74
Query: 433 VAIYL 447
VA+ L
Sbjct: 75 VAMVL 79
Score = 31.5 bits (68), Expect = 0.55
Identities = 14/63 (22%), Positives = 30/63 (47%)
Frame = +2
Query: 26 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 205
F + A LGA Y G + +P L + I+ ++ + ++ +YG++VA
Sbjct: 96 FAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVA 155
Query: 206 VLI 214
+++
Sbjct: 156 LIL 158
>AC024762-4|AAF59473.1| 161|Caenorhabditis elegans Vacuolar h
atpase protein 3 protein.
Length = 161
Score = 114 bits (275), Expect = 5e-26
Identities = 57/83 (68%), Positives = 65/83 (78%), Gaps = 1/83 (1%)
Frame = +2
Query: 14 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 193
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 194 LVVAVLIAGAL-QEPANYPLYKG 259
LVVA+++ G + A Y L KG
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKG 95
Score = 109 bits (262), Expect = 2e-24
Identities = 52/65 (80%), Positives = 57/65 (87%)
Frame = +1
Query: 253 QGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLI 432
+GF HL AGL G GL AG+AIGIVGDAGVRGTAQQPRLFVGMILILIF+EVLGLYG+I
Sbjct: 94 KGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMI 153
Query: 433 VAIYL 447
VA+ L
Sbjct: 154 VALIL 158
Score = 33.9 bits (74), Expect = 0.10
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +1
Query: 259 FIHLGAGLAVGFS--GLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLI 432
F ++GA A F+ G A G A VG + +P L + ++ +I A ++G+YGL+
Sbjct: 17 FGYMGAASAQIFTVLGAAYGTAKSAVGICSMG--VMRPELIMKSVIPVIMAGIIGIYGLV 74
Query: 433 VAIYL 447
VA+ L
Sbjct: 75 VAMVL 79
Score = 31.5 bits (68), Expect = 0.55
Identities = 14/63 (22%), Positives = 30/63 (47%)
Frame = +2
Query: 26 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 205
F + A LGA Y G + +P L + I+ ++ + ++ +YG++VA
Sbjct: 96 FAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVA 155
Query: 206 VLI 214
+++
Sbjct: 156 LIL 158
>AB009566-1|BAA75066.1| 161|Caenorhabditis elegans Vha3 protein
protein.
Length = 161
Score = 114 bits (275), Expect = 5e-26
Identities = 57/83 (68%), Positives = 65/83 (78%), Gaps = 1/83 (1%)
Frame = +2
Query: 14 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 193
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 194 LVVAVLIAGAL-QEPANYPLYKG 259
LVVA+++ G + A Y L KG
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKG 95
Score = 109 bits (262), Expect = 2e-24
Identities = 52/65 (80%), Positives = 57/65 (87%)
Frame = +1
Query: 253 QGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLI 432
+GF HL AGL G GL AG+AIGIVGDAGVRGTAQQPRLFVGMILILIF+EVLGLYG+I
Sbjct: 94 KGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMI 153
Query: 433 VAIYL 447
VA+ L
Sbjct: 154 VALIL 158
Score = 33.9 bits (74), Expect = 0.10
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +1
Query: 259 FIHLGAGLAVGFS--GLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLI 432
F ++GA A F+ G A G A VG + +P L + ++ +I A ++G+YGL+
Sbjct: 17 FGYMGAASAQIFTVLGAAYGTAKSAVGICSMG--VMRPELIMKSVIPVIMAGIIGIYGLV 74
Query: 433 VAIYL 447
VA+ L
Sbjct: 75 VAMVL 79
Score = 31.5 bits (68), Expect = 0.55
Identities = 14/63 (22%), Positives = 30/63 (47%)
Frame = +2
Query: 26 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 205
F + A LGA Y G + +P L + I+ ++ + ++ +YG++VA
Sbjct: 96 FAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVA 155
Query: 206 VLI 214
+++
Sbjct: 156 LIL 158
>AB000918-1|BAA22596.1| 161|Caenorhabditis elegans VHA-2 protein.
