Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20099
(598 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82271-6|CAB05213.1| 1091|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z73102-19|CAA97421.1| 1091|Caenorhabditis elegans Hypothetical p... 30 1.4
U42846-1|AAA83600.2| 872|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z35663-2|CAA84735.2| 335|Caenorhabditis elegans Hypothetical pr... 29 3.3
U50071-6|AAQ91911.1| 1004|Caenorhabditis elegans Uncoordinated p... 29 3.3
U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated p... 29 3.3
U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated p... 29 3.3
U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated p... 29 3.3
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 29 3.3
U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin pr... 29 3.3
U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin pr... 29 3.3
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 29 3.3
U23524-6|AAC46820.1| 383|Caenorhabditis elegans Hypothetical pr... 29 3.3
U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein. 29 3.3
AC024845-2|AAF60851.1| 324|Caenorhabditis elegans Hypothetical ... 29 3.3
Z81476-4|CAB03923.1| 707|Caenorhabditis elegans Hypothetical pr... 28 4.4
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 28 4.4
AF078157-2|AAN84818.1| 176|Caenorhabditis elegans Hypothetical ... 28 5.8
AF078157-1|AAG24071.1| 235|Caenorhabditis elegans Hypothetical ... 28 5.8
>Z82271-6|CAB05213.1| 1091|Caenorhabditis elegans Hypothetical
protein F54E12.2 protein.
Length = 1091
Score = 29.9 bits (64), Expect = 1.4
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +1
Query: 175 SAVRQSLEYENQGKGSIIQNVVNNLIMTEVGTPWSTATSCGS--ATDSTLSESTSPITLD 348
S RQS E ++Q + S++ + ++ V TP STA+ C + AT + S+S + L
Sbjct: 32 SPQRQSKESDDQ-EDSVVDESMKSVNSPIVNTPSSTASHCTNSFATSTPKSKSNASTRLG 90
Query: 349 SSW 357
SS+
Sbjct: 91 SSY 93
>Z73102-19|CAA97421.1| 1091|Caenorhabditis elegans Hypothetical
protein F54E12.2 protein.
Length = 1091
Score = 29.9 bits (64), Expect = 1.4
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +1
Query: 175 SAVRQSLEYENQGKGSIIQNVVNNLIMTEVGTPWSTATSCGS--ATDSTLSESTSPITLD 348
S RQS E ++Q + S++ + ++ V TP STA+ C + AT + S+S + L
Sbjct: 32 SPQRQSKESDDQ-EDSVVDESMKSVNSPIVNTPSSTASHCTNSFATSTPKSKSNASTRLG 90
Query: 349 SSW 357
SS+
Sbjct: 91 SSY 93
>U42846-1|AAA83600.2| 872|Caenorhabditis elegans Hypothetical
protein T19D2.1 protein.
Length = 872
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +3
Query: 183 PSELGIREPRQGLHHPECS*QPDHDGSRNTMEYCYKLWVGNGQHIVRKYFP 335
P +L + + + H EC DG + C +W GNG+ ++R P
Sbjct: 366 PGQLFTLDEQCEIFHGECWKHELKDG-QTMQNICQMVWCGNGEGVIRTAHP 415
>Z35663-2|CAA84735.2| 335|Caenorhabditis elegans Hypothetical
protein T04A8.2 protein.
Length = 335
Score = 28.7 bits (61), Expect = 3.3
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = -1
Query: 598 VFECCSQSSNLVSSTGCTLVLWILKYTLVVSHKVMNFQLMRSLFFSLPSPYASLSF 431
+FEC S +V T W L+ ++ ++N L+ ++ F YAS SF
Sbjct: 16 IFECNSNYDTIVEVTK-----WFLQIAYLIPGGILNILLLYTILFKNSEIYASSSF 66
>U50071-6|AAQ91911.1| 1004|Caenorhabditis elegans Uncoordinated
protein 44, isoform g protein.
Length = 1004
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -2
Query: 255 HDQVVNYILDDGALALVLVFQALTDSAVVV-TGEDAVVQFLLE 130
H++VV Y+L GA + T AV + G D VV LLE
Sbjct: 144 HEEVVKYLLKHGANQALSTEDGFTPLAVALQQGHDRVVAVLLE 186
>U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated
protein 44, isoform a protein.
Length = 2039
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -2
Query: 255 HDQVVNYILDDGALALVLVFQALTDSAVVV-TGEDAVVQFLLE 130
H++VV Y+L GA + T AV + G D VV LLE
Sbjct: 144 HEEVVKYLLKHGANQALSTEDGFTPLAVALQQGHDRVVAVLLE 186
>U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated
protein 44, isoform e protein.
Length = 1841
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -2
Query: 255 HDQVVNYILDDGALALVLVFQALTDSAVVV-TGEDAVVQFLLE 130
H++VV Y+L GA + T AV + G D VV LLE
Sbjct: 144 HEEVVKYLLKHGANQALSTEDGFTPLAVALQQGHDRVVAVLLE 186
>U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated
protein 44, isoform c protein.
