Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20097
(372 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL137265-1|CAB70664.1| 992|Homo sapiens hypothetical protein pr... 33 0.29
BC117673-1|AAI17674.1| 905|Homo sapiens CAPRIN2 protein protein. 29 4.8
AY165865-1|AAO18147.1| 2809|Homo sapiens fibrillin-3 short form ... 29 4.8
AY165864-1|AAO18146.1| 2809|Homo sapiens fibrillin-3 short form ... 29 4.8
AY165863-1|AAO18145.1| 2809|Homo sapiens fibrillin-3 short form ... 29 4.8
AB177800-1|BAD16736.1| 2809|Homo sapiens fibrillin 3 protein. 29 4.8
AB177799-1|BAD16735.1| 2809|Homo sapiens fibrillin 3 protein. 29 4.8
AB177798-1|BAD16734.1| 2809|Homo sapiens fibrillin 3 protein. 29 4.8
AB177797-1|BAD16733.1| 2809|Homo sapiens fibrillin 3 protein. 29 4.8
AB058776-1|BAB47502.1| 477|Homo sapiens KIAA1873 protein protein. 29 4.8
AB053450-1|BAB47408.2| 2816|Homo sapiens fibrillin3 protein. 29 4.8
AK125995-1|BAC86384.1| 842|Homo sapiens protein ( Homo sapiens ... 29 6.3
AB028975-1|BAA83004.2| 1456|Homo sapiens KIAA1052 protein protein. 29 6.3
BC100806-1|AAI00807.1| 506|Homo sapiens chromodomain protein, Y... 28 8.4
BC100805-1|AAI00806.1| 506|Homo sapiens chromodomain protein, Y... 28 8.4
BC100804-1|AAI00805.1| 506|Homo sapiens chromodomain protein, Y... 28 8.4
BC100803-1|AAI00804.1| 506|Homo sapiens chromodomain protein, Y... 28 8.4
BC069440-1|AAH69440.1| 506|Homo sapiens chromodomain protein, Y... 28 8.4
BC012317-1|AAH12317.1| 137|Homo sapiens LINCR protein protein. 28 8.4
AY273798-1|AAP83842.1| 506|Homo sapiens chromodomain Y-like pro... 28 8.4
AK127704-1|BAC87093.1| 1366|Homo sapiens protein ( Homo sapiens ... 28 8.4
AK125913-1|BAC86342.1| 628|Homo sapiens protein ( Homo sapiens ... 28 8.4
AK096185-1|BAC04720.1| 506|Homo sapiens protein ( Homo sapiens ... 28 8.4
AJ318887-1|CAC83011.2| 1090|Homo sapiens ASPP1 protein protein. 28 8.4
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 28 8.4
AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein. 28 8.4
AB018314-1|BAA34491.1| 948|Homo sapiens KIAA0771 protein protein. 28 8.4
>AL137265-1|CAB70664.1| 992|Homo sapiens hypothetical protein
protein.
Length = 992
Score = 33.1 bits (72), Expect = 0.29
Identities = 21/51 (41%), Positives = 26/51 (50%)
Frame = +1
Query: 52 LAYGDKDXSRSSNTPIQSKTSDGRSPQLLPPIGKAEIGFSGTPASLRSPTE 204
L DKD S+SS +QSK S G +L PP+ E S P SL + E
Sbjct: 218 LGIEDKDDSQSSQDELQSKQSKGLEERLSPPLPHEERAQS-PPRSLATEEE 267
>BC117673-1|AAI17674.1| 905|Homo sapiens CAPRIN2 protein protein.
Length = 905
Score = 29.1 bits (62), Expect = 4.8
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Frame = +1
Query: 94 PIQSKTSDGRSPQLL----PPIGK-AEIGFSGTPASLRSPTESKARFHA 225
P+Q+ G+ P L PP+ K +E GF PAS S T + A F A
Sbjct: 679 PLQAAIPPGKQPSSLASPNPPMAKGSEQGFQSPPASSSSVTINTAPFQA 727
>AY165865-1|AAO18147.1| 2809|Homo sapiens fibrillin-3 short form
precursor transcript variant 3 protein.