Length = 161
Score = 114 bits (275), Expect = 5e-26
Identities = 57/83 (68%), Positives = 65/83 (78%), Gaps = 1/83 (1%)
Frame = +2
Query: 14 YGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYG 193
Y PFFG MGAASA IF+ LGAAYGTAKS GI +M VMRPELIMKS+IPV+MAGII IYG
Sbjct: 13 YAPFFGYMGAASAQIFTVLGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYG 72
Query: 194 LVVAVLIAGAL-QEPANYPLYKG 259
LVVA+++ G + A Y L KG
Sbjct: 73 LVVAMVLKGKVTSASAGYDLNKG 95
Score = 109 bits (262), Expect = 2e-24
Identities = 52/65 (80%), Positives = 57/65 (87%)
Frame = +1
Query: 253 QGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLI 432
+GF HL AGL G GL AG+AIGIVGDAGVRGTAQQPRLFVGMILILIF+EVLGLYG+I
Sbjct: 94 KGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMI 153
Query: 433 VAIYL 447
VA+ L
Sbjct: 154 VALIL 158
Score = 33.9 bits (74), Expect = 0.10
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +1
Query: 259 FIHLGAGLAVGFS--GLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLI 432
F ++GA A F+ G A G A VG + +P L + ++ +I A ++G+YGL+
Sbjct: 17 FGYMGAASAQIFTVLGAAYGTAKSAVGICSMG--VMRPELIMKSVIPVIMAGIIGIYGLV 74
Query: 433 VAIYL 447
VA+ L
Sbjct: 75 VAMVL 79
Score = 31.5 bits (68), Expect = 0.55
Identities = 14/63 (22%), Positives = 30/63 (47%)
Frame = +2
Query: 26 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVA 205
F + A LGA Y G + +P L + I+ ++ + ++ +YG++VA
Sbjct: 96 FAHLAAGLTCGLCGLGAGYAIGIVGDAGVRGTAQQPRLFVGMILILIFSEVLGLYGMIVA 155
Query: 206 VLI 214
+++
Sbjct: 156 LIL 158
>Z29095-6|CAA82354.1| 169|Caenorhabditis elegans Hypothetical
protein R10E11.8 protein.
Length = 169
Score = 114 bits (274), Expect = 6e-26
Identities = 52/81 (64%), Positives = 70/81 (86%), Gaps = 1/81 (1%)
Frame = +2
Query: 11 IYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIY 190
+YGPFFG +G SA+ F+A G+AYGTAK+GTGIA+M+V RP+L+MK+IIPVVMAGI+AIY
Sbjct: 20 MYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIY 79
Query: 191 GLVVAVLIAGALQEP-ANYPL 250
GLVVAV+++G ++ ANY +
Sbjct: 80 GLVVAVIVSGKVEPAGANYTI 100
Score = 92.7 bits (220), Expect = 2e-19
Identities = 44/63 (69%), Positives = 49/63 (77%)
Frame = +1
Query: 259 FIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVA 438
F GL G GL AG+AIGI GDAGVR +QQPR+FVGMILILIFAEVLGLYG+IVA
Sbjct: 104 FSQFAGGLVCGLCGLGAGYAIGIAGDAGVRALSQQPRMFVGMILILIFAEVLGLYGMIVA 163
Query: 439 IYL 447
+ L
Sbjct: 164 LIL 166
Score = 34.7 bits (76), Expect = 0.059
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +2
Query: 68 LGAAYGTAKSG-TGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGA 223
LGA Y +G G+ A+S +P + + I+ ++ A ++ +YG++VA LI GA
Sbjct: 118 LGAGYAIGIAGDAGVRALS-QQPRMFVGMILILIFAEVLGLYGMIVA-LILGA 168
>AB000917-1|BAA22595.1| 169|Caenorhabditis elegans VHA-1 protein.
