Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20098
         (563 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY360172-1|AAQ98857.1|  693|Homo sapiens transducer of regulated...    30   6.5  

>AY360172-1|AAQ98857.1|  693|Homo sapiens transducer of regulated
           CREB protein 2 protein.
          Length = 693

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 25/83 (30%), Positives = 36/83 (43%)
 Frame = +3

Query: 306 CELLRCSKLN*SPLRLLLERQRGASSSSCTPVISLTSWPFSEPTDLVASTH*TKCRLSSA 485
           C +L  + L    L         +SSS+ +PV+   S+P S P    AS H  +  LS  
Sbjct: 379 CHVLPTTSLGHPSLSAPALSSSSSSSSTSSPVLGAPSYPASTPG---ASPHHRRVPLSPL 435

Query: 486 LLLXTGNTLHVRRSPPHLPRKLA 554
            LL        RRS   LP++ +
Sbjct: 436 SLL--AGPADARRSQQQLPKQFS 456


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,364,232
Number of Sequences: 237096
Number of extensions: 1434955
Number of successful extensions: 3958
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 3840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3958
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5703349406
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)