Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20099
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    26   0.21 
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   2.6  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   2.6  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   3.4  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   4.5  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   4.5  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   4.5  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   7.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 26.2 bits (55), Expect = 0.21
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +1

Query: 205  NQGKGSIIQNVVNNLIMTEVGTPWSTATSCGSATDSTLSESTSPITLD 348
            NQG+  + Q   N L   +    W   T C     ST++ ST+P+  D
Sbjct: 2256 NQGQLQL-QVCPNGLFWNKDHCDWPENTECHPDASSTMAPSTTPMVPD 2302



 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +1

Query: 274  WSTATSCGSATDSTLSESTSPITLDSSWP 360
            W+T T+  + T    + ST+     ++WP
Sbjct: 1052 WTTTTTRRTTTTRPTTTSTTTRPTTTNWP 1080


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 13/45 (28%), Positives = 18/45 (40%)
 Frame = +3

Query: 336 YNFRLIMAGNFVKLIYRNYNLALKLGPTLDPANERLAYGDGKEKN 470
           Y   L      V L +  YNL+L +    D  N      + +EKN
Sbjct: 169 YTLHLFCVLYVVLLHFLTYNLSLGIKLRYDDVNNLFRIEESEEKN 213


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 13/45 (28%), Positives = 18/45 (40%)
 Frame = +3

Query: 336 YNFRLIMAGNFVKLIYRNYNLALKLGPTLDPANERLAYGDGKEKN 470
           Y   L      V L +  YNL+L +    D  N      + +EKN
Sbjct: 169 YTLHLFCVLYVVLLHFLTYNLSLGIKLRYDDVNNLFRIEESEEKN 213


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 328 YFLTMCCPLPTHSL*QYSMVFRLP 257
           Y  T+  PL    L  Y+M FR+P
Sbjct: 323 YDSTITAPLSNPPLWPYTMYFRMP 346


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = +1

Query: 427 PRTRDLHTAMVRKRTATSSVGSSLPCGKQQECTSRS 534
           P   + +T         SSVGSS P  K  E  SRS
Sbjct: 132 PSATNNNTNFNNNSNGASSVGSSSPFDKLIEEDSRS 167


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = +1

Query: 427 PRTRDLHTAMVRKRTATSSVGSSLPCGKQQECTSRS 534
           P   + +T         SSVGSS P  K  E  SRS
Sbjct: 80  PSATNNNTNFNNNSNGASSVGSSSPFDKLIEEDSRS 115


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = +1

Query: 427 PRTRDLHTAMVRKRTATSSVGSSLPCGKQQECTSRS 534
           P   + +T         SSVGSS P  K  E  SRS
Sbjct: 263 PSATNNNTNFNNNSNGASSVGSSSPFDKLIEEDSRS 298


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 261 SRNTMEYCYKL 293
           SR T E CYKL
Sbjct: 239 SRKTAEMCYKL 249


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.311    0.124    0.349 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,392
Number of Sequences: 336
Number of extensions: 2701
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.4 bits)