Length = 169
Score = 114 bits (274), Expect = 6e-26
Identities = 52/81 (64%), Positives = 70/81 (86%), Gaps = 1/81 (1%)
Frame = +2
Query: 11 IYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIY 190
+YGPFFG +G SA+ F+A G+AYGTAK+GTGIA+M+V RP+L+MK+IIPVVMAGI+AIY
Sbjct: 20 MYGPFFGSLGVTSAMAFAAAGSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIY 79
Query: 191 GLVVAVLIAGALQEP-ANYPL 250
GLVVAV+++G ++ ANY +
Sbjct: 80 GLVVAVIVSGKVEPAGANYTI 100
Score = 92.7 bits (220), Expect = 2e-19
Identities = 44/63 (69%), Positives = 49/63 (77%)
Frame = +1
Query: 259 FIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIVA 438
F GL G GL AG+AIGI GDAGVR +QQPR+FVGMILILIFAEVLGLYG+IVA
Sbjct: 104 FSQFAGGLVCGLCGLGAGYAIGIAGDAGVRALSQQPRMFVGMILILIFAEVLGLYGMIVA 163
Query: 439 IYL 447
+ L
Sbjct: 164 LIL 166
Score = 34.7 bits (76), Expect = 0.059
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +2
Query: 68 LGAAYGTAKSG-TGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGA 223
LGA Y +G G+ A+S +P + + I+ ++ A ++ +YG++VA LI GA
Sbjct: 118 LGAGYAIGIAGDAGVRALS-QQPRMFVGMILILIFAEVLGLYGMIVA-LILGA 168
>Z68317-1|CAA92686.1| 214|Caenorhabditis elegans Hypothetical
protein T01H3.1 protein.
Length = 214
Score = 62.5 bits (145), Expect = 3e-10
Identities = 28/62 (45%), Positives = 38/62 (61%)
Frame = +1
Query: 256 GFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIV 435
G++ G GL VG S L G A+GIVG A P LFV +++I IFA +GL+G+I+
Sbjct: 142 GYMIFGGGLTVGLSNLVCGLAVGIVGSGAAIADAANPALFVKILIIEIFASAIGLFGMII 201
Query: 436 AI 441
I
Sbjct: 202 GI 203
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/66 (27%), Positives = 36/66 (54%)
Frame = +2
Query: 35 MGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLI 214
+G ++ S LGA +G +G+ I V P + K+++ ++ +AI+G+++A +
Sbjct: 54 LGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGIIMAFVF 113
Query: 215 AGALQE 232
G L E
Sbjct: 114 VGKLAE 119
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Frame = +1
Query: 265 HLGAGLAVGFS----GLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLI 432
H+ AGL +GFS L AG+ I G + + G + PR+ ++ +IF E + ++G+I
Sbjct: 49 HMWAGLGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGII 108
Query: 433 VA 438
+A
Sbjct: 109 MA 110
>AB000919-1|BAA22597.1| 214|Caenorhabditis elegans VHA-4 protein.
Length = 214
Score = 62.5 bits (145), Expect = 3e-10
Identities = 28/62 (45%), Positives = 38/62 (61%)
Frame = +1
Query: 256 GFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLIV 435
G++ G GL VG S L G A+GIVG A P LFV +++I IFA +GL+G+I+
Sbjct: 142 GYMIFGGGLTVGLSNLVCGLAVGIVGSGAAIADAANPALFVKILIIEIFASAIGLFGMII 201
Query: 436 AI 441
I
Sbjct: 202 GI 203
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/66 (27%), Positives = 36/66 (54%)
Frame = +2
Query: 35 MGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLI 214
+G ++ S LGA +G +G+ I V P + K+++ ++ +AI+G+++A +
Sbjct: 54 LGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGIIMAFVF 113
Query: 215 AGALQE 232
G L E
Sbjct: 114 VGKLAE 119
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Frame = +1
Query: 265 HLGAGLAVGFS----GLAAGFAIGIVGDAGVRGTAQQPRLFVGMILILIFAEVLGLYGLI 432
H+ AGL +GFS L AG+ I G + + G + PR+ ++ +IF E + ++G+I
Sbjct: 49 HMWAGLGIGFSLSLSVLGAGWGIFTTGSSILGGGVKAPRIRTKNLVSIIFCEAVAIFGII 108
Query: 433 VA 438
+A
Sbjct: 109 MA 110
>Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical
protein C15A11.1 protein.