Length = 2809
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 118 GRSPQLLPPIGKAEIGFSGTPASLRSPTESKARFHAGCVP 237
GR L G + G+P L+ P +RFHA C P
Sbjct: 31 GRWDGALEAAGPGRVRRRGSPGILQGPNVCGSRFHAYCCP 70
>AY165864-1|AAO18146.1| 2809|Homo sapiens fibrillin-3 short form
precursor transcript variant 2 protein.
Length = 2809
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 118 GRSPQLLPPIGKAEIGFSGTPASLRSPTESKARFHAGCVP 237
GR L G + G+P L+ P +RFHA C P
Sbjct: 31 GRWDGALEAAGPGRVRRRGSPGILQGPNVCGSRFHAYCCP 70
>AY165863-1|AAO18145.1| 2809|Homo sapiens fibrillin-3 short form
precursor transcript variant 1 protein.
Length = 2809
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 118 GRSPQLLPPIGKAEIGFSGTPASLRSPTESKARFHAGCVP 237
GR L G + G+P L+ P +RFHA C P
Sbjct: 31 GRWDGALEAAGPGRVRRRGSPGILQGPNVCGSRFHAYCCP 70
>AB177800-1|BAD16736.1| 2809|Homo sapiens fibrillin 3 protein.
Length = 2809
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 118 GRSPQLLPPIGKAEIGFSGTPASLRSPTESKARFHAGCVP 237
GR L G + G+P L+ P +RFHA C P
Sbjct: 31 GRWDGALEAAGPGRVRRRGSPGILQGPNVCGSRFHAYCCP 70
>AB177799-1|BAD16735.1| 2809|Homo sapiens fibrillin 3 protein.
Length = 2809
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 118 GRSPQLLPPIGKAEIGFSGTPASLRSPTESKARFHAGCVP 237
GR L G + G+P L+ P +RFHA C P
Sbjct: 31 GRWDGALEAAGPGRVRRRGSPGILQGPNVCGSRFHAYCCP 70
>AB177798-1|BAD16734.1| 2809|Homo sapiens fibrillin 3 protein.
Length = 2809
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 118 GRSPQLLPPIGKAEIGFSGTPASLRSPTESKARFHAGCVP 237
GR L G + G+P L+ P +RFHA C P
Sbjct: 31 GRWDGALEAAGPGRVRRRGSPGILQGPNVCGSRFHAYCCP 70
>AB177797-1|BAD16733.1| 2809|Homo sapiens fibrillin 3 protein.
Length = 2809
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 118 GRSPQLLPPIGKAEIGFSGTPASLRSPTESKARFHAGCVP 237
GR L G + G+P L+ P +RFHA C P
Sbjct: 31 GRWDGALEAAGPGRVRRRGSPGILQGPNVCGSRFHAYCCP 70
>AB058776-1|BAB47502.1| 477|Homo sapiens KIAA1873 protein protein.
Length = 477
Score = 29.1 bits (62), Expect = 4.8
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Frame = +1
Query: 94 PIQSKTSDGRSPQLL----PPIGK-AEIGFSGTPASLRSPTESKARFHA 225
P+Q+ G+ P L PP+ K +E GF PAS S T + A F A
Sbjct: 361 PLQAAIPPGKQPSSLASPNPPMAKGSEQGFQSPPASSSSVTINTAPFQA 409
>AB053450-1|BAB47408.2| 2816|Homo sapiens fibrillin3 protein.
Length = 2816
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 118 GRSPQLLPPIGKAEIGFSGTPASLRSPTESKARFHAGCVP 237
GR L G + G+P L+ P +RFHA C P
Sbjct: 38 GRWDGALEAAGPGRVRRRGSPGILQGPNVCGSRFHAYCCP 77
>AK125995-1|BAC86384.1| 842|Homo sapiens protein ( Homo sapiens
cDNA FLJ44007 fis, clone TESTI4023762. ).
Length = 842
Score = 28.7 bits (61), Expect = 6.3
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = +1
Query: 52 LAYGDKDXSRSSNTPIQSKTSDG---RSPQLLPPIGKAEIGFSGTPASLRSPTE 204
L DKD S+SS +QSK S G R +L PP+ E S P SL + E
Sbjct: 372 LGIEDKDDSQSSQDELQSKQSKGLEERYHRLSPPLPHEERAQS-PPRSLATEEE 424
>AB028975-1|BAA83004.2| 1456|Homo sapiens KIAA1052 protein protein.
