Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20101
         (590 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   5.2  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    21   6.8  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    21   9.0  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    21   9.0  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    21   9.0  

>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -2

Query: 229 SQNSLLHNYFIYIYIKVKLYTKRYGRKLN 143
           S + +L NYFI++Y    +  +R+  +L+
Sbjct: 13  STSFILINYFIFLYFNSLVRFRRFTIELD 41


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -1

Query: 206 LFYIYIH*S*TIHETLRKKAKYF 138
           LF+IY+H S T    L K    F
Sbjct: 134 LFFIYVHPSATFSLDLNKVVSVF 156


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 568 NYLCLYCNNH 539
           NY  LYCNN+
Sbjct: 95  NYKKLYCNNY 104


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 568 NYLCLYCNNH 539
           NY  LYCNN+
Sbjct: 95  NYKKLYCNNY 104


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 568 NYLCLYCNNH 539
           NY  LYCNN+
Sbjct: 95  NYKKLYCNNY 104


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,768
Number of Sequences: 438
Number of extensions: 2464
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)