Length = 303
Score = 34.3 bits (75), Expect = 0.078
Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Frame = -2
Query: 350 PRTPASPTMPMAKPAARPENPTAKPAPKWMNPCKG--GSWLAPGGHQQSGQPRPDRRWQ* 177
P P P P + AA PE+P P P G G+ APGG G P D +
Sbjct: 187 PAGPPGPAGPAGEDAAAPESPPGPPGPPGPPGKDGEAGAPGAPGGPGTDGAPGVDAAYCP 246
Query: 176 YPP 168
PP
Sbjct: 247 CPP 249
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 33.5 bits (73), Expect = 0.14
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 148 VDHSCRHGGYYCHLRSGRGCPDCWCPPG 231
V H C +GG+ + S R P C CP G
Sbjct: 1800 VGHECLNGGFCSYANSNRSLPHCICPSG 1827
>AC006689-3|AAO21400.1| 310|Caenorhabditis elegans Hypothetical
protein T22E7.1b protein.
Length = 310
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -3
Query: 256 LVKGVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDR 149
++ GVVG +G+ D H+ T G N+ HD + D+
Sbjct: 9 VIIGVVGAYAQGSCRTDQHEMTCRGKNSLHDLKKDQ 44
>AC006689-2|AAF39970.2| 341|Caenorhabditis elegans Hypothetical
protein T22E7.1a protein.
Length = 341
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -3
Query: 256 LVKGVVGWLLEGTSNQDSHDQTVDGNNTRHDDRNDR 149
++ GVVG +G+ D H+ T G N+ HD + D+
Sbjct: 9 VIIGVVGAYAQGSCRTDQHEMTCRGKNSLHDLKKDQ 44
>AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical
protein T01A4.1a protein.
Length = 1217
Score = 31.9 bits (69), Expect = 0.42
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = -1
Query: 447 QVDGDDKSVKTQYFSENKNKNHSDE*PR---LLSSTTHACISHDAYGETGSQTRE 292
++DG++ K + K KNH+D P LL ST+ + ++ D + TR+
Sbjct: 511 ELDGEESQKKNEKKKAKKRKNHNDYLPESDPLLRSTSRSSVNSDKRSSSSGTTRK 565
>L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclase
protein.
Length = 1276
Score = 31.1 bits (67), Expect = 0.73
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -1
Query: 447 QVDGDDKSVKTQYFSENKNKNHSDE*PR---LLSSTTHACISHDAYGE 313
++DG++ K + K KNH+D P LL ST+ + ++ D + E
Sbjct: 557 ELDGEESQKKNEKKKAKKRKNHNDYLPESDPLLRSTSRSSVNSDKFDE 604
>AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical
protein T01A4.1c protein.
