Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20099
         (598 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2265|AAF53230.1|  255|Drosophila melanogaster CG16800-P...    29   3.6  
AY102651-1|AAM27480.1|  602|Drosophila melanogaster GH01517p pro...    29   6.3  
AE014297-1927|AAF55121.3|  602|Drosophila melanogaster CG33485-P...    29   6.3  
AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA...    29   6.3  
AY095035-1|AAM11363.1|  676|Drosophila melanogaster LD26392p pro...    28   8.4  
AE014298-820|AAF46102.2|  676|Drosophila melanogaster CG3726-PA ...    28   8.4  

>AE014134-2265|AAF53230.1|  255|Drosophila melanogaster CG16800-PA
           protein.
          Length = 255

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -2

Query: 102 RGHFSDAGADGEHARREHHEKFHYDS 25
           +GH    G  GEH   E HEK H  S
Sbjct: 78  KGHHDKEGKKGEHGEEEGHEKKHKHS 103


>AY102651-1|AAM27480.1|  602|Drosophila melanogaster GH01517p
           protein.
          Length = 602

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 19/54 (35%), Positives = 23/54 (42%)
 Frame = +3

Query: 147 QQHPHR*LRQRCPSELGIREPRQGLHHPECS*QPDHDGSRNTMEYCYKLWVGNG 308
           QQH    LRQR  +    +  RQ  HH     QP+   S      C +LW G G
Sbjct: 11  QQHQRTNLRQRAAAVATSKARRQRQHHL----QPESTDSPPYSTDCIRLWPGCG 60


>AE014297-1927|AAF55121.3|  602|Drosophila melanogaster CG33485-PA
           protein.
          Length = 602

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 19/54 (35%), Positives = 23/54 (42%)
 Frame = +3

Query: 147 QQHPHR*LRQRCPSELGIREPRQGLHHPECS*QPDHDGSRNTMEYCYKLWVGNG 308
           QQH    LRQR  +    +  RQ  HH     QP+   S      C +LW G G
Sbjct: 11  QQHQRTNLRQRAAAVATSKARRQRQHHL----QPESTDSPPYSTDCIRLWPGCG 60


>AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA
           protein.
          Length = 2284

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -2

Query: 339 YRGSTF*QCAVRCRPTACSSTPWCS 265
           Y GST  +C  R RPT  +S P CS
Sbjct: 499 YPGSTDPECQPRTRPTITTSQPRCS 523


>AY095035-1|AAM11363.1|  676|Drosophila melanogaster LD26392p
           protein.
          Length = 676

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +1

Query: 184 RQSLEYENQGKGSIIQNVVNNLIMTEVGTPWSTATSCGSATDSTLSE 324
           RQ L ++ Q +  ++Q+  ++      G  WS     GSAT   LS+
Sbjct: 306 RQRLRHQQQQQQQLLQSESSDQEQPAAGQDWSNLEPNGSATPKLLSD 352


>AE014298-820|AAF46102.2|  676|Drosophila melanogaster CG3726-PA
           protein.
          Length = 676

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +1

Query: 184 RQSLEYENQGKGSIIQNVVNNLIMTEVGTPWSTATSCGSATDSTLSE 324
           RQ L ++ Q +  ++Q+  ++      G  WS     GSAT   LS+
Sbjct: 306 RQRLRHQQQQQQQLLQSESSDQEQPAAGQDWSNLEPNGSATPKLLSD 352


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.311    0.124    0.349 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,758,101
Number of Sequences: 53049
Number of extensions: 536877
Number of successful extensions: 1699
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1695
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)