Length = 1867
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -2
Query: 255 HDQVVNYILDDGALALVLVFQALTDSAVVV-TGEDAVVQFLLE 130
H++VV Y+L GA + T AV + G D VV LLE
Sbjct: 144 HEEVVKYLLKHGANQALSTEDGFTPLAVALQQGHDRVVAVLLE 186
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -2
Query: 255 HDQVVNYILDDGALALVLVFQALTDSAVVV-TGEDAVVQFLLE 130
H++VV Y+L GA + T AV + G D VV LLE
Sbjct: 144 HEEVVKYLLKHGANQALSTEDGFTPLAVALQQGHDRVVAVLLE 186
>U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin
protein.
Length = 1815
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -2
Query: 255 HDQVVNYILDDGALALVLVFQALTDSAVVV-TGEDAVVQFLLE 130
H++VV Y+L GA + T AV + G D VV LLE
Sbjct: 144 HEEVVKYLLKHGANQALSTEDGFTPLAVALQQGHDRVVAVLLE 186
>U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin
protein.
Length = 1867
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -2
Query: 255 HDQVVNYILDDGALALVLVFQALTDSAVVV-TGEDAVVQFLLE 130
H++VV Y+L GA + T AV + G D VV LLE
Sbjct: 144 HEEVVKYLLKHGANQALSTEDGFTPLAVALQQGHDRVVAVLLE 186
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -2
Query: 255 HDQVVNYILDDGALALVLVFQALTDSAVVV-TGEDAVVQFLLE 130
H++VV Y+L GA + T AV + G D VV LLE
Sbjct: 144 HEEVVKYLLKHGANQALSTEDGFTPLAVALQQGHDRVVAVLLE 186
>U23524-6|AAC46820.1| 383|Caenorhabditis elegans Hypothetical
protein C29F5.1 protein.
Length = 383
Score = 28.7 bits (61), Expect = 3.3
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = -3
Query: 332 EVLSDNVLSVADPQLVAVLHG-VPTSVMIRLLTTFWMMEPLPWFSYSKL 189
EVL + S +P + V +G VP V +++LTT+ P+F++++L
Sbjct: 226 EVLPEKKKSDMNPDIEVVNYGEVPHDVPLQVLTTYPQGAGFPFFTWAQL 274
>U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein.
Length = 1786
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -2
Query: 255 HDQVVNYILDDGALALVLVFQALTDSAVVV-TGEDAVVQFLLE 130
H++VV Y+L GA + T AV + G D VV LLE
Sbjct: 144 HEEVVKYLLKHGANQALSTEDGFTPLAVALQQGHDRVVAVLLE 186
>AC024845-2|AAF60851.1| 324|Caenorhabditis elegans Hypothetical
protein Y65B4BL.4 protein.
Length = 324
Score = 28.7 bits (61), Expect = 3.3
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Frame = +1
Query: 181 VRQSLEYENQGKGSIIQNVVNNL--IMTEVGTPWSTATSC--GSATDSTLSESTSPIT 342
+R+ QGK S+ N+ ++L + E+G+P S +++C +AT S S STS T
Sbjct: 238 IRKQTALRFQGKASV--NLFSDLTAVTNELGSPSSPSSNCVISTATTSIPSTSTSSTT 293
>Z81476-4|CAB03923.1| 707|Caenorhabditis elegans Hypothetical
protein C25F9.5 protein.
Length = 707
Score = 28.3 bits (60), Expect = 4.4
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 446 IRRW*GKEQRPHQLEVHYLVGNNKSVLQD 532
+ RW E+ H+ H+L GNN + +D
Sbjct: 367 MHRWCLTEENTHRFSAHFLKGNNDKIGED 395
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 256 TEVGTPWSTATSCGSATDSTLSESTSPITLDSS 354
T T ST S ++TDST +EST+ T +S+
Sbjct: 190 TTTTTATSTTESTSTSTDSTTTESTTESTTEST 222
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 256 TEVGTPWSTATSCGSATDSTLSESTSPITLDSS 354
T T ST S ++TDST +EST+ T +S+
Sbjct: 210 TTESTTESTTESTSTSTDSTTTESTTESTTEST 242
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 256 TEVGTPWSTATSCGSATDSTLSESTSPITLDSS 354
T T +T S ++TDST +EST+ T +S+
Sbjct: 242 TSTSTDSTTTESTSTSTDSTTTESTTESTTEST 274
>AF078157-2|AAN84818.1| 176|Caenorhabditis elegans Hypothetical
protein F25E5.8b protein.
Length = 176
Score = 27.9 bits (59), Expect = 5.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -2
Query: 90 SDAGADGEHARREHHEKFHYDSCLF 16
S+ G G H EHH K H+ L+
Sbjct: 36 SEEGTSGSHKPEEHHHKEHHGHSLY 60
>AF078157-1|AAG24071.1| 235|Caenorhabditis elegans Hypothetical
protein F25E5.8a protein.
Length = 235
Score = 27.9 bits (59), Expect = 5.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -2
Query: 90 SDAGADGEHARREHHEKFHYDSCLF 16
S+ G G H EHH K H+ L+
Sbjct: 36 SEEGTSGSHKPEEHHHKEHHGHSLY 60
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.311 0.124 0.349
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,994,157
Number of Sequences: 27780
Number of extensions: 264821
Number of successful extensions: 611
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 611
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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