Length = 1276
Score = 31.1 bits (67), Expect = 0.73
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -1
Query: 447 QVDGDDKSVKTQYFSENKNKNHSDE*PR---LLSSTTHACISHDAYGE 313
++DG++ K + K KNH+D P LL ST+ + ++ D + E
Sbjct: 557 ELDGEESQKKNEKKKAKKRKNHNDYLPESDPLLRSTSRSSVNSDKFDE 604
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/67 (32%), Positives = 24/67 (35%), Gaps = 4/67 (5%)
Frame = -2
Query: 356 AVPRTPASPTMPMAKPAAR----PENPTAKPAPKWMNPCKGGSWLAPGGHQQSGQPRPDR 189
A P P P P P P P P P NP G+ PGG Q G P D
Sbjct: 174 AGPAGPPGPPGPDGAPGGGSGPGPAGPAGPPGPDG-NPGSAGADGQPGGPGQDGAPGSDA 232
Query: 188 RWQ*YPP 168
+ PP
Sbjct: 233 AYCPCPP 239
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/67 (32%), Positives = 24/67 (35%), Gaps = 4/67 (5%)
Frame = -2
Query: 356 AVPRTPASPTMPMAKPAAR----PENPTAKPAPKWMNPCKGGSWLAPGGHQQSGQPRPDR 189
A P P P P P P P P P NP G+ PGG Q G P D
Sbjct: 174 AGPAGPPGPPGPDGAPGGGSGPGPAGPAGPPGPDG-NPGSAGADGQPGGPGQDGAPGSDA 232
Query: 188 RWQ*YPP 168
+ PP
Sbjct: 233 AYCPCPP 239
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/60 (28%), Positives = 22/60 (36%)
Frame = -2
Query: 347 RTPASPTMPMAKPAARPENPTAKPAPKWMNPCKGGSWLAPGGHQQSGQPRPDRRWQ*YPP 168
R P++P P A P P P P + PGG Q P ++ Q Y P
Sbjct: 591 RPPSTPQAPQAPPVQAAPAPVQAPQAPQAPPQAYQGYGGPGGPPQQAYRYPPQQGQQYSP 650
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/60 (28%), Positives = 22/60 (36%)
Frame = -2
Query: 347 RTPASPTMPMAKPAARPENPTAKPAPKWMNPCKGGSWLAPGGHQQSGQPRPDRRWQ*YPP 168
R P++P P A P P P P + PGG Q P ++ Q Y P
Sbjct: 591 RPPSTPQAPQAPPVQAAPAPVQAPQAPQAPPQAYQGYGGPGGPPQQAYRYPPQQGQQYSP 650
>Z81135-4|CAB03457.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -2
Query: 347 RTPASPTMPMAKPAARPENPTAKPAPK 267
+TPA PT +AKPA +P P + PAPK
Sbjct: 47 KTPARPT--VAKPAPKP-TPKSAPAPK 70
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -2
Query: 350 PRTPASPTMPMAKPAARPENPTAKPAPKWMNPCKGGSWLAPGGHQQSGQP-RP 195
P TP +P P P P KP P+ P G APG ++G P RP
Sbjct: 125 PGTPGTPGKPPVAPCEPTTPPPCKPCPQG-PPGPPGPPGAPGDPGEAGTPGRP 176
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -2
Query: 350 PRTPASPTMPMAKPAARPENPTAKPAPKWMNPCKGGSWLAPGGHQQSGQP-RP 195
P TP +P P P P KP P+ P G APG ++G P RP
Sbjct: 120 PGTPGTPGKPPVAPCEPTTPPPCKPCPQG-PPGPPGPPGAPGDPGEAGTPGRP 171
>U50312-9|AAA92325.1| 294|Caenorhabditis elegans Collagen protein
10 protein.
Length = 294
Score = 29.5 bits (63), Expect = 2.2
Identities = 26/76 (34%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Frame = -2
Query: 413 NTSAKIRIRIIPTNNLGC*AVPRTPASPTMPMAKPAARPENPTAKP-AP-KWMNPCKGGS 240
NT+ + P + C P PA P P PA P P +P AP NP G
Sbjct: 128 NTATFAPLTCAPVSQ-DCVKCPEGPAGPAGPEG-PAG-PAGPDGQPGAPGNAGNPGSDGQ 184
Query: 239 WLAPGGHQQSGQPRPD 192
APG + Q G P D
Sbjct: 185 PGAPGDNGQDGAPGQD 200
>U50312-7|AAA92323.2| 306|Caenorhabditis elegans Collagen protein
144 protein.
