Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20100
(613 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_06_0127 - 11027692-11027826,11027925-11027993,11029925-110300... 94 7e-20
03_02_0244 + 6750973-6751041,6751216-6751258,6751349-6751410,675... 91 6e-19
03_06_0198 - 32299480-32299643,32300084-32300126,32300843-323009... 86 2e-17
12_01_0662 + 5601147-5601176,5601419-5601517,5601601-5601651,560... 83 1e-16
08_02_0565 + 18751383-18751676,18751739-18751825,18752593-18752895 60 2e-16
01_03_0243 + 14154122-14154190,14154373-14154415,14154491-141545... 82 3e-16
01_06_1282 + 35972234-35972244,35972451-35972522,35972714-359727... 41 9e-04
03_06_0413 + 33756151-33756475,33756837-33756945,33757004-337570... 36 0.025
05_05_0116 - 22496535-22496576,22496974-22497058,22497468-224975... 36 0.033
02_02_0646 + 12606569-12606582,12608702-12608750,12609387-126095... 33 0.13
02_05_0967 - 33148283-33148524,33148602-33148881,33148959-331491... 30 1.7
09_06_0038 - 20415363-20415883,20415917-20416596,20416858-204169... 28 6.7
02_02_0119 + 6978697-6979045,6979519-6979581,6979757-6979866,697... 28 6.7
09_04_0232 - 15882589-15882720,15882799-15882889,15882987-158830... 27 8.9
05_02_0053 - 6152204-6152329,6152817-6152981,6154698-6154883,615... 27 8.9
>10_06_0127 -
11027692-11027826,11027925-11027993,11029925-11030011,
11030146-11030286
Length = 143
Score = 94.3 bits (224), Expect = 7e-20
Identities = 39/79 (49%), Positives = 60/79 (75%)
Frame = +2
Query: 254 NYKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHADAAHQV 433
NYK++YR YA+L+F+ VD+ E+EL IL+ I + VET+D+ F NVCELD++FH + H +
Sbjct: 55 NYKVVYRRYASLFFLVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMFHLEKVHFM 114
Query: 434 LDELVMGGMVLQTNMAEIL 490
L+E+VM G +++T+ IL
Sbjct: 115 LEEMVMNGCIVETSKQNIL 133
Score = 33.1 bits (72), Expect = 0.18
Identities = 12/50 (24%), Positives = 31/50 (62%)
Frame = +3
Query: 81 IKAILVFNNHGKPRLSKFYQYFNEDMQQQIIKETFQLVSKRDDNVCNFLE 230
I+ +++ N G+ R++++Y++ + D ++ + E + R D+ C+F+E
Sbjct: 3 IRFVVMVNKQGQTRVAQYYEHLSVDERRALEGEIVRKCLARTDHQCSFVE 52
>03_02_0244 +
6750973-6751041,6751216-6751258,6751349-6751410,
6751779-6751875,6752380-6752450,6752503-6752586,
6753040-6753294
Length = 226
Score = 91.1 bits (216), Expect = 6e-19
Identities = 38/55 (69%), Positives = 49/55 (89%)
Frame = +2
Query: 260 KLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHADAA 424
KL+Y+H ATLYFVF DSSE+EL +LDL+QVFVETLD+CF+NVCELD++F+ + A
Sbjct: 61 KLVYKHLATLYFVFVFDSSENELAVLDLVQVFVETLDRCFKNVCELDIVFNFNKA 115
Score = 56.8 bits (131), Expect = 1e-08
Identities = 24/57 (42%), Positives = 38/57 (66%)
Frame = +3
Query: 78 MIKAILVFNNHGKPRLSKFYQYFNEDMQQQIIKETFQLVSKRDDNVCNFLEGGSLIG 248
MI+A++V + GKPRL KFY Y + Q +++ FQL+S R D+V NF++ ++ G
Sbjct: 1 MIQAVMVMSTQGKPRLLKFYSYQPPEKHQDLVRGVFQLLSARPDSVSNFVKVDAIFG 57
>03_06_0198 -
32299480-32299643,32300084-32300126,32300843-32300929,
32301063-32301098,32301187-32301295,32301408-32301499,
32302029-32302115,32303887-32304222
Length = 317
Score = 86.2 bits (204), Expect = 2e-17
Identities = 36/89 (40%), Positives = 62/89 (69%)
Frame = +2
Query: 245 WRFNYKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHADAA 424
W+ YK++YR YA+LYF C+D+ ++EL +L++I FVE LD+ F +VCELDLIF+ A
Sbjct: 163 WK-GYKVVYRRYASLYFCMCIDAEDNELEVLEIIHHFVEVLDRYFGSVCELDLIFNFHKA 221
Query: 425 HQVLDELVMGGMVLQTNMAEILCRLQEQI 511
+ +LDE+++ G + +++ + + Q+
Sbjct: 222 YYILDEILIAGELQESSKKNVARLIAAQL 250
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/50 (32%), Positives = 30/50 (60%)
Frame = +3