Length = 1456
Score = 28.7 bits (61), Expect = 6.3
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = +1
Query: 52 LAYGDKDXSRSSNTPIQSKTSDG---RSPQLLPPIGKAEIGFSGTPASLRSPTE 204
L DKD S+SS +QSK S G R +L PP+ E S P SL + E
Sbjct: 445 LGIEDKDDSQSSQDELQSKQSKGLEERYHRLSPPLPHEERAQS-PPRSLATEEE 497
>BC100806-1|AAI00807.1| 506|Homo sapiens chromodomain protein,
Y-like 2 protein.
Length = 506
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 76 SRSSNTPIQSKTSDGRSPQLLPPIGKAEIGFSGTPAS 186
S + P +SK + + ++ PP+ K + G+SG P+S
Sbjct: 90 SHRPSDPGKSKGTSHKRKRINPPLAKPKKGYSGKPSS 126
>BC100805-1|AAI00806.1| 506|Homo sapiens chromodomain protein,
Y-like 2 protein.
Length = 506
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 76 SRSSNTPIQSKTSDGRSPQLLPPIGKAEIGFSGTPAS 186
S + P +SK + + ++ PP+ K + G+SG P+S
Sbjct: 90 SHRPSDPGKSKGTSHKRKRINPPLAKPKKGYSGKPSS 126
>BC100804-1|AAI00805.1| 506|Homo sapiens chromodomain protein,
Y-like 2 protein.
Length = 506
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 76 SRSSNTPIQSKTSDGRSPQLLPPIGKAEIGFSGTPAS 186
S + P +SK + + ++ PP+ K + G+SG P+S
Sbjct: 90 SHRPSDPGKSKGTSHKRKRINPPLAKPKKGYSGKPSS 126
>BC100803-1|AAI00804.1| 506|Homo sapiens chromodomain protein,
Y-like 2 protein.
Length = 506
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 76 SRSSNTPIQSKTSDGRSPQLLPPIGKAEIGFSGTPAS 186
S + P +SK + + ++ PP+ K + G+SG P+S
Sbjct: 90 SHRPSDPGKSKGTSHKRKRINPPLAKPKKGYSGKPSS 126
>BC069440-1|AAH69440.1| 506|Homo sapiens chromodomain protein,
Y-like 2 protein.
Length = 506
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 76 SRSSNTPIQSKTSDGRSPQLLPPIGKAEIGFSGTPAS 186
S + P +SK + + ++ PP+ K + G+SG P+S
Sbjct: 90 SHRPSDPGKSKGTSHKRKRINPPLAKPKKGYSGKPSS 126
>BC012317-1|AAH12317.1| 137|Homo sapiens LINCR protein protein.
Length = 137
Score = 28.3 bits (60), Expect = 8.4
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Frame = -1
Query: 156 CLPNWW*KLRRSSIRCLRLDRSITT---SGXVLISIRKARIAPFRHITCQNRPCP 1
C P W + RR CLR RS+ T SG + R P +C R CP
Sbjct: 77 CAPTWRSRARRGRPCCLRAARSLGTWSASGWTAAAASSPRSTPAAG-SCCVRACP 130
>AY273798-1|AAP83842.1| 506|Homo sapiens chromodomain Y-like
protein 2 protein.
Length = 506
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 76 SRSSNTPIQSKTSDGRSPQLLPPIGKAEIGFSGTPAS 186
S + P +SK + + ++ PP+ K + G+SG P+S
Sbjct: 90 SHRPSDPGKSKGTSHKRKRINPPLAKPKKGYSGKPSS 126
>AK127704-1|BAC87093.1| 1366|Homo sapiens protein ( Homo sapiens cDNA
FLJ45804 fis, clone NT2RI3005923, weakly similar to
Cadherin-related tumor suppressor precursor. ).