Length = 306
Score = 29.5 bits (63), Expect = 2.2
Identities = 26/76 (34%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Frame = -2
Query: 413 NTSAKIRIRIIPTNNLGC*AVPRTPASPTMPMAKPAARPENPTAKP-AP-KWMNPCKGGS 240
NT+ + P + C P PA P P PA P P +P AP NP G
Sbjct: 140 NTATFAPLTCAPVSQ-DCVKCPEGPAGPAGPEG-PAG-PAGPDGQPGAPGNAGNPGSDGQ 196
Query: 239 WLAPGGHQQSGQPRPD 192
APG + Q G P D
Sbjct: 197 PGAPGDNGQDGAPGQD 212
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -2
Query: 350 PRTPASPTMPMAKPAARPENPTAKPAPKWMNPCKGGSWLAPGGHQQSGQP-RP 195
P TP +P P P P KP P+ P G APG ++G P RP
Sbjct: 120 PGTPGTPGKPPVAPCEPTTPPPCKPCPQG-PPGPPGPPGAPGDPGEAGTPGRP 171
>AL032634-4|CAA21599.1| 500|Caenorhabditis elegans Hypothetical
protein W01G7.5 protein.
Length = 500
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -2
Query: 347 RTPASPTMPMAKPAARPENPTAKPAPK 267
+TPA PT +AKPA +P P + PAPK
Sbjct: 47 KTPARPT--VAKPAPKP-TPKSAPAPK 70
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = -2
Query: 350 PRTPASPTMPMAKPAARPEN--PTAKPAPKWMNPCKGG 243
P PA P+MP + A+PE P P P P G
Sbjct: 562 PSEPAKPSMPSGESPAQPEPSIPAVNPEPSPSQPSSSG 599
>Z72512-6|CAD44143.2| 657|Caenorhabditis elegans Hypothetical
protein R07B5.9 protein.
Length = 657
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = +2
Query: 422 TDLSSPSTCTQNKRPEHTPLPSP---VLRASMSLSESEDAH 535
TD + P+ + + P H+P PSP +++A ++ + D H
Sbjct: 234 TDYNIPTPDSYHSSPPHSPTPSPQPQLMQAQQNIYQDNDCH 274
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = -2
Query: 323 PMAKPAARPENPTAKPAPKWMNPCKGGSWLAPGGHQQSGQPRPDRRWQ*YP 171
P P RP+ P +P P GG +P G++ QP P + Q YP
Sbjct: 117 PQPPPCQRPQPPQPQPQPYPQR--TGGCLPSPRGYENQPQP-PQPQQQQYP 164
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = -2
Query: 323 PMAKPAARPENPTAKPAPKWMNPCKGGSWLAPGGHQQSGQPRPDRRWQ*YP 171
P P RP+ P +P P GG +P G++ QP P + Q YP
Sbjct: 117 PQPPPCQRPQPPQPQPQPYPQR--TGGCLPSPRGYENQPQP-PQPQQQQYP 164
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = -2
Query: 323 PMAKPAARPENPTAKPAPKWMNPCKGGSWLAPGGHQQSGQPRPDRRWQ*YP 171
P P RP+ P +P P GG +P G++ QP P + Q YP
Sbjct: 117 PQPPPCQRPQPPQPQPQPYPQR--TGGCLPSPRGYENQPQP-PQPQQQQYP 164
>U20864-7|AAK68357.1| 859|Caenorhabditis elegans Hypothetical
protein F32A5.2b protein.
Length = 859
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -2
Query: 419 RPNTSAKIRIRIIPTNNLGC*AVPRTPASPTMPMAKPAARPENPTAKP 276
RP T A R+R P L PR P T A P +RP T +P
Sbjct: 82 RPATKAPNRMRRPPPRKLA--QTPRPPVVTTQRPAPPQSRPPPVTRRP 127
>U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical
protein F32A5.2a protein.