Query: 81 IKAILVFNNHGKPRLSKFYQYFNEDMQQQIIKETFQLVSKRDDNVCNFLE 230
I +L+ + GK RL+K+Y + + + ++I+E L+ R +CNF+E
Sbjct: 113 INFVLLISRQGKVRLTKWYSPYTQKERTKVIRELSGLILTRGPKLCNFVE 162
>12_01_0662 +
5601147-5601176,5601419-5601517,5601601-5601651,
5602822-5602995,5603869-5603928,5604759-5604800
Length = 151
Score = 83.4 bits (197), Expect = 1e-16
Identities = 37/83 (44%), Positives = 56/83 (67%)
Frame = +2
Query: 257 YKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHADAAHQVL 436
+K+IYR YA L+F CVD +++EL L+ I +FVE LD F NVCELDL+F+ + +L
Sbjct: 64 HKVIYRRYAGLFFSMCVDITDNELAYLECIHLFVEILDHFFSNVCELDLVFNFHKVYLIL 123
Query: 437 DELVMGGMVLQTNMAEILCRLQE 505
DE ++ G + +T+ I+ R+ E
Sbjct: 124 DEFILAGELQETSKRAIIERMGE 146
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +3
Query: 75 EMIKAILVFNNHGKPRLSKFYQYFNEDMQQQIIKETFQLVSKRDDNVCNFLE 230
+ I+ IL+ N GK RL+K+Y + + ++ E +LV RD NF+E
Sbjct: 9 QQIRFILLQNRQGKTRLAKYYVPLEDSEKHKVEYEVHRLVVNRDPKFTNFVE 60
>08_02_0565 + 18751383-18751676,18751739-18751825,18752593-18752895
Length = 227
Score = 59.7 bits (138), Expect(2) = 2e-16
Identities = 25/45 (55%), Positives = 36/45 (80%)
Frame = +2
Query: 254 NYKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENV 388
NYK++YR YA+L+F+ VD+ E+EL IL+ I +FVET+D+ F NV
Sbjct: 106 NYKVVYRRYASLFFLVGVDNDENELAILEFIHLFVETMDRHFGNV 150
Score = 43.2 bits (97), Expect(2) = 2e-16
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +2
Query: 389 CELDLIFHADAAHQVLDELVMGGMVLQTNMAEILCRLQ 502
CELD++FH + H +L+E+VM G +++T+ IL +Q
Sbjct: 184 CELDIMFHLEKVHFMLEEMVMNGCIVETSKQNILAPIQ 221
>01_03_0243 +
14154122-14154190,14154373-14154415,14154491-14154552,
14155214-14155310,14157663-14157733,14158338-14158694
Length = 232
Score = 82.2 bits (194), Expect = 3e-16
Identities = 35/59 (59%), Positives = 47/59 (79%)
Frame = +2
Query: 260 KLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHADAAHQVL 436
KLIY+H ATLY F D SE+EL +LDL+QVFVETLD+CF+NVCEL ++F+ + A + +
Sbjct: 61 KLIYKHLATLYLGFVFDGSENELAVLDLVQVFVETLDRCFKNVCELHIVFNFNKAGETV 119
Score = 58.8 bits (136), Expect = 3e-09
Identities = 24/57 (42%), Positives = 39/57 (68%)
Frame = +3
Query: 78 MIKAILVFNNHGKPRLSKFYQYFNEDMQQQIIKETFQLVSKRDDNVCNFLEGGSLIG 248
MI+A++V + GKPRL KFY Y + Q++++ FQL+S R D+V NF++ ++ G
Sbjct: 1 MIQAVMVMSTQGKPRLLKFYSYHAPEKHQELVRAVFQLLSARPDSVSNFVKVDAIFG 57
>01_06_1282 +
35972234-35972244,35972451-35972522,35972714-35972747,
35973247-35973360,35974833-35975036,35975290-35975449,
35976093-35976240,35976345-35976422,35976854-35976938,
35977142-35977213
Length = 325
Score = 40.7 bits (91), Expect = 9e-04
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +2
Query: 254 NYKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFEN-VCELDLIFHADAAHQ 430
+Y ++Y+ L+F E+EL + ++Q F E +D N V + + D
Sbjct: 206 SYFVVYKFIQDLHFFVTGGDEENELILASVLQGFSEAIDYLLRNKVHRRAALENLDLIFL 265
Query: 431 VLDELVMGGMVLQTNMAEIL 490
LDE+V GG+VL+T+ IL
Sbjct: 266 CLDEVVDGGIVLETDAKAIL 285
>03_06_0413 +
33756151-33756475,33756837-33756945,33757004-33757058,
33757059-33757094,33757196-33757282,33757737-33757808
Length = 227
Score = 35.9 bits (79), Expect = 0.025
Identities = 15/35 (42%), Positives = 25/35 (71%)
Frame = +2
Query: 386 VCELDLIFHADAAHQVLDELVMGGMVLQTNMAEIL 490
VCELDLIF+ A+ +LDE+++ G + ++N +L
Sbjct: 164 VCELDLIFNFHKAYFILDEVLIAGELQESNKKAVL 198
>05_05_0116 -
22496535-22496576,22496974-22497058,22497468-22497545,
22497656-22497803,22498612-22498771,22499056-22499058
Length = 171
Score = 35.5 bits (78), Expect = 0.033
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +2
