Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20101
         (590 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6BSP2 Cluster: Similar to CA3384|IPF8362 Candida albic...    36   0.71 
UniRef50_Q8D3H5 Cluster: Yb1688 protein; n=1; Wigglesworthia glo...    33   5.0  
UniRef50_Q2FQS8 Cluster: Putative uncharacterized protein; n=1; ...    32   8.7  

>UniRef50_Q6BSP2 Cluster: Similar to CA3384|IPF8362 Candida albicans
           IPF8362; n=1; Debaryomyces hansenii|Rep: Similar to
           CA3384|IPF8362 Candida albicans IPF8362 - Debaryomyces
           hansenii (Yeast) (Torulaspora hansenii)
          Length = 959

 Score = 35.9 bits (79), Expect = 0.71
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = +2

Query: 14  VTRVFDNRVYARSWNHVPNKILKSTSFYTRWIGNEL 121
           +TR  D  +YA SWNH  +  L S SF +   GN L
Sbjct: 163 ITRRLDKIIYAPSWNHSKDSFLNSASFLSSSSGNPL 198


>UniRef50_Q8D3H5 Cluster: Yb1688 protein; n=1; Wigglesworthia
           glossinidia endosymbiont of Glossina brevipalpis|Rep:
           Yb1688 protein - Wigglesworthia glossinidia brevipalpis
          Length = 356

 Score = 33.1 bits (72), Expect = 5.0
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = -1

Query: 317 NITLIFGLIIRACFYNITYLYYLYLQSNAISKFLTT*LFYI 195
           N+TLI+ L    C   + +  +LY + N I+KF+   ++YI
Sbjct: 157 NLTLIWNLFFN-CLLTVLFSIFLYFKGNYINKFIKIFIYYI 196


>UniRef50_Q2FQS8 Cluster: Putative uncharacterized protein; n=1;
           Methanospirillum hungatei JF-1|Rep: Putative
           uncharacterized protein - Methanospirillum hungatei
           (strain JF-1 / DSM 864)
          Length = 217

 Score = 32.3 bits (70), Expect = 8.7
 Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
 Frame = -1

Query: 365 FHYFSVISCPEKH*N*NITLIFGLIIRACFYNIT-YLYYLYLQSNAISKFLTT*LFYIYI 189
           FH F  I   ++     I++ FGL+I   F  IT +LY ++ +++ I+ FL T +F+I I
Sbjct: 78  FHIFHQIKKVDRR---YISIHFGLLILIIFIPITSHLYQIFEENSIIAFFLHTNIFFISI 134


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 452,496,476
Number of Sequences: 1657284
Number of extensions: 7551469
Number of successful extensions: 13622
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13609
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41073165837
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)