Length = 1000
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -2
Query: 419 RPNTSAKIRIRIIPTNNLGC*AVPRTPASPTMPMAKPAARPENPTAKP 276
RP T A R+R P L PR P T A P +RP T +P
Sbjct: 82 RPATKAPNRMRRPPPRKLA--QTPRPPVVTTQRPAPPQSRPPPVTRRP 127
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 178 YCHLRSGRGCPDCWCPPGASQ 240
Y ++ SG GC DC C P S+
Sbjct: 1074 YFNITSGDGCEDCGCDPTGSE 1094
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 353 VPRTPASPTMPMAKPAARPENPTAKPAPK 267
VP P PT P +P RPE P +P P+
Sbjct: 96 VPPPPPPPTQPEPEPEPRPE-PQPEPQPE 123
>U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related.
see also lmb-protein 2 protein.
Length = 1535
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 160 CRHGGYYCHLRSGRGCPDCWCPPGASQ 240
C HG Y ++ SG GC +C C P S+
Sbjct: 915 CAHGFY--NITSGLGCQECNCDPLGSE 939
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 178 YCHLRSGRGCPDCWCPPGASQ 240
Y ++ SG GC DC C P S+
Sbjct: 1074 YFNITSGDGCEDCGCDPTGSE 1094
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 178 YCHLRSGRGCPDCWCPPGASQ 240
Y ++ SG GC DC C P S+
Sbjct: 1074 YFNITSGDGCEDCGCDPTGSE 1094
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -2
Query: 350 PRTPASPTMPMAKPAARPENPTAKPAPKWMNPCKGGSWLAPG 225
P P +P +P P P+ P P PC G APG
Sbjct: 117 PGKPGAPGLP-GNPGRPPQQPCEPITPPPCKPCPAGPAGAPG 157
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -2
Query: 350 PRTPASPTMPMAKPAARPENPTAKPAPKWMNPCKGGSWLAPG 225
P P +P +P P P+ P P PC G APG
Sbjct: 117 PGKPGAPGLP-GNPGRPPQQPCEPITPPPCKPCPAGPAGAPG 157
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -2
Query: 350 PRTPASPTMPMAKPAARPENPTAKPAPKWMNPCKGGSWLAPG 225
P P +P +P P P+ P P PC G APG
Sbjct: 117 PGKPGAPGLP-GNPGRPPQQPCEPITPPPCKPCPAGPAGAPG 157
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -2
Query: 350 PRTPASPTMPMAKPAARPENPTAKPAPKWMNPCKGGSWLAPG 225
P P +P +P P P+ P P PC G APG
Sbjct: 117 PGKPGAPGLP-GNPGRPPQQPCEPITPPPCKPCPAGPAGAPG 157
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -2
Query: 350 PRTPASPTMPMAKPAARPENPTAKPAPKWMNPCKGGSWLAPG 225
P P +P +P P P+ P P PC G APG
Sbjct: 117 PGKPGAPGLP-GNPGRPPQQPCEPITPPPCKPCPAGPAGAPG 157
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -2
Query: 350 PRTPASPTMPMAKPAARPENPTAKPAPK 267
P P +P P AKP RP + PA K
Sbjct: 639 PTGPPAPPKPPAKPRGRPPRKSISPAVK 666
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -2
Query: 350 PRTPASPTMPMAKPAARPENPTAKPAPK 267
P P +P P AKP RP + PA K
Sbjct: 639 PTGPPAPPKPPAKPRGRPPRKSISPAVK 666
>AF039050-10|AAC47933.2| 362|Caenorhabditis elegans Seven tm
receptor protein 82 protein.
Length = 362
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 128 RPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALQEPANYPLY 253
RPE ++ +VMA + AIY + +++ L NY LY
Sbjct: 35 RPEYGSYKLLMMVMATLYAIYSAIEVIILPSYLVFEYNYLLY 76
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical protein
W01F3.3 protein.
Length = 2175
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Frame = +1
Query: 181 CHLRSGR-GCPDCWCPPGASQLPP 249
C L + R GCP C CPP PP
Sbjct: 933 CQLVNDRSGCPFCSCPPVKQASPP 956
>Z74045-1|CAA98552.1| 535|Caenorhabditis elegans Hypothetical
protein T27F2.1 protein.
