Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20099
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    26   1.1  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   3.2  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    24   4.3  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    23   5.7  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    23   5.7  
AY146744-1|AAO12104.1|  176|Anopheles gambiae odorant-binding pr...    23   7.5  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   9.9  

>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 9/42 (21%), Positives = 22/42 (52%)
 Frame = +1

Query: 223 IIQNVVNNLIMTEVGTPWSTATSCGSATDSTLSESTSPITLD 348
           +++ ++++L        WS  ++ GS   +T +   +P+T D
Sbjct: 435 VLERIISDLFPEHPPCDWSQLSNVGSVEGATTTAGIAPVTDD 476


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 300 RPTACSSTPWCSDFRHDQVVN 238
           RP ACS+   C+  RHD   N
Sbjct: 404 RPPACSTRLHCTMIRHDDDSN 424


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
 Frame = +3

Query: 138 ETVQQHPHR*LRQRCPSELGIRE--PRQGLHHPECS*QPDHDGSRNT 272
           E + ++ H  +R+  PS    R   PR G   P C   P    SR+T
Sbjct: 237 ENIYKNAHASIRKIPPSRRNPRRRSPRSGGRWPSCRSPPARRRSRST 283


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
 Frame = +3

Query: 279 YCYKLWVGNG---QHIVRKYFPYNFRLIMAGNFVKLIYR 386
           Y  K+ +GN    +H  R+Y   N    ++G+FV   +R
Sbjct: 423 YGNKINIGNTYAEEHYYRRYLTANLSSDLSGDFVDAFFR 461


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
 Frame = +3

Query: 279 YCYKLWVGNG---QHIVRKYFPYNFRLIMAGNFVKLIYR 386
           Y  K+ +GN    +H  R+Y   N    ++G+FV   +R
Sbjct: 423 YGNKINIGNTYAEEHYYRRYLTANLSSDLSGDFVDAFFR 461


>AY146744-1|AAO12104.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP8 protein.
          Length = 176

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +2

Query: 467 EQRPHQLEVHYLVGNNKSVLQDP 535
           E  PH+  VH  + ++ ++++DP
Sbjct: 113 EGAPHEANVHAQMQHSNAIVEDP 135


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -3

Query: 104 TADISATPALTASTHDANTTRN 39
           TAD S++PA ++ TH   T R+
Sbjct: 236 TADPSSSPAYSSITHYEPTARS 257


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.311    0.124    0.349 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 599,969
Number of Sequences: 2352
Number of extensions: 11722
Number of successful extensions: 24
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)