Query: 263 LIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCF-ENVCELDLIFHADAAHQVLD 439
++Y+ L+F E+EL + ++Q F + +D NV + + + D LD
Sbjct: 65 VVYKFIQDLHFFVTGGEEENELILASVLQGFTDAVDIILRNNVDKRTALENLDLILLCLD 124
Query: 440 ELVMGGMVLQT 472
E+V GG+VL+T
Sbjct: 125 EIVDGGIVLET 135
>02_02_0646 +
12606569-12606582,12608702-12608750,12609387-12609546,
12610372-12610519,12610610-12610687,12611935-12612019,
12612098-12612157
Length = 197
Score = 33.5 bits (73), Expect = 0.13
Identities = 19/74 (25%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +2
Query: 257 YKLIYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFE-NVCELDLIFHADAAHQV 433
Y ++Y+ L+F E+EL I +++Q F +++ +V + + + D
Sbjct: 83 YIVVYKFVQDLHFFVTAGDDENELIIANVLQGFSDSVGLLLRGDVEKRTALENLDLILLC 142
Query: 434 LDELVMGGMVLQTN 475
+DE+V GG++L+T+
Sbjct: 143 IDEIVDGGIILETD 156
>02_05_0967 -
33148283-33148524,33148602-33148881,33148959-33149151,
33149244-33149324,33149395-33149520,33149758-33150137,
33150367-33150394,33150816-33150979,33151920-33152039,
33152168-33152416
Length = 620
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -2
Query: 588 GKIHAFDCRDSSGRAADMPGLSFLHFICS*SLQSI 484
GK+ F +DS+ + D+ +FL+ IC ++Q I
Sbjct: 346 GKVLTFSAQDSTYKVFDLKNYNFLYSICDKNIQEI 380
>09_06_0038 -
20415363-20415883,20415917-20416596,20416858-20416911,
20417440-20417489,20417665-20417800,20419030-20419128,
20419411-20419676
Length = 601
Score = 27.9 bits (59), Expect = 6.7
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Frame = -3
Query: 596 VAAARFMLLTAETALAGQLICRASAFCILSAPEACRVSQPCLSAAPCLPSRAHPAPDGPH 417
VAAA + +A AG + SA SAP A S P S AP PAP PH
Sbjct: 39 VAAASSSSSASSSAAAGSSVAMVSA----SAPAAS--SSPSPSPAPA------PAPSSPH 86
Query: 416 -QRGRSSPAHRHSQSIYLK-------SLQIPV*DLVYRVRSPMNQRRTQNIRS 282
R + PA + + +L+ S+ + V ++ ++SP ++R+ + + S
Sbjct: 87 SDRKVAGPAIQTEDTGFLRANRLCVQSVDMIVGEIRGGIKSPWSRRKRKRVLS 139
>02_02_0119 +
6978697-6979045,6979519-6979581,6979757-6979866,
6979969-6980154,6980266-6980361,6980493-6980564,
6980798-6980909,6982448-6982534,6982680-6983872
Length = 755
Score = 27.9 bits (59), Expect = 6.7
Identities = 21/73 (28%), Positives = 29/73 (39%)
Frame = -3
Query: 611 ASYPGVAAARFMLLTAETALAGQLICRASAFCILSAPEACRVSQPCLSAAPCLPSRAHPA 432
AS+PG + + GQ ++ +A + S P AAP + A PA
Sbjct: 684 ASHPGYGQQQSYGDPYGSGSYGQPAAYSTEATTAAASQDQSASAPATGAAPA--TTAAPA 741
Query: 431 PDGPHQRGRSSPA 393
P P G SPA
Sbjct: 742 PTAPENSGAQSPA 754
>09_04_0232 -
15882589-15882720,15882799-15882889,15882987-15883087,
15883494-15883592,15883693-15883830,15883918-15884508,
15884819-15884989,15885068-15885203,15885561-15885592,
15886280-15886336,15886434-15886686,15886762-15886850,
15887181-15887234,15887498-15887689,15887777-15887938
Length = 765
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -3
Query: 482 QPCLSAAPCLPSRAHPAPDGPHQRGRSSPAHRHS 381
+P L AAP + + PA H++ S P+H S
Sbjct: 522 KPNLPAAPPVKHNSVPAAPATHRKSTSGPSHAQS 555
>05_02_0053 -
6152204-6152329,6152817-6152981,6154698-6154883,
6155055-6155078,6155649-6155822
Length = 224
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -3
Query: 515 ILSAPEACRVSQPCLSAAP-CLPSRAHPAPDGPHQRGRSSPAHR 387
+ ++ AC + S +P CL SRA+P P P S P HR
Sbjct: 14 VTASTPACSSASSSTSPSPHCLLSRANPRP--PRLAAPSPPRHR 55
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,655,387
Number of Sequences: 37544
Number of extensions: 321392
Number of successful extensions: 953
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1466594128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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