Length = 535
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -2
Query: 353 VPRTPASPTMPMAKPAARPENPTAKPAPKWMNPCKGGSWLAPGG 222
+PR P SP P+ + P TAK W P +W P G
Sbjct: 221 IPRAPPSPPAPVMH--SPPRKMTAKDQNDWKIPPCISNWKNPKG 262
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
F25H8.3 protein.
Length = 2165
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/49 (24%), Positives = 27/49 (55%)
Frame = -1
Query: 534 CASSDSDNDIEARSTGDGSGVCSGRLFCVQVDGDDKSVKTQYFSENKNK 388
C++ D+ + S GSG R+ CV+++GD ++ +++ + +K
Sbjct: 958 CSTRWITEDVSSCSAKCGSGQKRQRVSCVKMEGDRQTPASEHLCDRNSK 1006
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/49 (24%), Positives = 27/49 (55%)
Frame = -1
Query: 534 CASSDSDNDIEARSTGDGSGVCSGRLFCVQVDGDDKSVKTQYFSENKNK 388
C++ D+ + S GSG R+ CV+++GD ++ +++ + +K
Sbjct: 958 CSTRWITEDVSSCSAKCGSGQKRQRVSCVKMEGDRQTPASEHLCDRNSK 1006
>U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 13 protein.
Length = 302
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
Frame = -2
Query: 350 PRTPASPTMPMAKPAARPENPTAKPAPKWMNPCKGGSWLAPG--GHQ----QSGQP 201
P P +P P P P+ P + P PC G APG G Q ++GQP
Sbjct: 120 PGKPGAPGFP-GNPGKAPQKPCEEITPPPCKPCPQGPPGAPGLPGDQGDKGEAGQP 174
>M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein (
C.elegans collagen (dpy-13) gene, complete cds. ).
Length = 302
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
Frame = -2
Query: 350 PRTPASPTMPMAKPAARPENPTAKPAPKWMNPCKGGSWLAPG--GHQ----QSGQP 201
P P +P P P P+ P + P PC G APG G Q ++GQP
Sbjct: 120 PGKPGAPGFP-GNPGKAPQKPCEEITPPPCKPCPQGPPGAPGLPGDQGDKGEAGQP 174
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -2
Query: 350 PRTPASPTM--PMAKPAARPENPTAKPAPK 267
PRTP +P + P +P A P A+P P+
Sbjct: 484 PRTPKTPAVVEPEPEPVAEEPEPVAEPEPE 513
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -2
Query: 350 PRTPASPTM--PMAKPAARPENPTAKPAPK 267
PRTP +P + P +P A P A+P P+
Sbjct: 434 PRTPKTPAVVEPEPEPVAEEPEPVAEPEPE 463
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -2
Query: 350 PRTPASPTM--PMAKPAARPENPTAKPAPK 267
PRTP +P + P +P A P A+P P+
Sbjct: 484 PRTPKTPAVVEPEPEPVAEEPEPVAEPEPE 513
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = -2
Query: 350 PRTPASPTM--PMAKPAARPENPTAKPAPK 267
PRTP +P + P +P A P A+P P+
Sbjct: 484 PRTPKTPAVVEPEPEPVAEEPEPVAEPEPE 513
>AF101310-1|AAC69216.2| 765|Caenorhabditis elegans Hypothetical
protein C39F7.2 protein.
Length = 765
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -1
Query: 525 SDSDNDIEARSTGDGSGVCSGRLFCVQVDGDDKSVKTQYFSE 400
S + + I +S G SG CV +GD +S K SE
Sbjct: 62 SSASSPISPQSAGSSSGASDTMSLCVSDNGDHESDKLSVVSE 103
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,438,956
Number of Sequences: 27780
Number of extensions: 383728
Number of successful extensions: 1695
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 1422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1679
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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