Length = 1366
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +1
Query: 10 TVLARDMSEGSNAGLAYGDKDXSRSSNTPIQSKTSDGR 123
TV A+D EG+NA + Y S + + P++ KT+ G+
Sbjct: 1319 TVFAKDPDEGNNAEVTY---SVSSARHMPLKGKTAFGK 1353
>AK125913-1|BAC86342.1| 628|Homo sapiens protein ( Homo sapiens
cDNA FLJ43925 fis, clone TESTI4012505, weakly similar
to Tumor suppressor p53-binding protein 2. ).
Length = 628
Score = 28.3 bits (60), Expect = 8.4
Identities = 21/73 (28%), Positives = 30/73 (41%)
Frame = +1
Query: 19 ARDMSEGSNAGLAYGDKDXSRSSNTPIQSKTSDGRSPQLLPPIGKAEIGFSGTPASLRSP 198
A S+ +N G K S SS P+Q +D + P + + + + P S P
Sbjct: 244 AHGRSKSANDGNWPTLKQNSSSSVKPVQVAGADWKDPSVEGSVKQGTVSSQPVPFSALGP 303
Query: 199 TESKARFHAGCVP 237
TE K G VP
Sbjct: 304 TE-KPGIEIGKVP 315
>AK096185-1|BAC04720.1| 506|Homo sapiens protein ( Homo sapiens
cDNA FLJ38866 fis, clone MESAN2013022, moderately
similar to Homo sapiens testis-specific chromodomain
Y-like protein (CDYL) mRNA. ).
Length = 506
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 76 SRSSNTPIQSKTSDGRSPQLLPPIGKAEIGFSGTPAS 186
S + P +SK + + ++ PP+ K + G+SG P+S
Sbjct: 90 SHRPSDPGKSKGTSHKRKRINPPLAKPKKGYSGKPSS 126
>AJ318887-1|CAC83011.2| 1090|Homo sapiens ASPP1 protein protein.
Length = 1090
Score = 28.3 bits (60), Expect = 8.4
Identities = 21/73 (28%), Positives = 30/73 (41%)
Frame = +1
Query: 19 ARDMSEGSNAGLAYGDKDXSRSSNTPIQSKTSDGRSPQLLPPIGKAEIGFSGTPASLRSP 198
A S+ +N G K S SS P+Q +D + P + + + + P S P
Sbjct: 377 AHGRSKSANDGNWPTLKQNSSSSVKPVQVAGADWKDPSVEGSVKQGTVSSQPVPFSALGP 436
Query: 199 TESKARFHAGCVP 237
TE K G VP
Sbjct: 437 TE-KPGIEIGKVP 448
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 124 SPQLLPPIGKAEIGFSGTPASLRSPT 201
+P P ++G SGTP+SL SPT
Sbjct: 13137 APTSTPGTSTVDLGTSGTPSSLPSPT 13162
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 124 SPQLLPPIGKAEIGFSGTPASLRSPT 201
+P P ++G SGTP+SL SPT
Sbjct: 14073 APTSTPGTSTVDLGTSGTPSSLPSPT 14098
>AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.
Length = 6995
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 124 SPQLLPPIGKAEIGFSGTPASLRSPT 201
+P P ++G SGTP+SL SPT
Sbjct: 4687 APTSTPGTSTVDLGTSGTPSSLPSPT 4712
>AB018314-1|BAA34491.1| 948|Homo sapiens KIAA0771 protein protein.
Length = 948
Score = 28.3 bits (60), Expect = 8.4
Identities = 21/73 (28%), Positives = 30/73 (41%)
Frame = +1
Query: 19 ARDMSEGSNAGLAYGDKDXSRSSNTPIQSKTSDGRSPQLLPPIGKAEIGFSGTPASLRSP 198
A S+ +N G K S SS P+Q +D + P + + + + P S P
Sbjct: 235 AHGRSKSANDGNWPTLKQNSSSSVKPVQVAGADWKDPSVEGSVKQGTVSSQPVPFSALGP 294
Query: 199 TESKARFHAGCVP 237
TE K G VP
Sbjct: 295 TE-KPGIEIGKVP 306
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,996,114
Number of Sequences: 237096
Number of extensions: 1234506
Number of successful extensions: 3720
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 3579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3720
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2421480012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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